Conservation of cofitness between PP_4162 and PP_4723 in Pseudomonas putida KT2440

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4162 conserved membrane protein of unknown function 1.0 PP_4723 Carbamoyl-phosphate synthase large chain 0.28 10
Pseudomonas fluorescens SBW25-INTG 0.81 PFLU_RS09095 AI-2E family transporter 0.93 PFLU_RS25880 carbamoyl-phosphate synthase large subunit — —
Pseudomonas fluorescens SBW25 0.81 PFLU_RS09095 AI-2E family transporter 0.93 PFLU_RS25880 carbamoyl-phosphate synthase large subunit — —
Pseudomonas fluorescens FW300-N2C3 0.81 AO356_19830 hypothetical protein 0.93 AO356_07480 carbamoyl phosphate synthase large subunit low > 104
Pseudomonas fluorescens FW300-N2E2 0.81 Pf6N2E2_5882 Putative membrane protein 0.93 Pf6N2E2_3364 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) — —
Pseudomonas sp. RS175 0.80 PFR28_03068 Putative transport protein YdiK 0.93 PFR28_00077 Carbamoyl-phosphate synthase large chain — —
Pseudomonas fluorescens GW456-L13 0.80 PfGW456L13_2055 Putative membrane protein 0.93 PfGW456L13_5099 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) — —
Pseudomonas simiae WCS417 0.79 PS417_09040 hypothetical protein 0.93 PS417_24040 carbamoyl phosphate synthase large subunit — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.79 Psyr_2029 Protein of unknown function UPF0118 0.93 Psyr_4191 carbamoyl-phosphate synthase large subunit — —
Pseudomonas syringae pv. syringae B728a 0.79 Psyr_2029 Protein of unknown function UPF0118 0.93 Psyr_4191 carbamoyl-phosphate synthase large subunit — —
Pseudomonas fluorescens FW300-N2E3 0.78 AO353_01690 hypothetical protein 0.94 AO353_05630 carbamoyl phosphate synthase large subunit — —
Pseudomonas fluorescens FW300-N1B4 0.77 Pf1N1B4_3528 Putative membrane protein 0.93 Pf1N1B4_1172 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) — —
Pseudomonas sp. S08-1 0.68 OH686_01920 Uncharacterized UPF0118 membrane protein 0.89 OH686_17080 Carbamoyl-phosphate synthase large chain — —
Pseudomonas stutzeri RCH2 0.65 Psest_2464 Predicted permease 0.89 Psest_0968 carbamoyl-phosphate synthase, large subunit — —
Cupriavidus basilensis FW507-4G11 0.43 RR42_RS03900 membrane protein 0.68 RR42_RS13510 carbamoyl phosphate synthase large subunit — —
Paraburkholderia graminis OAS925 0.40 ABIE53_001629 putative PurR-regulated permease PerM 0.67 ABIE53_003004 carbamoyl-phosphate synthase large subunit — —
Burkholderia phytofirmans PsJN 0.40 BPHYT_RS06810 membrane protein 0.68 BPHYT_RS14190 carbamoyl phosphate synthase large subunit low > 109
Paraburkholderia bryophila 376MFSha3.1 0.38 H281DRAFT_04605 Predicted PurR-regulated permease PerM 0.67 H281DRAFT_04403 carbamoyl-phosphate synthase large subunit — —
Dechlorosoma suillum PS 0.38 Dsui_0423 putative permease 0.71 Dsui_3064 carbamoyl-phosphate synthase, large subunit — —
Paraburkholderia sabiae LMG 24235 0.37 QEN71_RS23970 AI-2E family transporter 0.68 QEN71_RS04780 carbamoyl-phosphate synthase large subunit — —
Sinorhizobium meliloti 1021 0.33 SMa0447 hypothetical protein 0.59 SMc01215 carbamoyl phosphate synthase large subunit low > 103
Rahnella sp. WP5 0.30 EX31_RS13930 AI-2E family transporter YdiK 0.75 EX31_RS03830 carbamoyl-phosphate synthase large subunit low > 89
Pectobacterium carotovorum WPP14 0.29 HER17_RS08900 AI-2E family transporter YdiK 0.75 HER17_RS02900 carbamoyl-phosphate synthase large subunit low > 75
Serratia liquefaciens MT49 0.29 IAI46_11125 AI-2E family transporter YdiK 0.75 IAI46_03195 carbamoyl-phosphate synthase large subunit low > 86
Escherichia coli ECRC99 0.29 KEDOAH_00885 ydiK AI-2E family transporter YdiK 0.75 KEDOAH_17215 carB carbamoyl-phosphate synthase large subunit — —
Escherichia coli BW25113 0.29 b1688 ydiK predicted inner membrane protein (NCBI) 0.75 b0033 carB carbamoyl-phosphate synthase large subunit (NCBI) low > 76
Escherichia fergusonii Becca 0.29 EFB2_02304 Putative transport protein YdiK 0.75 EFB2_04012 Carbamoyl-phosphate synthase large chain low > 86
Escherichia coli ECRC101 0.29 MCAODC_18185 ydiK AI-2E family transporter YdiK 0.75 MCAODC_01455 carB carbamoyl-phosphate synthase large subunit — —
Escherichia coli ECRC101 0.29 OKFHMN_27225 ydiK AI-2E family transporter YdiK 0.75 OKFHMN_10940 carB carbamoyl-phosphate synthase large subunit — —
Escherichia coli ECRC98 0.29 JDDGAC_01800 ydiK AI-2E family transporter YdiK 0.75 JDDGAC_14535 carB carbamoyl-phosphate synthase large subunit — —
Escherichia coli ECRC62 0.29 BNILDI_16535 ydiK AI-2E family transporter YdiK 0.75 BNILDI_08330 carB carbamoyl-phosphate synthase large subunit — —
Escherichia coli ECRC102 0.29 NIAGMN_00840 ydiK AI-2E family transporter YdiK 0.75 NIAGMN_08790 carB carbamoyl-phosphate synthase large subunit — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.29 OHPLBJKB_02036 Putative transport protein YdiK 0.75 OHPLBJKB_03624 Carbamoyl-phosphate synthase large chain low > 73
Escherichia coli ECOR38 0.29 HEPCGN_05610 ydiK AI-2E family transporter YdiK 0.75 HEPCGN_08925 carB carbamoyl-phosphate synthase large subunit low > 85
Escherichia coli ECOR27 0.29 NOLOHH_17745 ydiK AI-2E family transporter YdiK 0.75 NOLOHH_03270 carB carbamoyl-phosphate synthase large subunit — —
Klebsiella michiganensis M5al 0.29 BWI76_RS17055 hypothetical protein 0.75 BWI76_RS04470 carbamoyl phosphate synthase large subunit low > 92
Escherichia coli BL21 0.29 ECD_01657 UPF0118 family inner membrane protein 0.75 ECD_00037 carbamoyl-phosphate synthase large subunit low > 60
Escherichia coli Nissle 1917 0.29 ECOLIN_RS09435 AI-2E family transporter YdiK 0.75 ECOLIN_RS00180 carbamoyl-phosphate synthase large subunit — —
Dickeya dadantii 3937 0.28 DDA3937_RS12800 AI-2E family transporter YdiK 0.74 DDA3937_RS18305 carbamoyl-phosphate synthase large subunit low > 74
Enterobacter asburiae PDN3 0.28 EX28DRAFT_1697 Predicted permease 0.75 EX28DRAFT_3638 carbamoyl-phosphate synthase, large subunit — —
Enterobacter sp. TBS_079 0.28 MPMX20_01925 Putative transport protein YdiK 0.75 MPMX20_00740 Carbamoyl-phosphate synthase large chain low > 85
Dickeya dianthicola ME23 0.28 DZA65_RS13330 AI-2E family transporter YdiK 0.74 DZA65_RS19380 carbamoyl-phosphate synthase large subunit low > 75
Dickeya dianthicola 67-19 0.28 HGI48_RS12865 AI-2E family transporter YdiK 0.74 HGI48_RS18240 carbamoyl-phosphate synthase large subunit low > 71
Acinetobacter radioresistens SK82 0.28 MPMX26_02768 Putative transport protein YdiK 0.77 MPMX26_00766 Carbamoyl-phosphate synthase large chain low > 36
Erwinia tracheiphila SCR3 0.27 LU632_RS11035 ydiK AI-2E family transporter YdiK 0.74 LU632_RS02750 carB carbamoyl-phosphate synthase large subunit low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.27 GFF3553 Putative membrane protein 0.75 GFF213 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) low > 78
Pantoea sp. MT58 0.26 IAI47_10895 AI-2E family transporter YdiK 0.75 IAI47_16115 carbamoyl-phosphate synthase large subunit low > 76
Shewanella oneidensis MR-1 0.19 SO0472 membrane protein, putative (NCBI ptt file) 0.77 SO1142 carB carbamoyl-phosphate synthase, large subunit (NCBI ptt file) low > 76
Hydrogenophaga sp. GW460-11-11-14-LB1 0.19 GFF3026 putative membrane protein 0.68 GFF4898 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) — —
Agrobacterium fabrum C58 0.19 Atu1739 permease 0.58 Atu2178 carbamoylphosphate synthase large subunit — —
Desulfovibrio vulgaris Hildenborough JW710 0.11 DVU0128 membrane protein, putative (TIGR) 0.59 DVU0162 carB carbamoyl-phosphate synthase, large subunit (TIGR) — —

Not shown: 0 genomes with orthologs for PP_4162 only; 53 genomes with orthologs for PP_4723 only