Conservation of cofitness between Psyr_5064 and Psyr_0147 in Pseudomonas syringae pv. syringae B728a

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_5064 transcriptional regulator, RpiR family 1.0 Psyr_0147 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein 0.37 7
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_5064 transcriptional regulator, RpiR family 1.00 Psyr_0147 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein low > 86
Pseudomonas sp. BP01 0.94 JOY50_RS08750 hexR transcriptional regulator HexR 0.29 JOY50_RS06840 glyoxylate/hydroxypyruvate reductase A low > 84
Pseudomonas fluorescens FW300-N2C3 0.94 AO356_12005 transcriptional regulator 0.78 AO356_26720 hydroxyacid dehydrogenase low > 104
Pseudomonas fluorescens FW300-N2E2 0.94 Pf6N2E2_4276 Phosphogluconate repressor HexR, RpiR family 0.78 Pf6N2E2_372 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) low > 103
Pseudomonas fluorescens SBW25-INTG 0.94 PFLU_RS29890 transcriptional regulator HexR 0.77 PFLU_RS19730 glyoxylate/hydroxypyruvate reductase A low > 109
Pseudomonas lactucae CFBP13502 0.94 GEMAOFIL_00114 HTH-type transcriptional regulator HexR 0.77 GEMAOFIL_03841 Glyoxylate/hydroxypyruvate reductase A low > 96
Pseudomonas fluorescens SBW25 0.94 PFLU_RS29890 transcriptional regulator HexR 0.77 PFLU_RS19730 glyoxylate/hydroxypyruvate reductase A low > 109
Pseudomonas fluorescens GW456-L13 0.93 PfGW456L13_726 Phosphogluconate repressor HexR, RpiR family 0.30 PfGW456L13_2327 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) low > 87
Pseudomonas fluorescens FW300-N2E3 0.93 AO353_10040 transcriptional regulator 0.78 AO353_28220 hydroxyacid dehydrogenase low > 101
Pseudomonas fluorescens FW300-N1B4 0.92 Pf1N1B4_2008 Phosphogluconate repressor HexR, RpiR family 0.77 Pf1N1B4_4909 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) — —
Pseudomonas stutzeri RCH2 0.91 Psest_4088 Transcriptional regulators 0.30 Psest_2788 Phosphoglycerate dehydrogenase and related dehydrogenases low > 67
Azospirillum brasilense Sp245 0.42 AZOBR_RS30190 transcriptional regulator 0.40 AZOBR_RS03790 D-2-hydroxyacid dehydrogenase low > 97
Sinorhizobium meliloti 1021 0.41 SMc02460 hypothetical protein 0.44 SMa1838 dehydrogenase low > 103
Herbaspirillum seropedicae SmR1 0.41 HSERO_RS05505 transcriptional regulator 0.55 HSERO_RS05655 D-2-hydroxyacid dehydrogenase low > 78
Paraburkholderia graminis OAS925 0.40 ABIE53_003518 RpiR family carbohydrate utilization transcriptional regulator 0.55 ABIE53_005027 glyoxylate/hydroxypyruvate reductase A low > 113
Cupriavidus basilensis FW507-4G11 0.40 RR42_RS06120 transcriptional regulator 0.36 RR42_RS27410 hydroxyacid dehydrogenase low > 128
Burkholderia phytofirmans PsJN 0.40 BPHYT_RS16740 transcriptional regulator 0.52 BPHYT_RS30215 D-2-hydroxyacid dehydrogenase — —
Castellaniella sp019104865 MT123 0.39 ABCV34_RS08655 SIS domain-containing protein 0.25 ABCV34_RS06730 glyoxylate/hydroxypyruvate reductase A low > 48
Azospirillum sp. SherDot2 0.39 MPMX19_04844 HTH-type transcriptional regulator HexR 0.46 MPMX19_06853 Glyoxylate/hydroxypyruvate reductase A low > 112
Paraburkholderia bryophila 376MFSha3.1 0.38 H281DRAFT_04279 transcriptional regulator, RpiR family 0.54 H281DRAFT_06341 glyoxylate/hydroxypyruvate reductase A low > 103
Paraburkholderia sabiae LMG 24235 0.36 QEN71_RS26925 MurR/RpiR family transcriptional regulator 0.56 QEN71_RS32025 glyoxylate/hydroxypyruvate reductase A low > 153
Hydrogenophaga sp. GW460-11-11-14-LB1 0.36 GFF1364 Phosphogluconate repressor HexR, RpiR family 0.32 GFF1710 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) low > 90
Acidovorax sp. GW101-3H11 0.36 Ac3H11_2055 Probable transcriptional regulator 0.31 Ac3H11_3017 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) low > 79
Ralstonia solanacearum IBSBF1503 0.27 RALBFv3_RS16405 MurR/RpiR family transcriptional regulator 0.54 RALBFv3_RS18895 glyoxylate/hydroxypyruvate reductase A low > 76
Ralstonia solanacearum UW163 0.27 UW163_RS17145 MurR/RpiR family transcriptional regulator 0.54 UW163_RS20235 glyoxylate/hydroxypyruvate reductase A — —
Ralstonia solanacearum GMI1000 0.26 RS_RS24600 MurR/RpiR family transcriptional regulator 0.32 RS_RS01285 glyoxylate/hydroxypyruvate reductase A low > 80
Ralstonia solanacearum PSI07 0.26 RPSI07_RS07300 MurR/RpiR family transcriptional regulator 0.55 RPSI07_RS04655 glyoxylate/hydroxypyruvate reductase A low > 81
Ralstonia sp. UNC404CL21Col 0.26 ABZR87_RS22900 MurR/RpiR family transcriptional regulator 0.56 ABZR87_RS21550 glyoxylate/hydroxypyruvate reductase A low > 80
Variovorax sp. SCN45 0.21 GFF6715 Transcriptional regulator of RpiR family in catabolic operon 0.32 GFF2017 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) low > 127
Variovorax sp. OAS795 0.21 ABID97_RS22860 MurR/RpiR family transcriptional regulator 0.56 ABID97_RS25755 glyoxylate/hydroxypyruvate reductase A low > 91

Not shown: 13 genomes with orthologs for Psyr_5064 only; 35 genomes with orthologs for Psyr_0147 only