Conservation of cofitness between PP_4541 and PP_4986 in Pseudomonas putida KT2440

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4541 peptidyl-prolyl cis-trans isomerase A (rotamase A) 1.0 PP_4986 Channel protein, hemolysin III family 0.15 7
Pseudomonas fluorescens FW300-N2E2 0.76 Pf6N2E2_2684 Peptidyl-prolyl cis-trans isomerase PpiA precursor (EC 5.2.1.8) 0.83 Pf6N2E2_4629 COG1272: Predicted membrane protein hemolysin III homolog low > 103
Pseudomonas fluorescens GW456-L13 0.76 PfGW456L13_4460 Peptidyl-prolyl cis-trans isomerase PpiA precursor (EC 5.2.1.8) 0.81 PfGW456L13_1038 COG1272: Predicted membrane protein hemolysin III homolog low > 87
Pseudomonas fluorescens FW300-N2C3 0.75 AO356_04245 peptidylprolyl isomerase 0.83 AO356_13560 hemolysin III low > 104
Pseudomonas sp. RS175 0.75 PFR28_00746 Peptidyl-prolyl cis-trans isomerase A 0.83 PFR28_04213 hypothetical protein low > 88
Pseudomonas simiae WCS417 0.74 PS417_20535 peptidylprolyl isomerase 0.81 PS417_26570 hemolysin III low > 88
Pseudomonas fluorescens FW300-N2E3 0.73 AO353_18270 peptidylprolyl isomerase 0.85 AO353_08075 hemolysin III low > 101
Pseudomonas fluorescens FW300-N1B4 0.73 Pf1N1B4_550 Peptidyl-prolyl cis-trans isomerase PpiA precursor (EC 5.2.1.8) 0.80 Pf1N1B4_2371 COG1272: Predicted membrane protein hemolysin III homolog low > 87
Pseudomonas fluorescens SBW25 0.72 PFLU_RS22230 peptidylprolyl isomerase A 0.80 PFLU_RS28225 hemolysin III family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.72 PFLU_RS22230 peptidylprolyl isomerase A 0.80 PFLU_RS28225 hemolysin III family protein low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.72 Psyr_3826 Peptidyl-prolyl cis-trans isomerase, cyclophilin type 0.80 Psyr_0452 HylII low > 86
Pseudomonas syringae pv. syringae B728a 0.72 Psyr_3826 Peptidyl-prolyl cis-trans isomerase, cyclophilin type 0.80 Psyr_0452 HylII low > 86
Klebsiella michiganensis M5al 0.59 BWI76_RS26020 peptidylprolyl isomerase A 0.37 BWI76_RS23840 hemolysin III family protein low > 92
Escherichia coli BL21 0.58 ECD_03214 peptidyl-prolyl cis-trans isomerase A (rotamase A) 0.37 ECD_02731 hemolysin III family HylIII inner membrane protein low > 60
Escherichia coli ECOR38 0.58 HEPCGN_16035 ppiA peptidylprolyl isomerase A 0.37 HEPCGN_18835 yqfA hemolysin III family protein low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.58 OHPLBJKB_00339 Peptidyl-prolyl cis-trans isomerase A 0.37 OHPLBJKB_00816 hypothetical protein low > 73
Escherichia fergusonii Becca 0.58 EFB2_00459 Peptidyl-prolyl cis-trans isomerase A 0.37 EFB2_01002 hypothetical protein low > 86
Escherichia coli ECRC98 0.58 JDDGAC_20835 ppiA peptidylprolyl isomerase A 0.37 JDDGAC_23185 yqfA hemolysin III family protein
Escherichia coli ECRC62 0.58 BNILDI_02515 ppiA peptidylprolyl isomerase A 0.37 BNILDI_10000 yqfA hemolysin III family protein
Escherichia coli ECRC101 0.58 MCAODC_07735 ppiA peptidylprolyl isomerase A 0.37 MCAODC_10065 yqfA hemolysin III family protein
Escherichia coli ECRC99 0.58 KEDOAH_10935 ppiA peptidylprolyl isomerase A 0.37 KEDOAH_08595 yqfA hemolysin III family protein
Escherichia coli ECRC101 0.58 OKFHMN_17205 ppiA peptidylprolyl isomerase A 0.37 OKFHMN_19545 yqfA hemolysin III family protein
Escherichia coli Nissle 1917 0.58 ECOLIN_RS19260 peptidylprolyl isomerase A 0.37 ECOLIN_RS16150 hemolysin III family protein low > 52
Escherichia coli BW25113 0.58 b3363 ppiA peptidyl-prolyl cis-trans isomerase A (rotamase A) (NCBI) 0.37 b2899 yqfA predicted oxidoreductase, inner membrane subunit (NCBI) low > 76
Escherichia coli ECOR27 0.58 NOLOHH_09005 ppiA peptidylprolyl isomerase A 0.37 NOLOHH_11465 yqfA hemolysin III family protein low > 57
Pectobacterium carotovorum WPP14 0.58 HER17_RS01880 peptidylprolyl isomerase A 0.34 HER17_RS17935 hemolysin III family protein low > 75
Escherichia coli ECRC102 0.58 NIAGMN_14975 ppiA peptidylprolyl isomerase A 0.37 NIAGMN_17310 yqfA hemolysin III family protein
Serratia liquefaciens MT49 0.57 IAI46_23625 peptidylprolyl isomerase A 0.39 IAI46_20775 hemolysin III family protein low > 86
Enterobacter asburiae PDN3 0.57 EX28DRAFT_4165 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 0.37 EX28DRAFT_2950 channel protein, hemolysin III family low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.57 GFF3706 Peptidyl-prolyl cis-trans isomerase PpiA precursor (EC 5.2.1.8) 0.36 GFF2997 COG1272: Predicted membrane protein hemolysin III homolog low > 78
Pantoea sp. MT58 0.57 IAI47_01935 peptidylprolyl isomerase A 0.37 IAI47_03795 hemolysin III family protein low > 76
Dickeya dianthicola 67-19 0.57 HGI48_RS19640 peptidylprolyl isomerase A 0.34 HGI48_RS03410 hemolysin III family protein low > 71
Dickeya dianthicola ME23 0.57 DZA65_RS20725 peptidylprolyl isomerase A 0.34 DZA65_RS03455 hemolysin III family protein low > 75
Pseudomonas stutzeri RCH2 0.56 Psest_1623 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 0.82 Psest_3779 channel protein, hemolysin III family low > 67
Dickeya dadantii 3937 0.56 DDA3937_RS19510 peptidylprolyl isomerase A 0.35 DDA3937_RS03270 hemolysin III family protein low > 74
Pseudomonas sp. S08-1 0.56 OH686_05460 Peptidyl-prolyl cis-trans isomerase PpiA precursor 0.82 OH686_06045 Predicted membrane protein, hemolysin III-related low > 80
Enterobacter sp. TBS_079 0.56 MPMX20_04266 Peptidyl-prolyl cis-trans isomerase A 0.37 MPMX20_03758 hypothetical protein low > 85
Rahnella sp. WP5 0.54 EX31_RS04660 peptidylprolyl isomerase A 0.39 EX31_RS21610 hemolysin III family protein low > 89
Acinetobacter radioresistens SK82 0.53 MPMX26_03041 Peptidyl-prolyl cis-trans isomerase A 0.32 MPMX26_00606 hypothetical protein low > 36
Marinobacter adhaerens HP15 0.52 HP15_1541 peptidyl-prolyl cis-trans isomerase, cyclophilin type 0.42 HP15_2974 channel protein, hemolysin III family low > 73
Paraburkholderia bryophila 376MFSha3.1 0.49 H281DRAFT_00544 peptidyl-prolyl cis-trans isomerase A (cyclophilin A) 0.61 H281DRAFT_04221 hemolysin III low > 103
Paraburkholderia graminis OAS925 0.48 ABIE53_002709 peptidyl-prolyl cis-trans isomerase A (cyclophilin A) 0.62 ABIE53_003461 hemolysin III low > 113
Paraburkholderia sabiae LMG 24235 0.48 QEN71_RS06120 peptidylprolyl isomerase 0.60 QEN71_RS02270 hemolysin III family protein low > 153
Burkholderia phytofirmans PsJN 0.48 BPHYT_RS12440 peptidyl-prolyl cis-trans isomerase 0.63 BPHYT_RS16440 hemolysin D low > 109
Vibrio cholerae E7946 ATCC 55056 0.47 CSW01_11695 peptidyl-prolyl cis-trans isomerase 0.36 CSW01_00205 hemolysin III family protein low > 62
Cupriavidus basilensis FW507-4G11 0.46 RR42_RS06340 peptidyl-prolyl cis-trans isomerase 0.57 RR42_RS36990 hemolysin III low > 128
Rhodanobacter sp. FW510-T8 0.40 OKGIIK_03770 Peptidyl-prolyl cis-trans isomerase 0.40 OKGIIK_00475 yqfA putative membrane channel-forming protein YqfA, hemolysin III family low > 52
Azospirillum brasilense Sp245 0.25 AZOBR_RS22165 peptidylprolyl isomerase 0.25 AZOBR_RS18955 DNA-binding protein low > 97
Azospirillum sp. SherDot2 0.25 MPMX19_01182 hypothetical protein 0.20 MPMX19_02364 hypothetical protein low > 112
Pedobacter sp. GW460-11-11-14-LB5 0.20 CA265_RS21440 peptidylprolyl isomerase 0.28 CA265_RS22915 hypothetical protein low > 88

Not shown: 6 genomes with orthologs for PP_4541 only; 33 genomes with orthologs for PP_4986 only