Conservation of cofitness between PP_3539 and PP_2215 in Pseudomonas putida KT2440

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_3539 putative Transcriptional regulator 1.0 PP_2215 acetyl-CoA acetyltransferase 0.19 4
Pseudomonas fluorescens GW456-L13 0.86 PfGW456L13_2595 Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family 0.85 PfGW456L13_2982 3-ketoacyl-CoA thiolase (EC 2.3.1.16) (from data) low > 87
Pseudomonas sp. RS175 0.85 PFR28_01263 HTH-type transcriptional regulator CueR 0.84 PFR28_01882 Acetyl-CoA acetyltransferase low > 88
Pseudomonas fluorescens FW300-N1B4 0.85 Pf1N1B4_3991 Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family 0.84 Pf1N1B4_4786 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
Pseudomonas fluorescens FW300-N2E2 0.85 Pf6N2E2_2188 Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family 0.83 Pf6N2E2_1145 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
Pseudomonas fluorescens FW300-N2C3 0.84 AO356_01565 MerR family transcriptional regulator 0.83 AO356_26350 acetyl-CoA acetyltransferase low > 104
Pseudomonas fluorescens FW300-N2E3 0.84 AO353_20370 MerR family transcriptional regulator 0.85 AO353_25685 acetyl-CoA:acetyl-CoA C-acetyltransferase / acetyl-CoA:propanoyl-CoA 2-C-acetyltransferase (EC 2.3.1.9; EC 2.3.1.16) (from data) low > 101
Pseudomonas simiae WCS417 0.82 PS417_17000 MerR family transcriptional regulator 0.84 PS417_13855 acetyl-CoA acetyltransferase low > 88
Pseudomonas fluorescens SBW25 0.82 PFLU_RS18950 MerR family DNA-binding transcriptional regulator 0.84 PFLU_RS14765 acetyl-CoA C-acyltransferase low > 109
Pseudomonas fluorescens SBW25-INTG 0.82 PFLU_RS18950 MerR family DNA-binding transcriptional regulator 0.84 PFLU_RS14765 acetyl-CoA C-acyltransferase low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.77 Psyr_2472 transcriptional regulator, MerR family 0.74 Psyr_3031 Thiolase low > 86
Pseudomonas syringae pv. syringae B728a 0.77 Psyr_2472 transcriptional regulator, MerR family 0.74 Psyr_3031 Thiolase low > 86
Pseudomonas sp. S08-1 0.76 OH686_00860 Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family 0.74 OH686_00870 3-ketoacyl-CoA thiolase or Acetyl-CoA acetyltransferase low > 80
Pseudomonas stutzeri RCH2 0.76 Psest_1075 Predicted transcriptional regulators 0.76 Psest_2446 acetyl-CoA acetyltransferases low > 67
Marinobacter adhaerens HP15 0.57 HP15_1006 transcriptional regulator, MerR family 0.58 HP15_1009 acyl-CoA thiolase low > 73
Shewanella amazonensis SB2B 0.56 Sama_1363 MerR family transcriptional regulator (RefSeq) 0.59 Sama_1375 Acetyl-CoA C-acetyltransferase (RefSeq) low > 62
Shewanella sp. ANA-3 0.56 Shewana3_1673 MerR family transcriptional regulator (RefSeq) 0.57 Shewana3_2771 acetyl-CoA acetyltransferases (RefSeq) low > 73
Shewanella oneidensis MR-1 0.56 SO1898 transcriptional regulator, putative (NCBI ptt file) 0.57 SO1677 atoB 3-ketoacyl-CoA thiolase [isoleucine degradation] (EC 2.3.1.16) (from data) low > 76
Shewanella loihica PV-4 0.54 Shew_2569 MerR family transcriptional regulator (RefSeq) 0.59 Shew_1667 acetyl-CoA acetyltransferase (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.49 MIT1002_01670 Zn(II)-responsive regulator of zntA 0.58 MIT1002_01671 Acetyl-CoA acetyltransferase 0.51 2
Rhodospirillum rubrum S1H 0.45 Rru_A1994 Transcriptional Regulator, MerR family (NCBI) 0.62 Rru_A1946 Acetyl-CoA C-acetyltransferase (NCBI) low > 58
Kangiella aquimarina DSM 16071 0.44 B158DRAFT_2513 Predicted transcriptional regulators 0.61 B158DRAFT_2511 acetyl-CoA acetyltransferases 0.71 2
Sinorhizobium meliloti 1021 0.42 SMc01260 transcriptional regulator 0.67 SMa1450 thiolase low > 103
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS00860 MerR family transcriptional regulator 0.65 RR42_RS25380 acetyl-CoA acetyltransferase low > 128
Rhizobium sp. OAE497 0.41 ABIE40_RS09800 MerR family DNA-binding transcriptional regulator 0.66 ABIE40_RS23180 acetyl-CoA C-acyltransferase low > 107
Agrobacterium fabrum C58 0.41 Atu1546 transcriptional regulator, MerR family 0.63 Atu3475 acetyl-CoA C-acetyltransferase low > 89
Acidovorax sp. GW101-3H11 0.40 Ac3H11_2989 Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family 0.63 Ac3H11_2994 3-ketoacyl-CoA thiolase (EC 2.3.1.16) (from data) low > 79
Azospirillum sp. SherDot2 0.39 MPMX19_01355 hypothetical protein 0.66 MPMX19_03936 Acetyl-CoA acetyltransferase low > 112
Azospirillum brasilense Sp245 0.39 AZOBR_RS10195 MerR family transcriptional regulator 0.59 AZOBR_RS28180 acetyl-CoA acetyltransferase low > 97
Castellaniella sp019104865 MT123 0.38 ABCV34_RS12375 MerR family DNA-binding transcriptional regulator 0.59 ABCV34_RS12360 acetyl-CoA C-acyltransferase 0.94 10
Herbaspirillum seropedicae SmR1 0.38 HSERO_RS23435 MerR family transcriptional regulator 0.60 HSERO_RS04635 acetyl-CoA acetyltransferase low > 78
Dinoroseobacter shibae DFL-12 0.32 Dshi_0840 transcriptional regulator, MerR family (RefSeq) 0.57 Dshi_0074 acetyl-CoA acetyltransferase (RefSeq) low > 64

Not shown: 0 genomes with orthologs for PP_3539 only; 31 genomes with orthologs for PP_2215 only