Conservation of cofitness between PP_4475 and PP_4478 in Pseudomonas putida KT2440

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4475 succinylglutamate desuccinylase 1.0 PP_4478 N-succinylglutamate 5-semialdehyde dehydrogenase 0.57 1
Pseudomonas fluorescens FW300-N2E3 0.79 AO353_02995 succinylglutamate desuccinylase 0.82 AO353_03010 succinylglutamate-semialdehyde dehydrogenase 0.80 1
Pseudomonas sp. RS175 0.78 PFR28_03277 Succinylglutamate desuccinylase 0.81 PFR28_03280 N-succinylglutamate 5-semialdehyde dehydrogenase 0.86 1
Pseudomonas fluorescens FW300-N2E2 0.78 Pf6N2E2_5671 Succinylglutamate desuccinylase (EC 3.5.1.96) 0.81 Pf6N2E2_5668 Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) 0.30 37
Pseudomonas fluorescens SBW25 0.78 PFLU_RS23285 succinylglutamate desuccinylase 0.79 PFLU_RS23300 succinylglutamate-semialdehyde dehydrogenase low > 109
Pseudomonas fluorescens FW300-N2C3 0.78 AO356_18755 succinylglutamate desuccinylase 0.82 AO356_18740 succinylglutamate-semialdehyde dehydrogenase 0.49 5
Pseudomonas fluorescens SBW25-INTG 0.78 PFLU_RS23285 succinylglutamate desuccinylase 0.79 PFLU_RS23300 succinylglutamate-semialdehyde dehydrogenase 0.40 18
Pseudomonas simiae WCS417 0.77 PS417_21680 succinylglutamate desuccinylase 0.81 PS417_21695 succinylglutamate-semialdehyde dehydrogenase 0.31 4
Pseudomonas fluorescens GW456-L13 0.77 PfGW456L13_1977 Succinylglutamate desuccinylase (EC 3.5.1.96) (from data) 0.81 PfGW456L13_1974 Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) (from data) 0.56 2
Pseudomonas fluorescens FW300-N1B4 0.77 Pf1N1B4_3447 Succinylglutamate desuccinylase (EC 3.5.1.96) 0.82 Pf1N1B4_3444 Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) — —
Pseudomonas sp. S08-1 0.74 OH686_21320 succinylglutamate desuccinylase 0.78 OH686_21305 succinylglutamate-semialdehyde dehydrogenase — —
Pseudomonas syringae pv. syringae B728a 0.72 Psyr_3559 succinylglutamate desuccinylase 0.81 Psyr_3562 succinylglutamic semialdehyde dehydrogenase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.72 Psyr_3559 succinylglutamate desuccinylase 0.81 Psyr_3562 succinylglutamic semialdehyde dehydrogenase low > 86
Shewanella sp. ANA-3 0.35 Shewana3_2132 succinylglutamate desuccinylase (RefSeq) 0.65 Shewana3_0612 astD succinylglutamic semialdehyde dehydrogenase (RefSeq) 0.81 1
Shewanella oneidensis MR-1 0.35 SO2338 astE succinylglutamate desuccinylase (NCBI ptt file) 0.65 SO0619 astD Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) (from data) 0.67 1
Shewanella amazonensis SB2B 0.35 Sama_1708 succinylglutamate desuccinylase (RefSeq) 0.62 Sama_1626 astD succinylglutamic semialdehyde dehydrogenase (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.35 MIT1002_01538 Succinylglutamate desuccinylase 0.63 MIT1002_00435 N-succinylglutamate 5-semialdehyde dehydrogenase — —
Paraburkholderia bryophila 376MFSha3.1 0.34 H281DRAFT_06483 succinylglutamate desuccinylase 0.59 H281DRAFT_06481 succinylglutamic semialdehyde dehydrogenase — —
Acinetobacter radioresistens SK82 0.34 MPMX26_02247 Succinylglutamate desuccinylase 0.61 MPMX26_02249 N-succinylglutamate 5-semialdehyde dehydrogenase 0.85 1
Paraburkholderia graminis OAS925 0.33 ABIE53_001774 succinylglutamate desuccinylase 0.59 ABIE53_001772 succinylglutamic semialdehyde dehydrogenase 0.24 76
Burkholderia phytofirmans PsJN 0.33 BPHYT_RS07720 Succinylglutamate desuccinylase (EC 3.5.1.96) (from data) 0.61 BPHYT_RS07710 succinylglutamate-semialdehyde dehydrogenase — —
Paraburkholderia sabiae LMG 24235 0.33 QEN71_RS23350 succinylglutamate desuccinylase 0.58 QEN71_RS23360 succinylglutamate-semialdehyde dehydrogenase — —
Enterobacter asburiae PDN3 0.32 EX28DRAFT_1748 succinylglutamate desuccinylase (EC 3.5.1.96) 0.60 EX28DRAFT_1750 succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) — —
Shewanella loihica PV-4 0.32 Shew_1924 succinylglutamate desuccinylase (RefSeq) 0.62 Shew_0580 succinylglutamic semialdehyde dehydrogenase (RefSeq) — —
Kangiella aquimarina DSM 16071 0.32 B158DRAFT_1551 succinylglutamate desuccinylase (EC 3.5.1.96) 0.56 B158DRAFT_2219 succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) — —
Escherichia coli ECRC101 0.31 MCAODC_18485 astE succinylglutamate desuccinylase 0.59 MCAODC_18495 astD succinylglutamate-semialdehyde dehydrogenase — —
Escherichia coli ECRC99 0.31 KEDOAH_01185 astE succinylglutamate desuccinylase 0.59 KEDOAH_01195 astD succinylglutamate-semialdehyde dehydrogenase — —
Escherichia coli ECRC101 0.31 OKFHMN_26925 astE succinylglutamate desuccinylase 0.59 OKFHMN_26915 astD succinylglutamate-semialdehyde dehydrogenase — —
Escherichia coli ECRC98 0.31 JDDGAC_01500 astE succinylglutamate desuccinylase 0.59 JDDGAC_01490 astD succinylglutamate-semialdehyde dehydrogenase — —
Escherichia coli ECRC102 0.31 NIAGMN_01140 astE succinylglutamate desuccinylase 0.59 NIAGMN_01150 astD succinylglutamate-semialdehyde dehydrogenase — —
Enterobacter sp. TBS_079 0.31 MPMX20_01869 Succinylglutamate desuccinylase 0.60 MPMX20_01867 N-succinylglutamate 5-semialdehyde dehydrogenase 0.77 2
Escherichia coli HS(pFamp)R (ATCC 700891) 0.31 OHPLBJKB_01988 Succinylglutamate desuccinylase 0.60 OHPLBJKB_01986 N-succinylglutamate 5-semialdehyde dehydrogenase low > 73
Escherichia coli ECOR27 0.31 NOLOHH_17440 astE succinylglutamate desuccinylase 0.60 NOLOHH_17430 astD succinylglutamate-semialdehyde dehydrogenase — —
Escherichia coli BL21 0.31 ECD_01713 succinylglutamate desuccinylase 0.60 ECD_01715 succinylglutamic semialdehyde dehydrogenase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.31 GFF3496 Succinylglutamate desuccinylase (EC 3.5.1.96) 0.60 GFF3494 Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) 0.43 15
Escherichia coli BW25113 0.31 b1744 astE succinylglutamate desuccinylase (NCBI) 0.60 b1746 astD succinylglutamic semialdehyde dehydrogenase (NCBI) 0.25 3
Escherichia fergusonii Becca 0.31 EFB2_02249 Succinylglutamate desuccinylase 0.59 EFB2_02247 N-succinylglutamate 5-semialdehyde dehydrogenase low > 86
Escherichia coli ECRC62 0.31 BNILDI_16225 astE succinylglutamate desuccinylase 0.60 BNILDI_16215 astD succinylglutamate-semialdehyde dehydrogenase — —
Marinobacter adhaerens HP15 0.31 HP15_3034 succinylglutamate desuccinylase 0.61 HP15_3039 N-succinylglutamate 5-semialdehyde dehydrogenase 0.43 1
Serratia liquefaciens MT49 0.31 IAI46_15315 succinylglutamate desuccinylase 0.57 IAI46_15325 succinylglutamate-semialdehyde dehydrogenase low > 86
Escherichia coli Nissle 1917 0.31 ECOLIN_RS09725 succinylglutamate desuccinylase 0.59 ECOLIN_RS09735 succinylglutamate-semialdehyde dehydrogenase — —
Escherichia coli ECOR38 0.31 HEPCGN_05290 astE succinylglutamate desuccinylase 0.59 HEPCGN_05280 astD succinylglutamate-semialdehyde dehydrogenase low > 85
Rahnella sp. WP5 0.29 EX31_RS17390 succinylglutamate desuccinylase 0.61 EX31_RS17400 succinylglutamate-semialdehyde dehydrogenase low > 89
Klebsiella michiganensis M5al 0.29 BWI76_RS11690 succinylglutamate desuccinylase 0.57 BWI76_RS11680 succinylglutamate-semialdehyde dehydrogenase 0.63 1
Pantoea sp. MT58 0.28 IAI47_11075 succinylglutamate desuccinylase 0.58 IAI47_11085 succinylglutamate-semialdehyde dehydrogenase 0.88 2
Vibrio cholerae E7946 ATCC 55056 0.24 CSW01_06280 succinylglutamate desuccinylase 0.58 CSW01_13240 N-succinylglutamate 5-semialdehyde dehydrogenase low > 62

Not shown: 1 genomes with orthologs for PP_4475 only; 4 genomes with orthologs for PP_4478 only