Conservation of cofitness between PP_5028 and PP_2336 in Pseudomonas putida KT2440

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_5028 proline iminopeptidase 1.0 PP_2336 aconitate hydratase 1 0.37 14
Pseudomonas sp. RS175 0.83 PFR28_04976 Proline iminopeptidase 0.90 PFR28_02925 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) low > 88
Pseudomonas fluorescens FW300-N2E3 0.83 AO353_12300 proline iminopeptidase 0.90 AO353_00890 Fe/S-dependent 2-methylisocitrate dehydratase AcnD low > 101
Pseudomonas fluorescens FW300-N2E2 0.82 Pf6N2E2_3794 Proline iminopeptidase (EC 3.4.11.5) 0.91 Pf6N2E2_6063 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79) low > 103
Pseudomonas fluorescens FW300-N2C3 0.82 AO356_09575 proline iminopeptidase 0.90 AO356_20875 Fe/S-dependent 2-methylisocitrate dehydratase AcnD low > 104
Pseudomonas fluorescens GW456-L13 0.82 PfGW456L13_313 Proline iminopeptidase (EC 3.4.11.5) 0.90 PfGW456L13_4116 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79) low > 87
Pseudomonas fluorescens FW300-N1B4 0.81 Pf1N1B4_1575 Proline iminopeptidase (EC 3.4.11.5) 0.90 Pf1N1B4_3821 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79) low > 87
Pseudomonas sp. S08-1 0.79 OH686_10205 prolyl aminopeptidase 0.81 OH686_01680 2-methylisocitrate dehydratase, Fe/S-dependent low > 80
Pseudomonas syringae pv. syringae B728a ΔmexB 0.79 Psyr_0375 prolyl aminopeptidase, Serine peptidase, MEROPS family S33 0.88 Psyr_2087 aconitase / 2-methylcitrate dehydratase (trans-methylaconitate-forming) low > 86
Pseudomonas syringae pv. syringae B728a 0.79 Psyr_0375 prolyl aminopeptidase, Serine peptidase, MEROPS family S33 0.88 Psyr_2087 aconitase / 2-methylcitrate dehydratase (trans-methylaconitate-forming) low > 86
Pseudomonas simiae WCS417 0.79 PS417_01780 proline iminopeptidase 0.89 PS417_21070 aconitate hydratase low > 88
Pseudomonas fluorescens SBW25 0.78 PFLU_RS01825 prolyl aminopeptidase 0.88 PFLU_RS22680 Fe/S-dependent 2-methylisocitrate dehydratase AcnD low > 109
Pseudomonas fluorescens SBW25-INTG 0.78 PFLU_RS01825 prolyl aminopeptidase 0.88 PFLU_RS22680 Fe/S-dependent 2-methylisocitrate dehydratase AcnD low > 109
Pseudomonas stutzeri RCH2 0.76 Psest_3951 proline iminopeptidase, Neisseria-type subfamily 0.80 Psest_2319 aconitate hydratase 1/2-methylisocitrate dehydratase, Fe/S-dependent — —
Marinobacter adhaerens HP15 0.58 HP15_430 peptidase S33, proline iminopeptidase 1 0.82 HP15_1930 aconitate hydratase 1 — —
Xanthomonas campestris pv. campestris strain 8004 0.52 Xcc-8004.4219.1 Proline iminopeptidase (EC 3.4.11.5) 0.84 Xcc-8004.3979.1 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79) 0.55 10
Lysobacter sp. OAE881 0.51 ABIE51_RS05500 prolyl aminopeptidase 0.82 ABIE51_RS09495 Fe/S-dependent 2-methylisocitrate dehydratase AcnD — —
Dyella japonica UNC79MFTsu3.2 0.51 ABZR86_RS09625 prolyl aminopeptidase 0.84 ABZR86_RS08435 Fe/S-dependent 2-methylisocitrate dehydratase AcnD low > 74
Ralstonia solanacearum PSI07 0.47 RPSI07_RS00655 prolyl aminopeptidase 0.85 RPSI07_RS00390 Fe/S-dependent 2-methylisocitrate dehydratase AcnD low > 81
Variovorax sp. SCN45 0.47 GFF2633 Proline iminopeptidase (EC 3.4.11.5) 0.86 GFF270 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) (EC 4.2.1.117) low > 127
Herbaspirillum seropedicae SmR1 0.47 HSERO_RS15995 proline iminopeptidase 0.87 HSERO_RS11425 aconitate hydratase — —
Cupriavidus basilensis FW507-4G11 0.47 RR42_RS16705 proline iminopeptidase 0.84 RR42_RS11270 aconitate hydratase low > 128
Ralstonia solanacearum IBSBF1503 0.47 RALBFv3_RS22505 prolyl aminopeptidase 0.84 RALBFv3_RS22830 Fe/S-dependent 2-methylisocitrate dehydratase AcnD low > 76
Ralstonia solanacearum UW163 0.47 UW163_RS23050 prolyl aminopeptidase 0.84 UW163_RS23450 Fe/S-dependent 2-methylisocitrate dehydratase AcnD — —
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS16395 prolyl aminopeptidase 0.85 ABZR87_RS16735 Fe/S-dependent 2-methylisocitrate dehydratase AcnD low > 80
Ralstonia solanacearum GMI1000 0.46 RS_RS18090 prolyl aminopeptidase 0.86 RS_RS17730 Fe/S-dependent 2-methylisocitrate dehydratase AcnD low > 80
Alteromonas macleodii MIT1002 0.39 MIT1002_03674 Proline iminopeptidase 0.82 MIT1002_03131 Aconitate hydratase 1 — —
Paraburkholderia bryophila 376MFSha3.1 0.21 H281DRAFT_01329 prolyl aminopeptidase (EC:3.4.11.5). Serine peptidase. MEROPS family S33 0.83 H281DRAFT_02981 aconitase /2-methylcitrate dehydratase (trans-methylaconitate-forming) low > 103
Shewanella oneidensis MR-1 0.21 SO4400 proline iminopeptidase, putative (NCBI ptt file) 0.84 SO0343 acnA aconitate hydratase 1 (NCBI ptt file) low > 76
Paraburkholderia graminis OAS925 0.21 ABIE53_005484 proline iminopeptidase 0.83 ABIE53_005043 iron-sulfur-dependent 2-methylisocitrate dehydratase — —
Paraburkholderia sabiae LMG 24235 0.19 QEN71_RS30235 alpha/beta fold hydrolase 0.85 QEN71_RS31060 Fe/S-dependent 2-methylisocitrate dehydratase AcnD low > 153
Shewanella loihica PV-4 0.19 Shew_3544 alpha/beta hydrolase fold (RefSeq) 0.82 Shew_1822 aconitate hydratase (RefSeq) low > 60

Not shown: 23 genomes with orthologs for PP_5028 only; 16 genomes with orthologs for PP_2336 only