Conservation of cofitness between Psyr_0366 and Psyr_3045 in Pseudomonas syringae pv. syringae B728a

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_0366 transcriptional regulator, GntR family 1.0 Psyr_3045 PqiB family protein 0.33 7
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_0366 transcriptional regulator, GntR family 1.00 Psyr_3045 PqiB family protein low > 86
Pseudomonas fluorescens GW456-L13 0.82 PfGW456L13_329 Histidine utilization repressor 0.57 PfGW456L13_3226 Paraquat-inducible protein B low > 87
Pseudomonas fluorescens FW300-N2E2 0.82 Pf6N2E2_3807 Histidine utilization repressor 0.57 Pf6N2E2_2141 Paraquat-inducible protein B low > 103
Pseudomonas fluorescens FW300-N2C3 0.82 AO356_09640 histidine utilization repressor 0.56 AO356_01345 mammalian cell entry protein low > 104
Pseudomonas fluorescens FW300-N2E3 0.81 AO353_12240 histidine utilization repressor 0.55 AO353_29375 mammalian cell entry protein low > 101
Pseudomonas sp. RS175 0.81 PFR28_04963 HTH-type transcriptional repressor NagR 0.57 PFR28_01295 Intermembrane transport protein PqiB low > 88
Pseudomonas fluorescens FW300-N1B4 0.80 Pf1N1B4_1590 Histidine utilization repressor 0.56 Pf1N1B4_4821 Paraquat-inducible protein B — —
Pseudomonas fluorescens SBW25 0.80 PFLU_RS01765 histidine utilization repressor 0.57 PFLU_RS04610 MCE family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.80 PFLU_RS01765 histidine utilization repressor 0.57 PFLU_RS04610 MCE family protein low > 109
Pseudomonas putida KT2440 0.79 PP_5035 Histidine utilization repressor 0.52 PP_2577 putative paraquat-inducible protein B (pqiB like) low > 96
Dickeya dadantii 3937 0.59 DDA3937_RS15020 histidine utilization repressor 0.44 DDA3937_RS10765 MCE family protein low > 74
Dickeya dianthicola ME23 0.58 DZA65_RS15850 histidine utilization repressor 0.23 DZA65_RS13360 intermembrane transport protein PqiB low > 75
Dickeya dianthicola 67-19 0.58 HGI48_RS15100 histidine utilization repressor 0.23 HGI48_RS12895 intermembrane transport protein PqiB low > 71
Serratia liquefaciens MT49 0.58 IAI46_10615 histidine utilization repressor 0.23 IAI46_08835 intermembrane transport protein PqiB low > 86
Klebsiella michiganensis M5al 0.58 BWI76_RS08730 histidine utilization repressor 0.23 BWI76_RS09940 paraquat-inducible protein B low > 92
Enterobacter sp. TBS_079 0.58 MPMX20_01398 HTH-type transcriptional repressor NagR 0.22 MPMX20_01602 Intermembrane transport protein PqiB low > 85
Enterobacter asburiae PDN3 0.57 EX28DRAFT_2221 histidine utilization repressor, proteobacterial 0.23 EX28DRAFT_1992 Paraquat-inducible protein B low > 76
Pantoea sp. MT58 0.56 IAI47_13270 histidine utilization repressor 0.23 IAI47_12675 intermembrane transport protein PqiB low > 76
Rahnella sp. WP5 0.56 EX31_RS06725 histidine utilization repressor 0.47 EX31_RS00480 MCE family protein low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.55 GFF665 Histidine utilization repressor 0.23 GFF3242 Paraquat-inducible protein B low > 78
Variovorax sp. OAS795 0.45 ABID97_RS03415 histidine utilization repressor 0.45 ABID97_RS15885 MlaD family protein low > 91
Cupriavidus basilensis FW507-4G11 0.44 RR42_RS16925 histidine utilization repressor 0.42 RR42_RS03885 mammalian cell entry protein low > 128
Variovorax sp. SCN45 0.44 GFF6410 Histidine utilization repressor 0.44 GFF1389 Paraquat-inducible protein B low > 127
Azospirillum sp. SherDot2 0.41 MPMX19_04937 Mannosyl-D-glycerate transport/metabolism system repressor MngR 0.26 MPMX19_05102 Intermembrane transport protein PqiB low > 112
Shewanella sp. ANA-3 0.41 Shewana3_0099 histidine utilization repressor (RefSeq) 0.22 Shewana3_1920 hypothetical protein (RefSeq) low > 73
Paraburkholderia sabiae LMG 24235 0.40 QEN71_RS23510 histidine utilization repressor 0.44 QEN71_RS26690 MlaD family protein low > 153
Paraburkholderia bryophila 376MFSha3.1 0.39 H281DRAFT_05296 GntR family transcriptional regulator, histidine utilization repressor 0.45 H281DRAFT_04660 paraquat-inducible protein B low > 103
Ralstonia sp. UNC404CL21Col 0.39 ABZR87_RS01035 histidine utilization repressor 0.39 ABZR87_RS08260 intermembrane transport protein PqiB low > 80
Paraburkholderia graminis OAS925 0.39 ABIE53_001730 GntR family histidine utilization transcriptional repressor 0.45 ABIE53_000820 paraquat-inducible protein B low > 113
Burkholderia phytofirmans PsJN 0.39 BPHYT_RS07560 histidine utilization repressor 0.45 BPHYT_RS03460 mammalian cell entry protein — —
Ralstonia solanacearum IBSBF1503 0.39 RALBFv3_RS05400 histidine utilization repressor 0.40 RALBFv3_RS12320 MCE family protein low > 76
Ralstonia solanacearum UW163 0.39 UW163_RS08225 histidine utilization repressor 0.40 UW163_RS01285 MCE family protein — —
Ralstonia solanacearum PSI07 0.39 RPSI07_RS11905 histidine utilization repressor 0.40 RPSI07_RS20990 MCE family protein low > 81
Vibrio cholerae E7946 ATCC 55056 0.39 CSW01_06100 histidine utilization repressor 0.23 CSW01_08800 paraquat-inducible protein B low > 62
Ralstonia solanacearum GMI1000 0.38 RS_RS13260 histidine utilization repressor 0.39 RS_RS03005 MCE family protein low > 80
Castellaniella sp019104865 MT123 0.33 ABCV34_RS12825 histidine utilization repressor 0.38 ABCV34_RS05295 MlaD family protein low > 48
Escherichia coli BW25113 0.15 b3375 yhfR putative transcriptional regulator (VIMSS) 0.22 b0951 pqiB paraquat-inducible protein B (NCBI) low > 76
Escherichia coli BL21 0.15 ECD_03225 putative DNA-binding transcriptional regulator 0.22 ECD_00955 paraquat-inducible, SoxRS-regulated MCE domain protein low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.15 OHPLBJKB_00328 putative fructoselysine utilization operon transcriptional repressor 0.22 OHPLBJKB_02715 Paraquat-inducible protein B low > 73
Pectobacterium carotovorum WPP14 0.12 HER17_RS13540 GntR family transcriptional regulator 0.45 HER17_RS13900 MlaD family protein low > 75

Not shown: 18 genomes with orthologs for Psyr_0366 only; 21 genomes with orthologs for Psyr_3045 only