Conservation of cofitness between PP_4989 and PP_5309 in Pseudomonas putida KT2440

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4989 Protein PilJ 1.0 PP_5309 oxidative and nitrosative stress transcriptional dual regulator 0.29 11
Pseudomonas fluorescens FW300-N2C3 0.79 AO356_13495 chemotaxis protein 0.90 AO356_12385 LysR family transcriptional regulator low > 104
Pseudomonas fluorescens FW300-N2E2 0.79 Pf6N2E2_4616 type IV pilus biogenesis protein PilJ 0.93 Pf6N2E2_4353 Hydrogen peroxide-inducible genes activator low > 103
Pseudomonas fluorescens FW300-N2E3 0.78 AO353_08090 chemotaxis protein 0.88 AO353_09315 LysR family transcriptional regulator low > 101
Pseudomonas fluorescens GW456-L13 0.78 PfGW456L13_1025 type IV pilus biogenesis protein PilJ 0.88 PfGW456L13_773 Hydrogen peroxide-inducible genes activator low > 87
Pseudomonas fluorescens SBW25 0.78 PFLU_RS28300 chemotaxis protein 0.88 PFLU_RS29545 hydrogen peroxide-inducible genes activator low > 109
Pseudomonas fluorescens SBW25-INTG 0.78 PFLU_RS28300 chemotaxis protein 0.88 PFLU_RS29545 hydrogen peroxide-inducible genes activator low > 109
Pseudomonas simiae WCS417 0.78 PS417_26655 chemotaxis protein 0.89 PS417_27865 LysR family transcriptional regulator low > 88
Pseudomonas fluorescens FW300-N1B4 0.78 Pf1N1B4_2357 type IV pilus biogenesis protein PilJ 0.89 Pf1N1B4_2106 Hydrogen peroxide-inducible genes activator 0.42 13
Pseudomonas sp. RS175 0.77 PFR28_04228 hypothetical protein 0.90 PFR28_04434 Hydrogen peroxide-inducible genes activator low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.75 Psyr_0491 chemotaxis sensory transducer 0.92 Psyr_0202 transcriptional regulator, LysR family low > 86
Pseudomonas syringae pv. syringae B728a 0.75 Psyr_0491 chemotaxis sensory transducer 0.92 Psyr_0202 transcriptional regulator, LysR family low > 86
Pseudomonas sp. S08-1 0.72 OH686_10895 type IV pilus biogenesis protein PilJ 0.85 OH686_13510 Hydrogen peroxide-inducible genes activator low > 80
Pseudomonas stutzeri RCH2 0.68 Psest_0300 Methyl-accepting chemotaxis protein 0.87 Psest_4191 Transcriptional regulator low > 67
Marinobacter adhaerens HP15 0.55 HP15_3516 methyl-accepting chemotaxis sensory transducer 0.64 HP15_308 oxidative stress regulatory protein OxyR low > 73
Kangiella aquimarina DSM 16071 0.44 B158DRAFT_0185 Methyl-accepting chemotaxis protein 0.54 B158DRAFT_0567 Transcriptional regulator low > 40
Acinetobacter radioresistens SK82 0.40 MPMX26_02510 hypothetical protein 0.27 MPMX26_02334 Hydrogen peroxide-inducible genes activator low > 36
Rhodanobacter sp. FW510-T8 0.40 OKGIIK_11055 chemotaxis protein 0.32 OKGIIK_01995 lysR DNA-binding transcriptional regulator OxyR low > 52
Rhodanobacter denitrificans MT42 0.40 LRK55_RS03950 methyl-accepting chemotaxis protein 0.30 LRK55_RS04545 LysR substrate-binding domain-containing protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.40 LRK54_RS04180 methyl-accepting chemotaxis protein 0.30 LRK54_RS04765 LysR substrate-binding domain-containing protein low > 59
Dyella japonica UNC79MFTsu3.2 0.39 ABZR86_RS10350 methyl-accepting chemotaxis protein 0.30 ABZR86_RS19355 DNA-binding transcriptional regulator OxyR low > 74
Xanthomonas campestris pv. campestris strain 8004 0.37 Xcc-8004.1505.1 pilus biogenesis protein 0.30 Xcc-8004.4224.1 Hydrogen peroxide-inducible genes activator low > 74
Lysobacter sp. OAE881 0.37 ABIE51_RS05230 methyl-accepting chemotaxis protein 0.30 ABIE51_RS05475 LysR substrate-binding domain-containing protein low > 62
Dechlorosoma suillum PS 0.35 Dsui_0657 methyl-accepting chemotaxis protein 0.55 Dsui_0823 transcriptional regulator low > 51
Ralstonia solanacearum UW163 0.31 UW163_RS00975 chemotaxis protein 0.51 UW163_RS08020 hydrogen peroxide-inducible genes activator — —
Ralstonia solanacearum IBSBF1503 0.31 RALBFv3_RS12590 chemotaxis protein 0.51 RALBFv3_RS05605 hydrogen peroxide-inducible genes activator 0.37 69
Ralstonia sp. UNC404CL21Col 0.31 ABZR87_RS08590 methyl-accepting chemotaxis protein 0.50 ABZR87_RS01255 LysR substrate-binding domain-containing protein low > 80
Ralstonia solanacearum GMI1000 0.30 RS_RS03375 chemotaxis protein 0.51 RS_RS13470 hydrogen peroxide-inducible genes activator low > 80
Ralstonia solanacearum PSI07 0.30 RPSI07_RS20665 chemotaxis protein 0.51 RPSI07_RS11690 hydrogen peroxide-inducible genes activator low > 81
Cupriavidus basilensis FW507-4G11 0.30 RR42_RS04260 chemotaxis protein 0.48 RR42_RS17385 LysR family transcriptional regulator low > 128
Acidovorax sp. GW101-3H11 0.28 Ac3H11_3986 twitching motility protein PilJ 0.47 Ac3H11_784 Hydrogen peroxide-inducible genes activator low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.27 GFF645 twitching motility protein PilJ 0.44 GFF2803 Hydrogen peroxide-inducible genes activator low > 90
Variovorax sp. SCN45 0.27 GFF2154 twitching motility protein PilJ 0.47 GFF5549 Hydrogen peroxide-inducible genes activator => OxyR low > 127
Variovorax sp. OAS795 0.26 ABID97_RS24690 methyl-accepting chemotaxis protein 0.46 ABID97_RS01570 LysR substrate-binding domain-containing protein low > 91
Herbaspirillum seropedicae SmR1 0.22 HSERO_RS19170 chemotaxis protein 0.52 HSERO_RS18935 LysR family transcriptional regulator low > 78

Not shown: 0 genomes with orthologs for PP_4989 only; 60 genomes with orthologs for PP_5309 only