Conservation of cofitness between Psyr_3514 and Psyr_1650 in Pseudomonas syringae pv. syringae B728a

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_3514 delta-1-piperideine-6-carboxylate dehydrogenase 1.0 Psyr_1650 aminodeoxychorismate lyase apoprotein 0.31 20
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_3514 delta-1-piperideine-6-carboxylate dehydrogenase 1.00 Psyr_1650 aminodeoxychorismate lyase apoprotein low > 86
Pseudomonas putida KT2440 0.91 PP_5258 L-piperidine-6-carboxylate dehydrogenase 0.70 PP_1917 4-amino-4-deoxychorismate lyase low > 96
Pseudomonas fluorescens GW456-L13 0.82 PfGW456L13_127 L-pipecolate dehydrogenase (EC 1.5.99.3) 0.73 PfGW456L13_2108 Aminodeoxychorismate lyase (EC 4.1.3.38) low > 87
Pseudomonas sp. RS175 0.82 PFR28_05151 Succinate-semialdehyde dehydrogenase [NADP(+)] 0.68 PFR28_03007 Aminodeoxychorismate lyase low > 88
Pseudomonas fluorescens FW300-N2E3 0.81 AO353_13330 aldehyde dehydrogenase 0.74 AO353_01350 4-amino-4-deoxychorismate lyase 0.28 12
Pseudomonas fluorescens FW300-N2E2 0.81 Pf6N2E2_3582 L-pipecolate dehydrogenase (EC 1.5.99.3) 0.64 Pf6N2E2_5955 Aminodeoxychorismate lyase (EC 4.1.3.38) low > 103
Pseudomonas fluorescens FW300-N1B4 0.81 Pf1N1B4_1384 L-pipecolate dehydrogenase (EC 1.5.99.3) 0.72 Pf1N1B4_448 Aminodeoxychorismate lyase (EC 4.1.3.38) low > 87
Pseudomonas fluorescens FW300-N2C3 0.81 AO356_08510 aldehyde dehydrogenase 0.68 AO356_20180 4-amino-4-deoxychorismate lyase low > 104
Pseudomonas fluorescens SBW25 0.80 PFLU_RS02715 aldehyde dehydrogenase family protein 0.72 PFLU_RS23040 aminodeoxychorismate lyase low > 109
Pseudomonas fluorescens SBW25-INTG 0.80 PFLU_RS02715 aldehyde dehydrogenase family protein 0.72 PFLU_RS23040 aminodeoxychorismate lyase 0.15 94
Pseudomonas simiae WCS417 0.80 PS417_02645 aldehyde dehydrogenase 0.71 PS417_21425 4-amino-4-deoxychorismate lyase low > 88
Castellaniella sp019104865 MT123 0.73 ABCV34_RS09135 aldehyde dehydrogenase family protein 0.14 ABCV34_RS14450 D-amino acid aminotransferase low > 48
Azospirillum sp. SherDot2 0.71 MPMX19_05045 Succinate-semialdehyde dehydrogenase [NADP(+)] 0.21 MPMX19_04995 D-alanine aminotransferase low > 112
Azospirillum brasilense Sp245 0.69 AZOBR_RS32620 aldehyde dehydrogenase 0.17 AZOBR_RS23800 2-keto-4-methylthiobutyrate aminotransferase low > 97
Sinorhizobium meliloti 1021 0.68 SMc04385 L-2-aminoadipate semialdehyde dehydrogenase (EC 1.2.1.31) (from data) 0.14 SMc01047 D-amino acid aminotransferase low > 103
Ralstonia solanacearum PSI07 0.68 RPSI07_RS07435 aldehyde dehydrogenase family protein 0.13 RPSI07_RS02705 D-amino-acid transaminase low > 81
Rhodospirillum rubrum S1H 0.67 Rru_A0285 Aldehyde dehydrogenase (NCBI) 0.16 Rru_A1131 Aminotransferase, class IV (NCBI) low > 58
Ralstonia sp. UNC404CL21Col 0.67 ABZR87_RS22495 aldehyde dehydrogenase family protein 0.13 ABZR87_RS20740 D-amino-acid transaminase low > 80
Ralstonia solanacearum GMI1000 0.66 RS_RS24750 aldehyde dehydrogenase family protein 0.14 RS_RS20550 D-amino-acid transaminase low > 80
Caulobacter crescentus NA1000 0.66 CCNA_01274 piperideine-6-carboxylate dehydrogenase 0.17 CCNA_03047 4-amino-4-deoxychorismate lyase low > 66
Caulobacter crescentus NA1000 Δfur 0.66 CCNA_01274 piperideine-6-carboxylate dehydrogenase 0.17 CCNA_03047 4-amino-4-deoxychorismate lyase low > 67
Rhizobium sp. OAE497 0.66 ABIE40_RS18490 aldehyde dehydrogenase family protein 0.14 ABIE40_RS09105 D-amino-acid transaminase 0.38 106
Ralstonia solanacearum UW163 0.66 UW163_RS17000 aldehyde dehydrogenase family protein 0.14 UW163_RS19020 D-amino-acid transaminase — —
Agrobacterium fabrum C58 0.66 Atu4153 aldehyde dehydrogenase 0.10 Atu2511 D-alanine aminotransferase low > 89
Ralstonia solanacearum IBSBF1503 0.66 RALBFv3_RS16265 aldehyde dehydrogenase family protein 0.14 RALBFv3_RS20155 D-amino-acid transaminase low > 76
Variovorax sp. SCN45 0.64 GFF5027 Aldehyde dehydrogenase B (EC 1.2.1.22) 0.12 GFF3678 D-alanine aminotransferase (EC 2.6.1.21) low > 127
Variovorax sp. OAS795 0.62 ABID97_RS04070 aldehyde dehydrogenase family protein 0.12 ABID97_RS00490 D-amino acid aminotransferase low > 91
Pedobacter sp. GW460-11-11-14-LB5 0.60 CA265_RS19780 aldehyde dehydrogenase family protein 0.11 CA265_RS14410 4-amino-4-deoxychorismate lyase low > 88
Cupriavidus basilensis FW507-4G11 0.58 RR42_RS18500 aldehyde dehydrogenase 0.14 RR42_RS22950 cytochrome C550 low > 128
Mucilaginibacter yixingensis YX-36 DSM 26809 0.58 ABZR88_RS18780 aldehyde dehydrogenase family protein 0.12 ABZR88_RS03990 aminotransferase class IV low > 71
Echinicola vietnamensis KMM 6221, DSM 17526 0.57 Echvi_0535 NAD-dependent aldehyde dehydrogenases 0.11 Echvi_2832 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase low > 79
Lysobacter sp. OAE881 0.55 ABIE51_RS13720 aldehyde dehydrogenase family protein 0.31 ABIE51_RS13925 aminodeoxychorismate lyase low > 62
Dyella japonica UNC79MFTsu3.2 0.53 ABZR86_RS07440 aldehyde dehydrogenase family protein 0.37 ABZR86_RS06150 aminodeoxychorismate lyase — —
Rhodanobacter sp. FW510-T8 0.52 OKGIIK_09020 adhE aldehyde dehydrogenase family protein 0.35 OKGIIK_05735 pabC aminodeoxychorismate lyase low > 52
Rhodanobacter denitrificans MT42 0.52 LRK55_RS15720 aldehyde dehydrogenase family protein 0.35 LRK55_RS00940 aminodeoxychorismate lyase low > 63
Rhodanobacter denitrificans FW104-10B01 0.52 LRK54_RS15965 aldehyde dehydrogenase family protein 0.36 LRK54_RS01165 aminodeoxychorismate lyase — —
Kangiella aquimarina DSM 16071 0.50 B158DRAFT_1805 NAD-dependent aldehyde dehydrogenases 0.21 B158DRAFT_1750 aminodeoxychorismate lyase low > 40

Not shown: 7 genomes with orthologs for Psyr_3514 only; 45 genomes with orthologs for Psyr_1650 only