Conservation of cofitness between Pf1N1B4_1185 and Pf1N1B4_3270 in Pseudomonas fluorescens FW300-N1B4

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N1B4 1.0 Pf1N1B4_1185 Lactate-responsive regulator LldR in Enterobacteria, GntR family 1.0 Pf1N1B4_3270 Alcohol dehydrogenase (EC 1.1.1.1) 0.50 13
Pseudomonas fluorescens FW300-N2E3 0.95 AO353_05695 transcriptional regulator PdhR 0.90 AO353_17425 lactaldehyde reductase low > 101
Pseudomonas fluorescens FW300-N2C3 0.95 AO356_07545 transcriptional regulator PdhR 0.91 AO356_04765 lactaldehyde reductase low > 104
Pseudomonas fluorescens FW300-N2E2 0.94 Pf6N2E2_3379 Lactate-responsive regulator LldR in Enterobacteria, GntR family 0.92 Pf6N2E2_2802 Alcohol dehydrogenase (EC 1.1.1.1) 0.42 4
Pseudomonas fluorescens SBW25 0.94 PFLU_RS25940 FCD domain-containing protein 0.89 PFLU_RS06965 L-threonine dehydrogenase low > 109
Pseudomonas fluorescens SBW25-INTG 0.94 PFLU_RS25940 FCD domain-containing protein 0.89 PFLU_RS06965 L-threonine dehydrogenase low > 109
Pseudomonas sp. RS175 0.93 PFR28_00064 Pyruvate dehydrogenase complex repressor 0.87 PFR28_00654 Alcohol dehydrogenase 2 low > 88
Pseudomonas simiae WCS417 0.89 PS417_24100 transcriptional regulator PdhR 0.90 PS417_06905 alcohol dehydrogenase low > 88
Pseudomonas stutzeri RCH2 0.79 Psest_0956 Transcriptional regulators 0.80 Psest_0672 Alcohol dehydrogenase, class IV low > 67
Klebsiella michiganensis M5al 0.42 BWI76_RS04875 transcriptional regulator PdhR 0.40 BWI76_RS00645 lactaldehyde reductase low > 92
Escherichia coli ECRC100 0.42 OKFHMN_10510 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR 0.69 OKFHMN_15855 yiaY L-threonine dehydrogenase low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.42 OHPLBJKB_03548 Pyruvate dehydrogenase complex repressor 0.69 OHPLBJKB_00114 Alcohol dehydrogenase 2 low > 73
Escherichia fergusonii Becca 0.42 EFB2_03932 Pyruvate dehydrogenase complex repressor 0.69 EFB2_00220 Alcohol dehydrogenase 2 low > 86
Escherichia coli ECRC99 0.42 KEDOAH_17645 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR 0.69 KEDOAH_12295 yiaY L-threonine dehydrogenase — —
Escherichia coli BW25113 0.42 b0113 pdhR transcriptional regulator of pyruvate dehydrogenase complex (NCBI) 0.69 b3589 yiaY predicted Fe-containing alcohol dehydrogenase (NCBI) low > 76
Escherichia coli ECRC101 0.42 MCAODC_01025 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR 0.69 MCAODC_06370 yiaY L-threonine dehydrogenase low > 87
Escherichia coli ECRC98 0.42 JDDGAC_14105 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR 0.69 JDDGAC_19485 yiaY L-threonine dehydrogenase low > 86
Escherichia coli ECOR27 0.42 NOLOHH_02855 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR 0.69 NOLOHH_07750 yiaY L-threonine dehydrogenase low > 75
Escherichia coli ECRC62 0.42 BNILDI_08755 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR 0.69 BNILDI_03780 yiaY L-threonine dehydrogenase low > 75
Escherichia coli ECOR38 0.42 HEPCGN_08490 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR 0.69 HEPCGN_14690 yiaY L-threonine dehydrogenase low > 87
Escherichia coli Nissle 1917 0.42 ECOLIN_RS00635 pyruvate dehydrogenase complex transcriptional repressor PdhR 0.70 ECOLIN_RS20505 L-threonine dehydrogenase low > 55
Escherichia coli BL21 0.42 ECD_00112 pyruvate dehydrogenase complex repressor; autorepressor 0.69 ECD_03444 L-threonine dehydrogenase low > 61
Escherichia coli ECRC102 0.42 NIAGMN_08360 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR 0.69 NIAGMN_13615 yiaY L-threonine dehydrogenase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.42 GFF123 Transcriptional repressor for pyruvate dehydrogenase complex 0.40 GFF2262 Lactaldehyde dehydrogenase involved in fucose or rhamnose utilization (EC 1.2.1.22) low > 78
Shewanella sp. ANA-3 0.42 Shewana3_0425 pdhR transcriptional regulator PdhR (RefSeq) 0.68 Shewana3_2938 iron-containing alcohol dehydrogenase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.42 SO0423 pdhR pyruvate dehydrogenase complex repressor (NCBI ptt file) 0.68 SO1490 adhB alcohol dehydrogenase II (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.41 Sama_0374 pdhR transcriptional regulator PdhR (RefSeq) 0.68 Sama_2455 alcohol dehydrogenase II (RefSeq) low > 62
Shewanella loihica PV-4 0.41 Shew_3432 pdhR transcriptional regulator PdhR (RefSeq) 0.69 Shew_1166 iron-containing alcohol dehydrogenase (RefSeq) low > 60
Serratia liquefaciens MT49 0.41 IAI46_21330 pyruvate dehydrogenase complex transcriptional repressor PdhR 0.71 IAI46_19495 L-threonine dehydrogenase low > 86
Dickeya dadantii 3937 0.41 DDA3937_RS17930 pyruvate dehydrogenase complex transcriptional repressor PdhR 0.68 DDA3937_RS11900 L-threonine dehydrogenase low > 74
Dickeya dianthicola ME23 0.40 DZA65_RS19005 pyruvate dehydrogenase complex transcriptional repressor PdhR 0.70 DZA65_RS12440 L-threonine dehydrogenase low > 75
Dickeya dianthicola 67-19 0.40 HGI48_RS17855 pyruvate dehydrogenase complex transcriptional repressor PdhR 0.70 HGI48_RS11990 L-threonine dehydrogenase low > 71
Erwinia tracheiphila SCR3 0.40 LU632_RS03075 pdhR pyruvate dehydrogenase complex transcriptional repressor PdhR 0.39 LU632_RS21635 fucO lactaldehyde reductase low > 74
Pectobacterium carotovorum WPP14 0.40 HER17_RS03285 pyruvate dehydrogenase complex transcriptional repressor PdhR 0.40 HER17_RS18010 lactaldehyde reductase low > 75
Rahnella sp. WP5 0.39 EX31_RS03485 pyruvate dehydrogenase complex transcriptional repressor PdhR 0.59 EX31_RS00895 iron-containing alcohol dehydrogenase low > 89
Pantoea sp. MT58 0.39 IAI47_15815 pyruvate dehydrogenase complex transcriptional repressor PdhR 0.38 IAI47_20590 lactaldehyde reductase low > 76
Burkholderia phytofirmans PsJN 0.31 BPHYT_RS31640 GntR family transcriptional regulator 0.25 BPHYT_RS31860 alcohol dehydrogenase — —
Acinetobacter radioresistens SK82 0.30 MPMX26_02258 Putative L-lactate dehydrogenase operon regulatory protein 0.61 MPMX26_01765 1,3-propanediol dehydrogenase — —
Rhodospirillum rubrum S1H 0.26 Rru_A1414 regulatory protein GntR (NCBI) 0.71 Rru_A0930 Iron-containing alcohol dehydrogenase (NCBI) low > 58
Azospirillum brasilense Sp245 0.25 AZOBR_RS25130 GntR family transcriptional regulator 0.29 AZOBR_RS28580 alcohol dehydrogenase low > 97
Desulfovibrio vulgaris Miyazaki F 0.22 DvMF_1205 GntR domain protein (RefSeq) 0.55 DvMF_0321 iron-containing alcohol dehydrogenase (RefSeq) low > 51
Desulfovibrio vulgaris Hildenborough JW710 0.22 DVU2785 pdhR transcriptional regulator, GntR family (TIGR) 0.55 DVU2405 alcohol dehydrogenase, iron-containing (TIGR) low > 55
Bifidobacterium breve UCC2003 0.13 BBR_RS11160 FadR family transcriptional regulator 0.32 BBR_RS18225 lactaldehyde reductase low > 34

Not shown: 25 genomes with orthologs for Pf1N1B4_1185 only; 11 genomes with orthologs for Pf1N1B4_3270 only