Conservation of cofitness between Psyr_2680 and Psyr_1936 in Pseudomonas syringae pv. syringae B728a

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_2680 Binding-protein-dependent transport systems inner membrane component 1.0 Psyr_1936 tRNA-U16,U17-dihydrouridine synthase 0.36 11
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_2680 Binding-protein-dependent transport systems inner membrane component 1.00 Psyr_1936 tRNA-U16,U17-dihydrouridine synthase low > 86
Enterobacter sp. TBS_079 0.73 MPMX20_00907 Glutathione transport system permease protein GsiD 0.54 MPMX20_00265 tRNA-dihydrouridine(20/20a) synthase low > 85
Enterobacter asburiae PDN3 0.73 EX28DRAFT_2671 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 0.54 EX28DRAFT_4263 tRNA dihydrouridine synthase A low > 76
Rahnella sp. WP5 0.72 EX31_RS09190 ABC transporter permease 0.56 EX31_RS11865 tRNA dihydrouridine(20/20a) synthase DusA low > 89
Paraburkholderia graminis OAS925 0.68 ABIE53_006346 peptide/nickel transport system permease protein 0.51 ABIE53_001975 tRNA-dihydrouridine synthase A low > 113
Paraburkholderia sabiae LMG 24235 0.68 QEN71_RS31495 ABC transporter permease 0.54 QEN71_RS22650 tRNA dihydrouridine(20/20a) synthase DusA low > 153
Paraburkholderia bryophila 376MFSha3.1 0.66 H281DRAFT_01028 peptide/nickel transport system permease protein 0.50 H281DRAFT_00766 tRNA-U16,U17-dihydrouridine synthase low > 103
Bosea sp. OAE506 0.65 ABIE41_RS21970 ABC transporter permease 0.46 ABIE41_RS21285 tRNA dihydrouridine(20/20a) synthase DusA low > 77
Agrobacterium fabrum C58 0.64 Atu4721 dipeptide ABC transporter permease 0.48 Atu1515 hypothetical protein low > 89
Rhizobium sp. OAE497 0.60 ABIE40_RS20695 ABC transporter permease 0.50 ABIE40_RS10895 tRNA dihydrouridine(20/20a) synthase DusA low > 107
Pantoea sp. MT58 0.46 IAI47_11330 ABC transporter permease subunit 0.55 IAI47_17865 tRNA dihydrouridine(20/20a) synthase DusA low > 76
Dickeya dadantii 3937 0.45 DDA3937_RS20580 ABC transporter permease subunit 0.55 DDA3937_RS17480 tRNA dihydrouridine(20/20a) synthase DusA low > 74
Castellaniella sp019104865 MT123 0.45 ABCV34_RS13525 glutathione ABC transporter permease GsiD 0.45 ABCV34_RS04335 tRNA dihydrouridine(20/20a) synthase DusA low > 48
Erwinia tracheiphila SCR3 0.45 LU632_RS09570 gsiD glutathione ABC transporter permease GsiD 0.50 LU632_RS23765 dusA tRNA dihydrouridine(20/20a) synthase DusA low > 74
Ralstonia solanacearum GMI1000 0.44 RS_RS06930 glutathione ABC transporter permease GsiD 0.54 RS_RS06510 tRNA dihydrouridine(20/20a) synthase DusA low > 80
Pectobacterium carotovorum WPP14 0.44 HER17_RS20880 ABC transporter permease subunit 0.55 HER17_RS03680 tRNA dihydrouridine(20/20a) synthase DusA low > 75
Ralstonia solanacearum IBSBF1503 0.43 RALBFv3_RS00255 glutathione ABC transporter permease GsiD 0.54 RALBFv3_RS15730 tRNA dihydrouridine(20/20a) synthase DusA low > 76
Ralstonia solanacearum UW163 0.43 UW163_RS13585 glutathione ABC transporter permease GsiD 0.54 UW163_RS13175 tRNA dihydrouridine(20/20a) synthase DusA — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.43 OHPLBJKB_02880 Glutathione transport system permease protein GsiD 0.54 OHPLBJKB_03994 tRNA-dihydrouridine(20/20a) synthase low > 73
Azospirillum sp. SherDot2 0.43 MPMX19_04007 Glutathione transport system permease protein GsiD 0.53 MPMX19_00670 tRNA-dihydrouridine(20/20a) synthase low > 112
Ralstonia sp. UNC404CL21Col 0.43 ABZR87_RS11720 glutathione ABC transporter permease GsiD 0.53 ABZR87_RS11300 tRNA dihydrouridine(20/20a) synthase DusA low > 80
Escherichia coli ECOR38 0.43 HEPCGN_01945 gsiD glutathione ABC transporter permease GsiD 0.54 HEPCGN_11560 dusA tRNA dihydrouridine(20/20a) synthase DusA low > 87
Escherichia coli ECRC101 0.43 MCAODC_25300 gsiD glutathione ABC transporter permease GsiD 0.54 MCAODC_03455 dusA tRNA dihydrouridine(20/20a) synthase DusA low > 87
Escherichia coli ECRC100 0.43 OKFHMN_06085 gsiD glutathione ABC transporter permease GsiD 0.54 OKFHMN_12945 dusA tRNA dihydrouridine(20/20a) synthase DusA low > 80
Escherichia coli ECOR27 0.43 NOLOHH_22445 gsiD glutathione ABC transporter permease GsiD 0.54 NOLOHH_05195 dusA tRNA dihydrouridine(20/20a) synthase DusA low > 75
Escherichia coli ECRC99 0.43 KEDOAH_21825 gsiD glutathione ABC transporter permease GsiD 0.54 KEDOAH_15205 dusA tRNA dihydrouridine(20/20a) synthase DusA — —
Escherichia fergusonii Becca 0.43 EFB2_03274 Glutathione transport system permease protein GsiD 0.54 EFB2_04556 tRNA-dihydrouridine(20/20a) synthase low > 86
Escherichia coli ECRC102 0.43 NIAGMN_04130 gsiD glutathione ABC transporter permease GsiD 0.54 NIAGMN_10790 dusA tRNA dihydrouridine(20/20a) synthase DusA — —
Escherichia coli Nissle 1917 0.43 ECOLIN_RS04425 glutathione ABC transporter permease GsiD 0.54 ECOLIN_RS23355 tRNA dihydrouridine(20/20a) synthase DusA — —
Escherichia coli ECRC62 0.43 BNILDI_20720 gsiD glutathione ABC transporter permease GsiD 0.54 BNILDI_06330 dusA tRNA dihydrouridine(20/20a) synthase DusA low > 75
Escherichia coli ECRC98 0.43 JDDGAC_09720 gsiD glutathione ABC transporter permease GsiD 0.54 JDDGAC_16580 dusA tRNA dihydrouridine(20/20a) synthase DusA 0.52 80
Burkholderia phytofirmans PsJN 0.43 BPHYT_RS15525 glutathione ABC transporter permease GsiD 0.52 BPHYT_RS08700 tRNA-dihydrouridine synthase A low > 109
Escherichia coli BW25113 0.43 b0832 yliD predicted peptide transporter subunit: membrane component of ABC superfamily (NCBI) 0.54 b4049 dusA tRNA-dihydrouridine synthase A (RefSeq) low > 76
Dickeya dianthicola ME23 0.43 DZA65_RS00690 ABC transporter permease subunit 0.55 DZA65_RS18620 tRNA dihydrouridine(20/20a) synthase DusA low > 75
Dickeya dianthicola 67-19 0.43 HGI48_RS00635 ABC transporter permease subunit 0.54 HGI48_RS17540 tRNA dihydrouridine(20/20a) synthase DusA low > 71
Escherichia coli BL21 0.43 ECD_00799 glutathione ABC transporter permease 0.54 ECD_03921 tRNA-dihydrouridine synthase A — —
Sinorhizobium meliloti 1021 0.42 SMa0106 ABC transporter permease 0.43 SMc04235 tRNA-dihydrouridine synthase A low > 103
Variovorax sp. SCN45 0.42 GFF1212 Oligopeptide transport permease protein OppC-like @ Glutathione ABC transporter, permease protein GsiD 0.50 GFF928 tRNA-dihydrouridine(20/20a) synthase (EC 1.3.1.91) low > 127
Ralstonia solanacearum PSI07 0.42 RPSI07_RS17225 glutathione ABC transporter permease GsiD 0.54 RPSI07_RS17630 tRNA dihydrouridine(20/20a) synthase DusA low > 81
Klebsiella michiganensis M5al 0.42 BWI76_RS09110 glutathione ABC transporter permease GsiD 0.55 BWI76_RS01900 tRNA-dihydrouridine synthase A low > 92
Herbaspirillum seropedicae SmR1 0.42 HSERO_RS09205 glutathione ABC transporter permease 0.55 HSERO_RS17905 tRNA-dihydrouridine synthase A low > 78
Variovorax sp. OAS795 0.41 ABID97_RS15395 glutathione ABC transporter permease GsiD 0.52 ABID97_RS13915 tRNA dihydrouridine(20/20a) synthase DusA low > 91
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.41 GFF730 Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) 0.55 GFF1418 tRNA dihydrouridine synthase A (EC 1.-.-.-) low > 78
Serratia liquefaciens MT49 0.41 IAI46_12035 D,D-dipeptide ABC transporter permease 0.55 IAI46_22970 tRNA dihydrouridine(20/20a) synthase DusA low > 86
Cupriavidus basilensis FW507-4G11 0.41 RR42_RS11980 glutathione ABC transporter permease 0.54 RR42_RS12665 tRNA-dihydrouridine synthase A low > 128
Rhodopseudomonas palustris CGA009 0.38 TX73_007440 ABC transporter permease 0.46 TX73_010150 tRNA dihydrouridine(20/20a) synthase DusA low > 86
Vibrio cholerae E7946 ATCC 55056 0.37 CSW01_05555 oligopeptide ABC transporter permease OppC 0.54 CSW01_01985 tRNA dihydrouridine(20/20a) synthase DusA low > 62
Acidovorax sp. GW101-3H11 0.37 Ac3H11_696 Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) 0.49 Ac3H11_2288 tRNA dihydrouridine synthase A low > 79
Dinoroseobacter shibae DFL-12 0.35 Dshi_3794 binding-protein-dependent transport systems inner membrane component (RefSeq) 0.47 Dshi_2512 TIM-barrel protein, yjbN family (RefSeq) low > 64

Not shown: 4 genomes with orthologs for Psyr_2680 only; 34 genomes with orthologs for Psyr_1936 only