Conservation of cofitness between Psyr_4088 and Psyr_0859 in Pseudomonas syringae pv. syringae B728a

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_4088 ketopantoate reductase 1.0 Psyr_0859 Carbonate dehydratase 0.38 4
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_4088 ketopantoate reductase 1.00 Psyr_0859 Carbonate dehydratase low > 86
Pseudomonas fluorescens FW300-N2E3 0.70 AO353_03645 2-dehydropantoate 2-reductase 0.95 AO353_14595 carbonate dehydratase low > 101
Pseudomonas fluorescens GW456-L13 0.69 PfGW456L13_1839 2-dehydropantoate 2-reductase (EC 1.1.1.169) 0.94 PfGW456L13_1553 Carbonic anhydrase (EC 4.2.1.1) low > 87
Pseudomonas fluorescens FW300-N1B4 0.69 Pf1N1B4_651 2-dehydropantoate 2-reductase (EC 1.1.1.169) 0.94 Pf1N1B4_2893 Carbonic anhydrase (EC 4.2.1.1) low > 87
Pseudomonas fluorescens FW300-N2E2 0.68 Pf6N2E2_5521 2-dehydropantoate 2-reductase (EC 1.1.1.169) 0.95 Pf6N2E2_5190 Carbonic anhydrase (EC 4.2.1.1) low > 103
Pseudomonas sp. RS175 0.68 PFR28_03426 2-dehydropantoate 2-reductase 0.96 PFR28_03679 Carbonic anhydrase 2 low > 88
Pseudomonas simiae WCS417 0.68 PS417_22515 2-dehydropantoate 2-reductase 0.97 PS417_03310 carbonate dehydratase low > 88
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_17955 2-dehydropantoate 2-reductase 0.95 AO356_16270 carbonate dehydratase low > 104
Pseudomonas fluorescens SBW25 0.67 PFLU_RS24155 putative 2-dehydropantoate 2-reductase 0.96 PFLU_RS03405 carbonate dehydratase low > 109
Pseudomonas fluorescens SBW25-INTG 0.67 PFLU_RS24155 putative 2-dehydropantoate 2-reductase 0.96 PFLU_RS03405 carbonate dehydratase low > 109
Pseudomonas sp. S08-1 0.60 OH686_08220 2-dehydropantoate 2-reductase 0.88 OH686_08030 Carbonic anhydrase, beta class low > 80
Pseudomonas stutzeri RCH2 0.57 Psest_1140 2-dehydropantoate 2-reductase 0.85 Psest_1062 Carbonic anhydrase low > 67
Vibrio cholerae E7946 ATCC 55056 0.24 CSW01_11730 2-dehydropantoate 2-reductase 0.57 CSW01_03110 carbonate dehydratase low > 62
Shewanella sp. ANA-3 0.23 Shewana3_0780 2-dehydropantoate 2-reductase (RefSeq) 0.60 Shewana3_1909 carbonic anhydrase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.23 SO3817 panE 2-dehydropantoate 2-reductase (NCBI ptt file) 0.59 SO2474 carbonic anhydrase family protein (NCBI ptt file) low > 76
Enterobacter sp. TBS_079 0.22 MPMX20_01016 2-dehydropantoate 2-reductase 0.61 MPMX20_00820 Carbonic anhydrase 2 low > 85
Serratia liquefaciens MT49 0.22 IAI46_04950 2-dehydropantoate 2-reductase 0.59 IAI46_21270 carbonate dehydratase low > 86
Enterobacter asburiae PDN3 0.21 EX28DRAFT_2546 2-dehydropantoate 2-reductase 0.60 EX28DRAFT_3723 Carbonic anhydrase low > 76
Klebsiella michiganensis M5al 0.21 BWI76_RS06405 2-dehydropantoate 2-reductase 0.61 BWI76_RS04960 carbonate dehydratase low > 92
Marinobacter adhaerens HP15 0.21 HP15_1312 2-dehydropantoate 2-reductase 0.54 HP15_2268 carbonate dehydratase low > 73
Shewanella loihica PV-4 0.21 Shew_2895 2-dehydropantoate 2-reductase (RefSeq) 0.59 Shew_1859 carbonate dehydratase (RefSeq) low > 60
Dickeya dianthicola ME23 0.21 DZA65_RS05940 2-dehydropantoate 2-reductase 0.60 DZA65_RS17180 carbonate dehydratase — —
Escherichia coli Nissle 1917 0.20 ECOLIN_RS02560 2-dehydropantoate 2-reductase 0.59 ECOLIN_RS00700 carbonate dehydratase — —
Escherichia coli ECRC100 0.20 OKFHMN_08395 panE 2-dehydropantoate 2-reductase 0.59 OKFHMN_10440 can carbonate dehydratase — —
Escherichia coli BW25113 0.20 b0425 panE 2-dehydropantoate 2-reductase (NCBI) 0.59 b0126 can carbonic anhydrase (NCBI) — —
Escherichia coli ECOR38 0.20 HEPCGN_07025 panE 2-dehydropantoate 2-reductase 0.59 HEPCGN_08420 can carbonate dehydratase — —
Escherichia coli ECRC98 0.20 JDDGAC_12050 panE 2-dehydropantoate 2-reductase 0.59 JDDGAC_14035 can carbonate dehydratase — —
Escherichia coli ECRC99 0.20 KEDOAH_19570 panE 2-dehydropantoate 2-reductase 0.59 KEDOAH_17715 can carbonate dehydratase — —
Escherichia coli ECRC101 0.20 MCAODC_27620 panE 2-dehydropantoate 2-reductase 0.59 MCAODC_00955 can carbonate dehydratase — —
Rahnella sp. WP5 0.20 EX31_RS22180 2-dehydropantoate 2-reductase 0.59 EX31_RS03305 carbonate dehydratase low > 89
Escherichia coli ECRC102 0.20 NIAGMN_06450 panE 2-dehydropantoate 2-reductase 0.59 NIAGMN_08290 can carbonate dehydratase — —
Escherichia coli BL21 0.20 ECD_00373 2-dehydropantoate reductase, NADPH-specific 0.59 ECD_00125 carbonic anhydrase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.20 OHPLBJKB_03251 2-dehydropantoate 2-reductase 0.59 OHPLBJKB_03535 Carbonic anhydrase 2 — —
Dickeya dadantii 3937 0.20 DDA3937_RS05555 2-dehydropantoate 2-reductase 0.59 DDA3937_RS15980 carbonate dehydratase — —
Erwinia tracheiphila SCR3 0.20 LU632_RS18455 panE 2-dehydropantoate 2-reductase 0.57 LU632_RS20130 can carbonate dehydratase — —
Escherichia coli ECOR27 0.20 NOLOHH_01345 panE 2-dehydropantoate 2-reductase 0.59 NOLOHH_02785 can carbonate dehydratase — —
Escherichia coli ECRC62 0.20 BNILDI_22760 panE 2-dehydropantoate 2-reductase 0.59 BNILDI_08885 can carbonate dehydratase — —
Escherichia fergusonii Becca 0.20 EFB2_03632 2-dehydropantoate 2-reductase 0.59 EFB2_03919 Carbonic anhydrase 2 — —
Dickeya dianthicola 67-19 0.20 HGI48_RS05615 2-dehydropantoate 2-reductase 0.59 HGI48_RS16095 carbonate dehydratase — —
Pantoea sp. MT58 0.20 IAI47_14715 2-dehydropantoate 2-reductase 0.58 IAI47_15685 carbonate dehydratase low > 76
Pectobacterium carotovorum WPP14 0.19 HER17_RS15910 2-dehydropantoate 2-reductase 0.59 HER17_RS05535 carbonate dehydratase — —
Shewanella amazonensis SB2B 0.18 Sama_2559 2-dehydropantoate 2-reductase (RefSeq) 0.58 Sama_1642 carbonate dehydratase (RefSeq) — —
Ralstonia sp. UNC404CL21Col 0.16 ABZR87_RS15450 2-dehydropantoate 2-reductase 0.57 ABZR87_RS06310 carbonate dehydratase low > 80
Cupriavidus basilensis FW507-4G11 0.14 RR42_RS32960 2-dehydropantoate 2-reductase 0.54 RR42_RS00880 carbonate dehydratase — —

Not shown: 4 genomes with orthologs for Psyr_4088 only; 24 genomes with orthologs for Psyr_0859 only