Conservation of cofitness between Psyr_1760 and Psyr_1567 in Pseudomonas syringae pv. syringae B728a

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_1760 Peptidoglycan-binding LysM:SLT:MLTD_N 1.0 Psyr_1567 Uncharacterized conserved protein UCP006173 0.36 4
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_1760 Peptidoglycan-binding LysM:SLT:MLTD_N 1.00 Psyr_1567 Uncharacterized conserved protein UCP006173 low > 86
Pseudomonas sp. RS175 0.65 PFR28_01551 Membrane-bound lytic murein transglycosylase D 0.92 PFR28_00716 hypothetical protein 0.35 66
Pseudomonas fluorescens FW300-N2C3 0.65 AO356_24475 lytic transglycosylase 0.92 AO356_04400 hypothetical protein low > 104
Pseudomonas sp. DMC3 0.65 GFF1021 Membrane-bound lytic murein transglycosylase D 0.89 GFF2314 hypothetical protein low > 89
Pseudomonas fluorescens FW300-N2E3 0.64 AO353_23485 lytic transglycosylase 0.93 AO353_17875 hypothetical protein low > 101
Pseudomonas fluorescens FW300-N1B4 0.64 Pf1N1B4_4595 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) 0.92 Pf1N1B4_3349 YcgN (Fragment) — —
Pseudomonas lactucae CFBP13502 0.63 GEMAOFIL_02688 Membrane-bound lytic murein transglycosylase D 0.91 GEMAOFIL_01613 hypothetical protein low > 96
Pseudomonas fluorescens GW456-L13 0.63 PfGW456L13_3341 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) 0.92 PfGW456L13_4492 YcgN (Fragment) low > 87
Pseudomonas fluorescens FW300-N2E2 0.63 Pf6N2E2_586 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) 0.91 Pf6N2E2_2723 YcgN (Fragment) low > 103
Pseudomonas fluorescens SBW25-INTG 0.63 PFLU_RS12905 transglycosylase SLT domain-containing protein 0.91 PFLU_RS07485 YcgN family cysteine cluster protein low > 109
Pseudomonas fluorescens SBW25 0.63 PFLU_RS12905 transglycosylase SLT domain-containing protein 0.91 PFLU_RS07485 YcgN family cysteine cluster protein low > 109
Pseudomonas simiae WCS417 0.63 PS417_12215 lytic transglycosylase 0.91 PS417_07400 hypothetical protein low > 88
Pseudomonas orientalis W4I3 0.62 QF045_RS14750 transglycosylase SLT domain-containing protein 0.91 QF045_RS10050 YcgN family cysteine cluster protein low > 93
Pseudomonas sp. SVBP6 0.61 COO64_RS19245 transglycosylase SLT domain-containing protein 0.84 COO64_RS22310 YcgN family cysteine cluster protein low > 93
Pseudomonas sp. BP01 0.59 JOY50_RS07095 lytic transglycosylase domain-containing protein 0.80 JOY50_RS01535 YcgN family cysteine cluster protein low > 84
Pseudomonas aeruginosa PA14 0.59 IKLFDK_08810 lytic transglycosylase 0.84 IKLFDK_06165 YcgN family cysteine cluster protein low > 98
Pseudomonas aeruginosa PUPa3 0.59 DQ20_RS54870 lytic transglycosylase domain-containing protein 0.84 DQ20_RS52970 YcgN family cysteine cluster protein low > 101
Pseudomonas aeruginosa MRSN321 0.59 DY961_RS20790 lytic transglycosylase domain-containing protein 0.84 DY961_RS18830 YcgN family cysteine cluster protein low > 100
Pseudomonas segetis P6 0.57 ACVTMO_RS13930 lytic transglycosylase domain-containing protein 0.86 ACVTMO_RS09140 YcgN family cysteine cluster protein low > 75
Pseudomonas sp. S08-1 0.55 OH686_03585 Membrane-bound lytic murein transglycosylase D 0.87 OH686_05300 UPF0260 protein YcgN low > 80
Pseudomonas stutzeri RCH2 0.53 Psest_2070 FOG: LysM repeat 0.84 Psest_2992 Uncharacterized conserved protein low > 67
Pseudomonas putida KT2440 0.53 PP_4145 Membrane-bound lytic murein transglycosylase D 0.83 PP_4587 conserved protein of unknown function low > 96
Marinobacter adhaerens HP15 0.34 HP15_1806 membrane-bound lytic murein transglycosylase D precursor 0.48 HP15_1880 uncharacterized conserved protein UCP006173 low > 73
Shewanella loihica PV-4 0.32 Shew_2115 lytic transglycosylase, catalytic (RefSeq) 0.45 Shew_2181 hypothetical protein (RefSeq) low > 60
Shewanella sp. ANA-3 0.31 Shewana3_2370 MltD domain-containing protein (RefSeq) 0.44 Shewana3_2379 hypothetical protein (RefSeq) — —
Alteromonas macleodii MIT1002 0.31 MIT1002_02495 Membrane-bound lytic murein transglycosylase D precursor 0.37 MIT1002_02583 hypothetical protein low > 70
Shewanella oneidensis MR-1 0.31 SO2564 transglycosylase, Slt family (NCBI ptt file) 0.42 SO2573 conserved hypothetical protein (NCBI ptt file) 0.29 42
Kangiella aquimarina DSM 16071 0.30 B158DRAFT_1060 FOG: LysM repeat 0.47 B158DRAFT_1576 Uncharacterized conserved protein low > 40
Vibrio cholerae E7946 ATCC 55056 0.30 CSW01_11400 lytic transglycosylase 0.48 CSW01_05385 YcgN family cysteine cluster protein low > 62
Escherichia coli Nissle 1917 0.28 ECOLIN_RS01155 murein transglycosylase D 0.50 ECOLIN_RS07145 YcgN family cysteine cluster protein — —
Escherichia coli BL21 0.28 ECD_00204 putative membrane-bound lytic murein transglycosylase D 0.50 ECD_01156 UPF0153 family cysteine cluster protein — —
Escherichia coli BW25113 0.28 b0211 mltD predicted membrane-bound lytic murein transglycosylase D (NCBI) 0.50 b1181 ycgN conserved protein (RefSeq) low > 76
Shewanella amazonensis SB2B 0.28 Sama_1885 Slt family transglycosylase (RefSeq) 0.42 Sama_1927 hypothetical protein (RefSeq) low > 62
Enterobacter asburiae PDN3 0.27 EX28DRAFT_2683 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 0.50 EX28DRAFT_0761 Uncharacterized conserved protein low > 76
Klebsiella michiganensis M5al 0.27 BWI76_RS05435 murein transglycosylase D 0.50 BWI76_RS17765 hypothetical protein low > 92
Enterobacter sp. TBS_079 0.27 MPMX20_00896 Membrane-bound lytic murein transglycosylase D 0.51 MPMX20_02704 hypothetical protein low > 85
Pantoea agglomerans CFBP13505 P0401 0.27 PagCFBP13505_RS09810 murein transglycosylase D 0.49 PagCFBP13505_RS02705 YcgN family cysteine cluster protein low > 74
Erwinia amylovora T8 0.26 OLJFJH_18645 murein transglycosylase D 0.49 OLJFJH_13140 YcgN family cysteine cluster protein low > 58
Pantoea sp. MT58 0.26 IAI47_15345 murein transglycosylase D 0.49 IAI47_08870 YcgN family cysteine cluster protein low > 76
Serratia liquefaciens MT49 0.26 IAI46_04130 murein transglycosylase D 0.48 IAI46_14490 YcgN family cysteine cluster protein low > 87
Pectobacterium carotovorum WPP14 0.25 HER17_RS05450 murein transglycosylase D 0.50 HER17_RS11240 YcgN family cysteine cluster protein low > 75
Erwinia tracheiphila HP pepo 2.2 0.25 IJEDHG_15375 mltD murein transglycosylase D 0.49 IJEDHG_22495 ycgN YcgN family cysteine cluster protein low > 61

Not shown: 12 genomes with orthologs for Psyr_1760 only; 32 genomes with orthologs for Psyr_1567 only