Conservation of cofitness between Psyr_2579 and Psyr_0407 in Pseudomonas syringae pv. syringae B728a

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_2579 Aldehyde dehydrogenase 1.0 Psyr_0407 type II and III secretion system protein:NolW-like protein:NolW-like protein 0.38 8
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_2579 Aldehyde dehydrogenase 1.00 Psyr_0407 type II and III secretion system protein:NolW-like protein:NolW-like protein low > 86
Pseudomonas stutzeri RCH2 0.49 Psest_0247 NAD-dependent aldehyde dehydrogenases 0.70 Psest_3715 type IV pilus secretin (or competence protein) PilQ low > 67
Pseudomonas sp. RS175 0.49 PFR28_04266 Coniferyl aldehyde dehydrogenase 0.75 PFR28_05011 Type 3 secretion system secretin low > 88
Pseudomonas fluorescens FW300-N2E2 0.48 Pf6N2E2_4575 Coniferyl aldehyde dehydrogenase (EC 1.2.1.68) 0.75 Pf6N2E2_3756 Type IV pilus biogenesis protein PilQ low > 103
Pseudomonas fluorescens FW300-N2E3 0.48 AO353_08290 coniferyl aldehyde dehydrogenase 0.77 AO353_12495 fimbrial protein low > 101
Pseudomonas fluorescens FW300-N2C3 0.48 AO356_13300 coniferyl aldehyde dehydrogenase 0.76 AO356_09395 fimbrial protein low > 104
Pseudomonas sp. S08-1 0.48 OH686_14170 Aldehyde dehydrogenase / Probable coniferyl aldehyde dehydrogenase 0.68 OH686_10025 Type IV pilus biogenesis protein PilQ low > 80
Pseudomonas fluorescens FW300-N1B4 0.48 Pf1N1B4_2315 Aldehyde dehydrogenase (EC 1.2.1.3); Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68) 0.76 Pf1N1B4_1539 Type IV pilus biogenesis protein PilQ low > 87
Pseudomonas fluorescens GW456-L13 0.48 PfGW456L13_985 Aldehyde dehydrogenase (EC 1.2.1.3); Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68) 0.75 PfGW456L13_277 Type IV pilus biogenesis protein PilQ low > 87
Marinobacter adhaerens HP15 0.48 HP15_3329 NAD-dependent aldehyde dehydrogenase 0.44 HP15_478 type 4 fimbrial biogenesis protein PilQ low > 73
Pseudomonas aeruginosa PA14 0.47 IKLFDK_23600 putative coniferyl aldehyde dehydrogenase 0.71 IKLFDK_28330 type 4a pilus secretin PilQ low > 100
Pseudomonas sp. DMC3 0.47 GFF233 Coniferyl aldehyde dehydrogenase 0.74 GFF3098 Type IV pilus biogenesis and competence protein PilQ low > 89
Shewanella loihica PV-4 0.47 Shew_3103 aldehyde dehydrogenase (RefSeq) 0.32 Shew_0212 type IV pilus secretin PilQ (RefSeq) low > 60
Pseudomonas segetis P6 0.47 MPMX49_04421 Coniferyl aldehyde dehydrogenase 0.70 MPMX49_04235 Type IV pilus biogenesis and competence protein PilQ low > 75
Ralstonia sp. UNC404CL21Col 0.46 ABZR87_RS04755 coniferyl aldehyde dehydrogenase 0.34 ABZR87_RS02600 temperature dependent type IV pilus secretin PilQ low > 80
Shewanella oneidensis MR-1 0.46 SO3683 coniferyl aldehyde dehydrogenase (NCBI ptt file) 0.32 SO0285 type IV pilus biogenesis protein PilQ (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.45 Sama_2855 coniferyl aldehyde dehydrogenase (RefSeq) 0.31 Sama_3369 type IV pilus biogenesis protein PilQ (RefSeq) low > 62
Shewanella sp. ANA-3 0.45 Shewana3_3251 aldehyde dehydrogenase (RefSeq) 0.32 Shewana3_3895 type IV pilus secretin PilQ (RefSeq) low > 73
Cupriavidus basilensis FW507-4G11 0.44 RR42_RS01275 aldehyde dehydrogenase 0.33 RR42_RS19015 secretin 0.24 121
Variovorax sp. SCN45 0.44 GFF5850 Aldehyde dehydrogenase (EC 1.2.1.3); Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68) 0.33 GFF5323 Type IV pilus biogenesis protein PilQ low > 127
Herbaspirillum seropedicae SmR1 0.42 HSERO_RS23860 coniferyl aldehyde dehydrogenase 0.27 HSERO_RS20915 secretin low > 78
Acinetobacter baumannii LAC-4 0.42 RR41_RS16730 coniferyl aldehyde dehydrogenase 0.33 RR41_RS01575 type IV pilus secretin PilQ low > 55
Acinetobacter radioresistens SK82 0.42 MPMX26_00376 Coniferyl aldehyde dehydrogenase 0.35 MPMX26_02812 Type 3 secretion system secretin low > 36
Kangiella aquimarina DSM 16071 0.42 B158DRAFT_0768 NAD-dependent aldehyde dehydrogenases 0.37 B158DRAFT_0762 type IV pilus secretin (or competence protein) PilQ low > 40
Acidovorax sp. GW101-3H11 0.42 Ac3H11_1472 Aldehyde dehydrogenase (EC 1.2.1.3); Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68) 0.33 Ac3H11_4703 Type IV pilus biogenesis protein PilQ low > 79
Variovorax sp. OAS795 0.41 ABID97_RS26110 coniferyl aldehyde dehydrogenase 0.33 ABID97_RS23265 type IV pilus secretin PilQ low > 91
Dyella japonica UNC79MFTsu3.2 0.40 ABZR86_RS12980 coniferyl aldehyde dehydrogenase 0.31 ABZR86_RS11790 type IV pilus secretin PilQ low > 74
Hydrogenophaga sp. GW460-11-11-14-LB1 0.40 GFF3943 Aldehyde dehydrogenase (EC 1.2.1.3); Probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68) 0.35 GFF1333 Type IV pilus biogenesis protein PilQ low > 90
Rhodanobacter sp000427505 FW510-R12 0.40 LRK53_RS01255 coniferyl aldehyde dehydrogenase 0.30 LRK53_RS16685 type IV pilus secretin PilQ low > 59
Lysobacter sp. OAE881 0.40 ABIE51_RS01765 coniferyl aldehyde dehydrogenase 0.26 ABIE51_RS17165 type IV pilus secretin PilQ family protein low > 62
Rhodanobacter sp. FW510-T8 0.39 OKGIIK_16495 Aldehyde dehydrogenase 0.31 OKGIIK_12040 pilQ type IV pilus secretin PilQ low > 53
Rhodanobacter denitrificans MT42 0.38 LRK55_RS06880 coniferyl aldehyde dehydrogenase 0.31 LRK55_RS11580 type IV pilus secretin PilQ low > 63
Rhodanobacter denitrificans FW104-10B01 0.38 LRK54_RS07140 coniferyl aldehyde dehydrogenase 0.31 LRK54_RS11855 type IV pilus secretin PilQ low > 59

Not shown: 32 genomes with orthologs for Psyr_2579 only; 6 genomes with orthologs for Psyr_0407 only