Conservation of cofitness between Psyr_1547 and Psyr_0515 in Pseudomonas syringae pv. syringae B728a

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_1547 glycine cleavage system transcriptional repressor 1.0 Psyr_0515 HI0933-like protein 0.36 12
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_1547 glycine cleavage system transcriptional repressor 1.00 Psyr_0515 HI0933-like protein low > 86
Pseudomonas simiae WCS417 0.92 PS417_07160 glycine cleavage system protein R 0.88 PS417_26375 membrane protein low > 88
Pseudomonas fluorescens FW300-N2E3 0.92 AO353_17665 glycine cleavage system protein R 0.90 AO353_07855 hypothetical protein low > 101
Pseudomonas fluorescens FW300-N2C3 0.92 AO356_04535 glycine cleavage system protein R 0.90 AO356_13765 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N1B4 0.92 Pf1N1B4_3331 Glycine cleavage system transcriptional antiactivator GcvR 0.89 Pf1N1B4_2411 FIG00953568: hypothetical protein low > 87
Pseudomonas sp. RS175 0.91 PFR28_00698 Glycine cleavage system transcriptional repressor 0.90 PFR28_04173 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2E2 0.91 Pf6N2E2_2748 Glycine cleavage system transcriptional antiactivator GcvR 0.90 Pf6N2E2_4672 FIG00953568: hypothetical protein low > 103
Pseudomonas fluorescens SBW25 0.91 PFLU_RS07270 glycine cleavage system protein R 0.88 PFLU_RS28025 NAD(P)/FAD-dependent oxidoreductase low > 109
Pseudomonas fluorescens SBW25-INTG 0.91 PFLU_RS07270 glycine cleavage system protein R 0.88 PFLU_RS28025 NAD(P)/FAD-dependent oxidoreductase low > 109
Pseudomonas fluorescens GW456-L13 0.91 PfGW456L13_4508 Glycine cleavage system transcriptional antiactivator GcvR 0.89 PfGW456L13_1077 FIG00953568: hypothetical protein low > 87
Pseudomonas stutzeri RCH2 0.86 Psest_1514 Glycine cleavage system regulatory protein 0.81 Psest_0341 flavoprotein, HI0933 family low > 67
Pseudomonas putida KT2440 0.81 PP_1236 putative Glycine cleavage system transcriptional repressor 0.79 PP_4953 putative oxidoreductase with FAD/NAD(P)-binding domain low > 96
Pseudomonas sp. S08-1 0.80 OH686_19210 Glycine cleavage system transcriptional antiactivator GcvR 0.76 OH686_10655 Uncharacterized protein YhiN low > 80
Rhodanobacter denitrificans MT42 0.31 LRK55_RS14795 glycine cleavage system protein R 0.60 LRK55_RS14395 NAD(P)/FAD-dependent oxidoreductase low > 63
Rhodanobacter denitrificans FW104-10B01 0.31 LRK54_RS15080 glycine cleavage system protein R 0.58 LRK54_RS14680 NAD(P)/FAD-dependent oxidoreductase low > 59
Dyella japonica UNC79MFTsu3.2 0.29 ABZR86_RS00780 glycine cleavage system protein R 0.59 ABZR86_RS00415 NAD(P)/FAD-dependent oxidoreductase low > 74
Xanthomonas campestris pv. campestris strain 8004 0.28 Xcc-8004.3086.1 Glycine cleavage system transcriptional antiactivator GcvR 0.59 Xcc-8004.2264.1 FIG01211838: hypothetical protein — —
Lysobacter sp. OAE881 0.28 ABIE51_RS07990 glycine cleavage system protein R 0.61 ABIE51_RS09810 NAD(P)/FAD-dependent oxidoreductase low > 62
Shewanella loihica PV-4 0.15 Shew_1847 amino acid-binding ACT domain-containing protein (RefSeq) 0.54 Shew_3802 hypothetical protein (RefSeq) — —
Enterobacter asburiae PDN3 0.15 EX28DRAFT_0181 Glycine cleavage system regulatory protein 0.55 EX28DRAFT_4070 flavoprotein, HI0933 family low > 76
Vibrio cholerae E7946 ATCC 55056 0.15 CSW01_10760 glycine cleavage system transcriptional regulator 0.54 CSW01_00430 NAD(P)/FAD-dependent oxidoreductase low > 62
Rahnella sp. WP5 0.14 EX31_RS22735 glycine cleavage system transcriptional repressor 0.56 EX31_RS05140 NAD(P)/FAD-dependent oxidoreductase low > 89
Escherichia coli Nissle 1917 0.14 ECOLIN_RS14150 glycine cleavage system transcriptional repressor 0.53 ECOLIN_RS19955 NAD(P)/FAD-dependent oxidoreductase low > 55
Escherichia coli ECRC99 0.14 KEDOAH_06310 gcvR glycine cleavage system transcriptional repressor 0.54 KEDOAH_11700 yhiN Uncharacterized protein YhiN — —
Escherichia coli BL21 0.14 ECD_02371 transcriptional repressor, regulatory protein accessory to GcvA 0.53 ECD_03341 putative oxidoreductase low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.14 OHPLBJKB_01250 Glycine cleavage system transcriptional repressor 0.53 OHPLBJKB_00211 hypothetical protein low > 73
Escherichia coli ECRC98 0.14 JDDGAC_25855 gcvR glycine cleavage system transcriptional repressor 0.54 JDDGAC_20075 yhiN Uncharacterized protein YhiN low > 86
Escherichia coli ECRC102 0.14 NIAGMN_19680 gcvR glycine cleavage system transcriptional repressor 0.54 NIAGMN_14210 yhiN Uncharacterized protein YhiN — —
Escherichia coli BW25113 0.14 b2479 gcvR transcriptional regulation of gcv operon (VIMSS) 0.53 b3492 yhiN predicted oxidoreductase with FAD/NAD(P)-binding domain (NCBI) low > 76
Escherichia coli ECOR38 0.14 HEPCGN_21080 gcvR glycine cleavage system transcriptional repressor 0.53 HEPCGN_15360 yhiN Uncharacterized protein YhiN 0.68 31
Escherichia coli ECOR27 0.14 NOLOHH_13570 gcvR glycine cleavage system transcriptional repressor 0.53 NOLOHH_08380 yhiN Uncharacterized protein YhiN low > 75
Escherichia coli ECRC62 0.14 BNILDI_12380 gcvR glycine cleavage system transcriptional repressor 0.53 BNILDI_03180 yhiN Uncharacterized protein YhiN low > 75
Escherichia fergusonii Becca 0.14 EFB2_01407 Glycine cleavage system transcriptional repressor 0.53 EFB2_00323 hypothetical protein low > 86
Escherichia coli ECRC101 0.14 MCAODC_12440 gcvR glycine cleavage system transcriptional repressor 0.54 MCAODC_06960 yhiN Uncharacterized protein YhiN low > 87
Escherichia coli ECRC100 0.14 OKFHMN_21910 gcvR glycine cleavage system transcriptional repressor 0.54 OKFHMN_16445 yhiN Uncharacterized protein YhiN low > 80
Enterobacter sp. TBS_079 0.14 MPMX20_03341 Glycine cleavage system transcriptional repressor 0.55 MPMX20_04392 hypothetical protein low > 85
Shewanella amazonensis SB2B 0.14 Sama_1909 glycine cleavage system transcriptional repressor, putative (RefSeq) 0.53 Sama_0064 hypothetical protein (RefSeq) low > 62
Erwinia tracheiphila SCR3 0.14 LU632_RS08320 glycine cleavage system transcriptional repressor 0.52 LU632_RS19445 NAD(P)/FAD-dependent oxidoreductase low > 74
Shewanella oneidensis MR-1 0.14 SO1878 glycine cleavage system transcriptional repressor, putative (NCBI ptt file) 0.54 SO0054 conserved hypothetical protein TIGR00275 (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.14 Shewana3_1655 glycine cleavage system transcriptional repressor, putative (RefSeq) 0.54 Shewana3_0055 hypothetical protein (RefSeq) low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.13 GFF2179 Glycine cleavage system transcriptional antiactivator GcvR 0.56 GFF523 NAD(FAD)-utilizing dehydrogenases low > 78

Not shown: 0 genomes with orthologs for Psyr_1547 only; 45 genomes with orthologs for Psyr_0515 only