Conservation of cofitness between Psyr_4564 and Psyr_3208 in Pseudomonas syringae pv. syringae B728a

60 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_4564 Biotin--acetyl-CoA-carboxylase ligase 1.0 Psyr_3208 NADH dehydrogenase subunit M 0.40 15
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_4564 Biotin--acetyl-CoA-carboxylase ligase 1.00 Psyr_3208 NADH dehydrogenase subunit M — —
Pseudomonas fluorescens FW300-N1B4 0.68 Pf1N1B4_2565 Biotin operon repressor / Biotin-protein ligase (EC 6.3.4.15) 0.85 Pf1N1B4_4029 NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) — —
Pseudomonas fluorescens GW456-L13 0.68 PfGW456L13_1238 Biotin operon repressor / Biotin-protein ligase (EC 6.3.4.15) 0.86 PfGW456L13_2622 NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) — —
Pseudomonas fluorescens FW300-N2E2 0.67 Pf6N2E2_4841 Biotin operon repressor / Biotin-protein ligase (EC 6.3.4.15) 0.88 Pf6N2E2_266 NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) — —
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_14540 biotin--protein ligase 0.88 AO356_22015 NADH:ubiquinone oxidoreductase subunit M — —
Pseudomonas fluorescens FW300-N2E3 0.66 AO353_07105 biotin--protein ligase 0.86 AO353_27795 NADH:ubiquinone oxidoreductase subunit M — —
Pseudomonas sp. DMC3 0.65 GFF3747 Bifunctional ligase/repressor BirA 0.88 GFF1501 NADH-quinone oxidoreductase subunit M low > 89
Pseudomonas sp. RS175 0.65 PFR28_04023 Bifunctional ligase/repressor BirA 0.87 PFR28_02638 NADH-quinone oxidoreductase subunit M — —
Pseudomonas fluorescens SBW25-INTG 0.65 PFLU_RS27265 bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor 0.86 PFLU_RS18670 NADH-quinone oxidoreductase subunit M low > 109
Pseudomonas fluorescens SBW25 0.65 PFLU_RS27265 bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor 0.86 PFLU_RS18670 NADH-quinone oxidoreductase subunit M low > 109
Pseudomonas simiae WCS417 0.64 PS417_25635 biotin--protein ligase 0.86 PS417_16630 NADH:ubiquinone oxidoreductase subunit M — —
Pseudomonas sp. SVBP6 0.64 COO64_RS16330 birA bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA 0.81 COO64_RS24325 nuoM NADH-quinone oxidoreductase subunit M low > 93
Pseudomonas lactucae CFBP13502 0.64 GEMAOFIL_05242 Bifunctional ligase/repressor BirA 0.87 GEMAOFIL_03653 NADH-quinone oxidoreductase subunit M low > 96
Pseudomonas orientalis W4I3 0.62 QF045_RS27660 bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA 0.86 QF045_RS18395 NADH-quinone oxidoreductase subunit M low > 93
Pseudomonas putida KT2440 0.62 PP_0437 bifunctional biotin-[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA 0.81 PP_4130 NADH:ubiquinone oxidoreductase, membrane subunit M — —
Pseudomonas sp. BP01 0.61 JOY50_RS20490 birA bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA 0.81 JOY50_RS07020 nuoM NADH-quinone oxidoreductase subunit M — —
Pseudomonas aeruginosa PUPa3 0.58 DQ20_RS52880 birA;go_function=biotin-[acetyl-CoA-carboxylase bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA 0.80 DQ20_RS35005 nuoM;go_function=NADH NADH-quinone oxidoreductase subunit M — —
Pseudomonas aeruginosa PA14 0.58 IKLFDK_22055 bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA 0.80 IKLFDK_13295 NADH-quinone oxidoreductase subunit M — —
Pseudomonas aeruginosa MRSN321 0.58 DY961_RS29665 birA;go_function=biotin-[acetyl-CoA-carboxylase bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA 0.80 DY961_RS03975 nuoM;go_function=NADH NADH-quinone oxidoreductase subunit M — —
Pseudomonas segetis P6 0.55 ACVTMO_RS04535 birA bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA 0.77 ACVTMO_RS12760 nuoM NADH-quinone oxidoreductase subunit M — —
Pseudomonas sp. S08-1 0.51 OH686_15250 Biotin operon repressor / Biotin--protein ligase 0.78 OH686_00100 NADH-ubiquinone oxidoreductase chain M — —
Enterobacter sp. TBS_079 0.34 MPMX20_04425 Bifunctional ligase/repressor BirA 0.71 MPMX20_03207 NADH-quinone oxidoreductase subunit M — —
Enterobacter asburiae PDN3 0.34 EX28DRAFT_4037 birA, biotin-[acetyl-CoA-carboxylase] ligase region/BirA biotin operon repressor domain 0.71 EX28DRAFT_0333 proton-translocating NADH-quinone oxidoreductase, chain M — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.33 GFF3217 Biotin operon repressor / Biotin-protein ligase (EC 6.3.4.15) 0.71 GFF1880 NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) — —
Escherichia coli ECRC98 0.33 JDDGAC_17115 birA bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA 0.71 JDDGAC_26860 nuoM NADH-quinone oxidoreductase subunit M — —
Escherichia coli ECRC100 0.33 OKFHMN_13490 birA bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA 0.71 OKFHMN_22895 nuoM NADH-quinone oxidoreductase subunit M — —
Escherichia coli ECRC99 0.33 KEDOAH_14670 birA bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA 0.71 KEDOAH_05300 nuoM NADH-quinone oxidoreductase subunit M — —
Escherichia coli ECRC101 0.33 MCAODC_03990 birA bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA 0.71 MCAODC_13935 nuoM NADH-quinone oxidoreductase subunit M — —
Escherichia coli ECRC102 0.33 NIAGMN_11240 birA bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA 0.71 NIAGMN_20665 nuoM NADH-quinone oxidoreductase subunit M — —
Escherichia coli BL21 0.33 ECD_03854 bifunctional biotin-[acetylCoA carboxylase] holoenzyme synthetase/ DNA-binding transcriptional repressor, bio-5'-AMP-binding 0.71 ECD_02202 NADH:ubiquinone oxidoreductase, membrane subunit M — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.33 OHPLBJKB_04077 Bifunctional ligase/repressor BirA 0.71 OHPLBJKB_01429 NADH-quinone oxidoreductase subunit M — —
Escherichia coli ECRC62 0.33 BNILDI_05890 birA bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA 0.71 BNILDI_13435 nuoM NADH-quinone oxidoreductase subunit M — —
Escherichia coli BW25113 0.33 b3973 birA biotin--protein ligase (NCBI) 0.71 b2277 nuoM NADH dehydrogenase subunit M (NCBI) low > 76
Escherichia coli ECOR27 0.33 NOLOHH_05635 birA bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA 0.71 NOLOHH_14515 nuoM NADH-quinone oxidoreductase subunit M — —
Erwinia tracheiphila SCR3 0.33 LU632_RS19510 birA bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA 0.71 LU632_RS08020 nuoM NADH-quinone oxidoreductase subunit M — —
Erwinia tracheiphila HP pepo 2.2 0.33 IJEDHG_12550 birA bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA 0.71 IJEDHG_18100 nuoM NADH-quinone oxidoreductase subunit M — —
Escherichia coli ECOR38 0.33 HEPCGN_12140 birA bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA 0.71 HEPCGN_22100 nuoM NADH-quinone oxidoreductase subunit M — —
Pantoea agglomerans CFBP13505 P0401 0.33 PagCFBP13505_RS22855 bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA 0.71 PagCFBP13505_RS00390 NADH-quinone oxidoreductase subunit M — —
Escherichia coli Nissle 1917 0.32 ECOLIN_RS22935 bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA 0.71 ECOLIN_RS13230 NADH-quinone oxidoreductase subunit M — —
Rahnella sp. WP5 0.32 EX31_RS17135 bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA 0.72 EX31_RS19380 NADH-quinone oxidoreductase subunit M — —
Klebsiella pneumoniae MKP103 0.32 KDGMDA_09915 bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA 0.72 KDGMDA_27015 NADH-quinone oxidoreductase subunit M — —
Escherichia fergusonii Becca 0.32 EFB2_04637 Bifunctional ligase/repressor BirA 0.71 EFB2_01582 NADH-quinone oxidoreductase subunit M — —
Serratia liquefaciens MT49 0.32 IAI46_01185 bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA 0.73 IAI46_17655 NADH-quinone oxidoreductase subunit M — —
Dickeya dianthicola 67-19 0.32 HGI48_RS01025 bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA 0.70 HGI48_RS14255 NADH-quinone oxidoreductase subunit M — —
Dickeya dianthicola ME23 0.32 DZA65_RS01090 bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA 0.70 DZA65_RS14930 NADH-quinone oxidoreductase subunit M — —
Pantoea sp. MT58 0.32 IAI47_18175 bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA 0.71 IAI47_06415 NADH-quinone oxidoreductase subunit M — —
Dickeya dadantii 3937 0.32 DDA3937_RS01030 bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA 0.70 DDA3937_RS14280 NADH-quinone oxidoreductase subunit M — —
Klebsiella michiganensis M5al 0.31 BWI76_RS01425 bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor 0.72 BWI76_RS20135 NADH-quinone oxidoreductase subunit M — —
Kangiella aquimarina DSM 16071 0.31 B158DRAFT_1855 birA, biotin-[acetyl-CoA-carboxylase] ligase region 0.30 B158DRAFT_0115 NADH dehydrogenase subunit M (EC 1.6.5.3) — —
Pectobacterium carotovorum WPP14 0.30 HER17_RS20500 bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA 0.72 HER17_RS07180 NADH-quinone oxidoreductase subunit M — —
Erwinia amylovora T8 0.30 OLJFJH_06610 bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA 0.72 OLJFJH_11465 NADH-quinone oxidoreductase subunit M — —
Shewanella oneidensis MR-1 0.30 SO0214 birA birA bifunctional protein (NCBI ptt file) 0.67 SO1010 nuoM NADH dehydrogenase I, M subunit (NCBI ptt file) — —
Methylophilus sp. DMC18 0.30 GFF326 Bifunctional ligase/repressor BirA 0.32 GFF952 NADH-quinone oxidoreductase subunit M — —
Rhodanobacter sp. FW510-T8 0.24 OKGIIK_00655 Bifunctional ligase/repressor BirA 0.30 OKGIIK_05825 nuoM NADH-quinone oxidoreductase subunit M — —
Dyella japonica UNC79MFTsu3.2 0.24 ABZR86_RS18380 biotin--[acetyl-CoA-carboxylase] ligase 0.31 ABZR86_RS06055 NADH-quinone oxidoreductase subunit M — —
Rhodanobacter denitrificans MT42 0.23 LRK55_RS05720 biotin--[acetyl-CoA-carboxylase] ligase 0.31 LRK55_RS00845 NADH-quinone oxidoreductase subunit M — —
Xanthomonas campestris pv. campestris strain 8004 0.21 Xcc-8004.5002.1 hypothetical protein 0.30 Xcc-8004.1995.1 NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) — —
Rhodanobacter denitrificans FW104-10B01 0.21 LRK54_RS05965 biotin--[acetyl-CoA-carboxylase] ligase 0.30 LRK54_RS01070 NADH-quinone oxidoreductase subunit M — —
Rhodanobacter sp000427505 FW510-R12 0.20 LRK53_RS17370 biotin--[acetyl-CoA-carboxylase] ligase 0.33 LRK53_RS08995 NADH-quinone oxidoreductase subunit M — —
Lysobacter sp. OAE881 0.19 ABIE51_RS03960 bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA 0.29 ABIE51_RS08370 NADH-quinone oxidoreductase subunit M — —

Not shown: 9 genomes with orthologs for Psyr_4564 only; 47 genomes with orthologs for Psyr_3208 only