Conservation of cofitness between PP_0586 and PP_4122 in Pseudomonas putida KT2440

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_0586 cadmium translocating P-type ATPase 1.0 PP_4122 proton-pumping NADH:ubiquinone oxidoreductase, respiratory complex I, subunit E 0.20 18
Pseudomonas fluorescens GW456-L13 0.79 PfGW456L13_24 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) 0.97 PfGW456L13_2630 NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)
Pseudomonas fluorescens FW300-N2E3 0.79 AO353_06155 copper-transporting ATPase 0.97 AO353_27755 NADH dehydrogenase
Pseudomonas fluorescens FW300-N2E2 0.79 Pf6N2E2_3487 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) 0.96 Pf6N2E2_274 NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)
Pseudomonas fluorescens FW300-N2C3 0.79 AO356_08065 copper-transporting ATPase 0.96 AO356_22055 NADH dehydrogenase
Pseudomonas sp. RS175 0.78 PFR28_05244 Copper-exporting P-type ATPase 0.96 PFR28_02630 NADH-quinone oxidoreductase subunit E
Pseudomonas fluorescens FW300-N1B4 0.77 Pf1N1B4_1262 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) 0.96 Pf1N1B4_4038 NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) low > 87
Pseudomonas simiae WCS417 0.72 PS417_03160 metal ABC transporter ATPase 0.95 PS417_16590 NADH dehydrogenase
Pseudomonas fluorescens SBW25-INTG 0.72 PFLU_RS03240 copper-translocating P-type ATPase 0.95 PFLU_RS18630 NADH-quinone oxidoreductase subunit NuoE
Pseudomonas fluorescens SBW25 0.72 PFLU_RS03240 copper-translocating P-type ATPase 0.95 PFLU_RS18630 NADH-quinone oxidoreductase subunit NuoE low > 109
Pseudomonas sp. S08-1 0.68 OH686_07395 copper-translocating P-type ATPase 0.80 OH686_00140 NADH-ubiquinone oxidoreductase chain E low > 80
Pseudomonas syringae pv. syringae B728a ΔmexB 0.68 Psyr_0654 Copper-translocating P-type ATPase:Heavy metal translocating P-type ATPase 0.93 Psyr_3200 NADH dehydrogenase subunit E
Pseudomonas syringae pv. syringae B728a 0.68 Psyr_0654 Copper-translocating P-type ATPase:Heavy metal translocating P-type ATPase 0.93 Psyr_3200 NADH dehydrogenase subunit E
Acidovorax sp. GW101-3H11 0.55 Ac3H11_4218 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) 0.27 Ac3H11_1448 NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)
Lysobacter sp. OAE881 0.53 ABIE51_RS09555 heavy metal translocating P-type ATPase 0.25 ABIE51_RS08330 NADH-quinone oxidoreductase subunit NuoE
Herbaspirillum seropedicae SmR1 0.49 HSERO_RS08020 heavy metal translocating P-type ATPase 0.30 HSERO_RS08840 NADH dehydrogenase
Dechlorosoma suillum PS 0.49 Dsui_1065 copper/silver-translocating P-type ATPase 0.29 Dsui_3046 NADH-quinone oxidoreductase, E subunit
Rhodanobacter denitrificans MT42 0.49 LRK55_RS18700 heavy metal translocating P-type ATPase 0.23 LRK55_RS00885 NADH-quinone oxidoreductase subunit NuoE
Acinetobacter radioresistens SK82 0.38 MPMX26_01948 Copper-transporting P-type ATPase 0.55 MPMX26_02552 NADH-quinone oxidoreductase subunit E
Serratia liquefaciens MT49 0.37 IAI46_13395 copper-translocating P-type ATPase 0.71 IAI46_17695 NADH-quinone oxidoreductase subunit NuoE
Pontibacter actiniarum KMM 6156, DSM 19842 0.35 CA264_21425 copper-translocating P-type ATPase 0.46 CA264_04255 NADH-quinone oxidoreductase subunit E low > 74
Sinorhizobium meliloti 1021 0.35 SM_b21578 copper-transporting P-type ATPase 0.33 SMa1526 NuoE2 NADH I chain E low > 103
Klebsiella michiganensis M5al 0.34 BWI76_RS06905 Cu+ exporting ATPase 0.71 BWI76_RS20175 NADH-quinone oxidoreductase subunit E
Enterobacter asburiae PDN3 0.33 EX28DRAFT_2474 copper-(or silver)-translocating P-type ATPase 0.72 EX28DRAFT_0324 NADH-quinone oxidoreductase, E subunit low > 76
Enterobacter sp. TBS_079 0.33 MPMX20_01084 Copper-exporting P-type ATPase 0.72 MPMX20_03215 NADH-quinone oxidoreductase subunit E low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.33 GFF4404 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) 0.71 GFF1888 NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) low > 78
Escherichia coli ECOR38 0.32 HEPCGN_06710 copA copper-exporting P-type ATPase CopA 0.72 HEPCGN_22060 nuoE NADH-quinone oxidoreductase subunit NuoE low > 87
Escherichia coli ECRC100 0.32 OKFHMN_08075 copA copper-exporting P-type ATPase CopA 0.73 OKFHMN_22855 nuoE NADH-quinone oxidoreductase subunit NuoE low > 80
Escherichia coli ECRC98 0.32 JDDGAC_11720 copA copper-exporting P-type ATPase CopA 0.73 JDDGAC_26820 nuoE NADH-quinone oxidoreductase subunit NuoE low > 86
Escherichia coli BL21 0.32 ECD_00435 copper transporter 0.72 ECD_02210 NADH:ubiquinone oxidoreductase, chain E low > 61
Escherichia coli ECRC101 0.32 MCAODC_27295 copA copper-exporting P-type ATPase CopA 0.73 MCAODC_13895 nuoE NADH-quinone oxidoreductase subunit NuoE low > 87
Escherichia coli ECRC102 0.32 NIAGMN_06125 copA copper-exporting P-type ATPase CopA 0.73 NIAGMN_20625 nuoE NADH-quinone oxidoreductase subunit NuoE
Escherichia fergusonii Becca 0.32 EFB2_03575 Copper-exporting P-type ATPase 0.72 EFB2_01574 NADH-quinone oxidoreductase subunit E low > 86
Escherichia coli BW25113 0.32 b0484 copA copper transporter (NCBI) 0.72 b2285 nuoE NADH dehydrogenase subunit E (NCBI) low > 76
Escherichia coli ECRC99 0.32 KEDOAH_19895 copA copper-exporting P-type ATPase CopA 0.73 KEDOAH_05340 nuoE NADH-quinone oxidoreductase subunit NuoE
Escherichia coli ECOR27 0.32 NOLOHH_01015 copA copper-exporting P-type ATPase CopA 0.72 NOLOHH_14475 nuoE NADH-quinone oxidoreductase subunit NuoE low > 75
Pantoea sp. MT58 0.32 IAI47_14400 copper-exporting P-type ATPase CopA 0.69 IAI47_06375 NADH-quinone oxidoreductase subunit NuoE
Escherichia coli Nissle 1917 0.32 ECOLIN_RS02865 copper-exporting P-type ATPase CopA 0.72 ECOLIN_RS13270 NADH-quinone oxidoreductase subunit NuoE
Castellaniella sp019104865 MT123 0.32 ABCV34_RS04200 heavy metal translocating P-type ATPase 0.27 ABCV34_RS08730 NADH-quinone oxidoreductase subunit NuoE
Escherichia coli ECRC62 0.32 BNILDI_22435 copA copper-exporting P-type ATPase CopA 0.72 BNILDI_13395 nuoE NADH-quinone oxidoreductase subunit NuoE low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.32 OHPLBJKB_03190 Copper-exporting P-type ATPase 0.72 OHPLBJKB_01421 NADH-quinone oxidoreductase subunit E
Erwinia tracheiphila SCR3 0.32 LU632_RS15300 copA copper-exporting P-type ATPase CopA 0.68 LU632_RS07980 nuoE NADH-quinone oxidoreductase subunit NuoE low > 74
Rahnella sp. WP5 0.31 EX31_RS22575 copper-exporting P-type ATPase CopA 0.68 EX31_RS19420 NADH-quinone oxidoreductase subunit NuoE low > 89
Pectobacterium carotovorum WPP14 0.30 HER17_RS15625 copper-exporting P-type ATPase CopA 0.72 HER17_RS07140 NADH-quinone oxidoreductase subunit NuoE
Shewanella oneidensis MR-1 0.30 SO1689 cation transport ATPase, E1-E2 family (NCBI ptt file) 0.73 SO1018 nuoE NADH dehydrogenase I, E subunit (NCBI ptt file) low > 76
Dickeya dianthicola ME23 0.30 DZA65_RS06225 copper-exporting P-type ATPase CopA 0.69 DZA65_RS14970 NADH-quinone oxidoreductase subunit NuoE
Rhodanobacter denitrificans FW104-10B01 0.29 LRK54_RS01945 heavy metal translocating P-type ATPase 0.23 LRK54_RS01110 NADH-quinone oxidoreductase subunit NuoE

Not shown: 43 genomes with orthologs for PP_0586 only; 6 genomes with orthologs for PP_4122 only