Conservation of cofitness between Pf6N2E2_158 and Pf6N2E2_4273 in Pseudomonas fluorescens FW300-N2E2

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N2E2 1.0 Pf6N2E2_158 Endonuclease I precursor (EC 3.1.21.1) 1.0 Pf6N2E2_4273 ATP-dependent DNA helicase UvrD/PcrA 0.36 2
Pseudomonas fluorescens FW300-N2C3 0.99 AO356_00985 deoxyribonuclease 0.99 AO356_11990 DNA helicase II 0.65 3
Pseudomonas sp. RS175 0.98 PFR28_02739 Extracellular deoxyribonuclease 0.96 PFR28_04523 DNA helicase II low > 88
Pseudomonas sp. DMC3 0.94 GFF893 Extracellular deoxyribonuclease 0.93 GFF512 DNA helicase II low > 89
Pseudomonas fluorescens GW456-L13 0.93 PfGW456L13_3916 Endonuclease I precursor (EC 3.1.21.1) 0.94 PfGW456L13_724 ATP-dependent DNA helicase UvrD/PcrA 0.33 27
Pseudomonas fluorescens FW300-N1B4 0.92 Pf1N1B4_6039 Endonuclease I precursor (EC 3.1.21.1) 0.93 Pf1N1B4_2005 ATP-dependent DNA helicase UvrD/PcrA low > 87
Pseudomonas fluorescens SBW25 0.89 PFLU_RS20395 deoxyribonuclease 0.93 PFLU_RS29900 DNA helicase II low > 109
Pseudomonas fluorescens SBW25-INTG 0.89 PFLU_RS20395 deoxyribonuclease 0.93 PFLU_RS29900 DNA helicase II low > 109
Pseudomonas fluorescens FW300-N2E3 0.89 AO353_20795 deoxyribonuclease 0.94 AO353_10055 DNA helicase II low > 101
Pseudomonas orientalis W4I3 0.88 QF045_RS20570 endonuclease I family protein 0.93 QF045_RS02600 DNA helicase II 0.45 26
Pseudomonas lactucae CFBP13502 0.87 GEMAOFIL_03914 Extracellular deoxyribonuclease 0.93 GEMAOFIL_00116 DNA helicase II low > 96
Pseudomonas syringae pv. syringae B728a 0.84 Psyr_2148 Deoxyribonuclease I 0.88 Psyr_5065 ATP-dependent DNA helicase UvrD low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.84 Psyr_2148 Deoxyribonuclease I 0.88 Psyr_5065 ATP-dependent DNA helicase UvrD low > 86
Pseudomonas sp. SVBP6 0.84 COO64_RS10310 endonuclease 0.89 COO64_RS01845 uvrD DNA helicase II low > 93
Pseudomonas putida KT2440 0.83 PP_2451 extracellular DNA endonuclease 0.87 PP_5352 DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex low > 96
Pseudomonas sp. BP01 0.83 JOY50_RS04250 endonuclease 0.87 JOY50_RS08735 uvrD DNA helicase II low > 84
Pseudomonas aeruginosa MRSN321 0.73 DY961_RS03410 endonuclease I family protein 0.84 DY961_RS25505 uvrD;go_function=DNA DNA helicase II low > 100
Pseudomonas aeruginosa PA14 0.73 IKLFDK_13855 deoxyribonuclease 0.84 IKLFDK_26200 DNA helicase II 0.33 3
Pseudomonas aeruginosa PUPa3 0.73 DQ20_RS32225 endonuclease I family protein 0.85 DQ20_RS57955 uvrD;go_function=DNA DNA helicase II low > 101
Pseudomonas sp. S08-1 0.69 OH686_20125 Endonuclease I precursor 0.82 OH686_13045 ATP-dependent DNA helicase UvrD/PcrA low > 80
Pseudomonas segetis P6 0.68 ACVTMO_RS07865 endonuclease 0.83 ACVTMO_RS00885 uvrD DNA helicase II low > 75
Pseudomonas stutzeri RCH2 0.63 Psest_1274 Endonuclease I 0.79 Psest_4098 Superfamily I DNA and RNA helicases low > 67
Vibrio cholerae E7946 ATCC 55056 0.48 CSW01_02500 deoxyribonuclease 0.60 CSW01_01015 DNA helicase II low > 62
Shewanella amazonensis SB2B 0.48 Sama_0576 deoxyribonuclease I (RefSeq) 0.61 Sama_0419 uvrD DNA-dependent helicase II (RefSeq) low > 62
Enterobacter sp. TBS_079 0.47 MPMX20_03803 Endonuclease-1 0.63 MPMX20_04463 DNA helicase II low > 85
Shewanella loihica PV-4 0.47 Shew_3223 deoxyribonuclease I (RefSeq) 0.60 Shew_3385 uvrD DNA-dependent helicase II (RefSeq) low > 60
Enterobacter asburiae PDN3 0.47 EX28DRAFT_2983 Endonuclease I 0.64 EX28DRAFT_4482 ATP-dependent DNA helicase UvrD (EC 3.6.1.-) low > 76
Serratia liquefaciens MT49 0.47 IAI46_21380 deoxyribonuclease I 0.63 IAI46_00735 DNA helicase II low > 87
Klebsiella michiganensis M5al 0.47 BWI76_RS24065 deoxyribonuclease I 0.63 BWI76_RS01220 DNA-dependent helicase II low > 92
Pantoea sp. MT58 0.47 IAI47_03625 deoxyribonuclease I 0.61 IAI47_18390 DNA helicase II low > 76
Klebsiella pneumoniae MKP103 0.46 KDGMDA_04580 deoxyribonuclease I 0.63 KDGMDA_09710 DNA helicase II low > 95
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.46 GFF3047 Endonuclease I precursor (EC 3.1.21.1) @ Extracellular deoxyribonuclease Dns (EC 3.1.21.-) 0.63 GFF241 ATP-dependent DNA helicase UvrD/PcrA 0.44 24
Pantoea agglomerans CFBP13505 P0401 0.46 PagCFBP13505_RS16070 deoxyribonuclease I 0.61 PagCFBP13505_RS15370 DNA helicase II low > 74
Escherichia coli Nissle 1917 0.45 ECOLIN_RS16385 deoxyribonuclease I 0.63 ECOLIN_RS21885 DNA helicase II low > 55
Escherichia fergusonii Becca 0.45 EFB2_00957 Endonuclease-1 0.63 EFB2_04824 DNA helicase II low > 86
Escherichia coli ECRC98 0.45 JDDGAC_22915 endA deoxyribonuclease I 0.63 JDDGAC_18035 uvrD DNA helicase II low > 87
Escherichia coli ECRC102 0.45 NIAGMN_17050 endA deoxyribonuclease I 0.63 NIAGMN_12165 uvrD DNA helicase II low > 80
Dickeya dadantii 3937 0.45 DDA3937_RS18550 deoxyribonuclease I 0.63 DDA3937_RS19880 DNA helicase II low > 74
Escherichia coli BL21 0.45 ECD_02775 DNA-specific endonuclease I 0.63 ECD_03689 DNA-dependent ATPase I and helicase II — —
Escherichia coli ECOR38 0.45 HEPCGN_18590 endA deoxyribonuclease I 0.63 HEPCGN_13115 uvrD DNA helicase II low > 88
Escherichia coli HS(pFamp)R (ATCC 700891) 0.45 OHPLBJKB_00773 Endonuclease-1 0.63 OHPLBJKB_04237 DNA helicase II low > 74
Escherichia coli ECRC101 0.45 MCAODC_09805 endA deoxyribonuclease I 0.63 MCAODC_04915 uvrD DNA helicase II low > 87
Escherichia coli ECOR27 0.45 NOLOHH_11155 endA deoxyribonuclease I 0.63 NOLOHH_06540 uvrD DNA helicase II low > 76
Escherichia coli BW25113 0.45 b2945 endA DNA-specific endonuclease I (NCBI) 0.63 b3813 uvrD DNA-dependent ATPase I and helicase II (NCBI) low > 76
Escherichia coli ECRC100 0.45 OKFHMN_19285 endA deoxyribonuclease I 0.63 OKFHMN_14410 uvrD DNA helicase II low > 79
Escherichia coli ECRC99 0.45 KEDOAH_08855 endA deoxyribonuclease I 0.63 KEDOAH_13740 uvrD DNA helicase II — —
Escherichia coli ECRC62 0.45 BNILDI_09735 endA deoxyribonuclease I 0.63 BNILDI_04995 uvrD DNA helicase II low > 75
Dickeya dianthicola ME23 0.45 DZA65_RS19620 deoxyribonuclease I 0.63 DZA65_RS21080 DNA helicase II low > 75
Shewanella oneidensis MR-1 0.45 SO0833 endA endonuclease I (NCBI ptt file) 0.61 SO0467 uvrD DNA helicase II (NCBI ptt file) low > 76
Pectobacterium carotovorum WPP14 0.44 HER17_RS02645 deoxyribonuclease I 0.63 HER17_RS01360 DNA helicase II low > 75
Dickeya dianthicola 67-19 0.44 HGI48_RS18485 deoxyribonuclease I 0.63 HGI48_RS20035 DNA helicase II low > 71
Shewanella sp. ANA-3 0.44 Shewana3_3443 endonuclease I (RefSeq) 0.61 Shewana3_0469 uvrD DNA-dependent helicase II (RefSeq) low > 73
Erwinia amylovora T8 0.44 OLJFJH_08580 deoxyribonuclease I 0.61 OLJFJH_06425 DNA helicase II 0.51 48
Rahnella sp. WP5 0.44 EX31_RS02655 deoxyribonuclease I 0.61 EX31_RS15175 DNA helicase II low > 89
Erwinia tracheiphila HP pepo 2.2 0.41 IJEDHG_03420 endA deoxyribonuclease I 0.62 IJEDHG_08770 uvrD DNA helicase II — —

Not shown: 1 genomes with orthologs for Pf6N2E2_158 only; 58 genomes with orthologs for Pf6N2E2_4273 only