Conservation of cofitness between PP_4989 and PP_1994 in Pseudomonas putida KT2440

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4989 Protein PilJ 1.0 PP_1994 tRNA pseudouridine (38-40)synthase 0.25 17
Pseudomonas fluorescens FW300-N2C3 0.79 AO356_13495 chemotaxis protein 0.76 AO356_21435 pseudouridine synthase low > 104
Pseudomonas fluorescens FW300-N2E2 0.79 Pf6N2E2_4616 type IV pilus biogenesis protein PilJ 0.78 Pf6N2E2_70 tRNA pseudouridine synthase A (EC 4.2.1.70) low > 103
Pseudomonas fluorescens FW300-N2E3 0.78 AO353_08090 chemotaxis protein 0.77 AO353_20660 pseudouridine synthase low > 101
Pseudomonas fluorescens GW456-L13 0.78 PfGW456L13_1025 type IV pilus biogenesis protein PilJ 0.79 PfGW456L13_3941 tRNA pseudouridine synthase A (EC 4.2.1.70) low > 87
Pseudomonas fluorescens SBW25-INTG 0.78 PFLU_RS28300 chemotaxis protein 0.76 PFLU_RS20545 tRNA pseudouridine(38-40) synthase TruA low > 109
Pseudomonas fluorescens SBW25 0.78 PFLU_RS28300 chemotaxis protein 0.76 PFLU_RS20545 tRNA pseudouridine(38-40) synthase TruA low > 109
Pseudomonas simiae WCS417 0.78 PS417_26655 chemotaxis protein 0.76 PS417_18565 pseudouridine synthase — —
Pseudomonas fluorescens FW300-N1B4 0.78 Pf1N1B4_2357 type IV pilus biogenesis protein PilJ 0.78 Pf1N1B4_7 tRNA pseudouridine synthase A (EC 4.2.1.70) low > 87
Pseudomonas sp. RS175 0.77 PFR28_04228 hypothetical protein 0.78 PFR28_02817 tRNA pseudouridine synthase A low > 88
Pseudomonas syringae pv. syringae B728a 0.75 Psyr_0491 chemotaxis sensory transducer 0.78 Psyr_1662 tRNA pseudouridine synthase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.75 Psyr_0491 chemotaxis sensory transducer 0.78 Psyr_1662 tRNA pseudouridine synthase low > 86
Pseudomonas sp. S08-1 0.72 OH686_10895 type IV pilus biogenesis protein PilJ 0.71 OH686_04450 tRNA pseudouridine(38-40) synthase low > 80
Pseudomonas stutzeri RCH2 0.68 Psest_0300 Methyl-accepting chemotaxis protein 0.70 Psest_2585 pseudouridylate synthase I low > 67
Marinobacter adhaerens HP15 0.55 HP15_3516 methyl-accepting chemotaxis sensory transducer 0.50 HP15_1829 tRNA pseudouridine synthase A low > 73
Kangiella aquimarina DSM 16071 0.44 B158DRAFT_0185 Methyl-accepting chemotaxis protein 0.50 B158DRAFT_1483 pseudouridylate synthase I low > 40
Acinetobacter radioresistens SK82 0.40 MPMX26_02510 hypothetical protein 0.50 MPMX26_00352 tRNA pseudouridine synthase A low > 36
Rhodanobacter sp. FW510-T8 0.40 OKGIIK_11055 chemotaxis protein 0.39 OKGIIK_04830 truA tRNA pseudouridine(38-40) synthase TruA — —
Rhodanobacter denitrificans MT42 0.40 LRK55_RS03950 methyl-accepting chemotaxis protein 0.40 LRK55_RS01480 tRNA pseudouridine(38-40) synthase TruA low > 63
Rhodanobacter denitrificans FW104-10B01 0.40 LRK54_RS04180 methyl-accepting chemotaxis protein 0.40 LRK54_RS01700 tRNA pseudouridine(38-40) synthase TruA 0.39 4
Dyella japonica UNC79MFTsu3.2 0.39 ABZR86_RS10350 methyl-accepting chemotaxis protein 0.39 ABZR86_RS08015 tRNA pseudouridine(38-40) synthase TruA low > 74
Xanthomonas campestris pv. campestris strain 8004 0.37 Xcc-8004.1505.1 pilus biogenesis protein 0.40 Xcc-8004.1961.1 tRNA pseudouridine synthase A (EC 4.2.1.70) low > 74
Lysobacter sp. OAE881 0.37 ABIE51_RS05230 methyl-accepting chemotaxis protein 0.41 ABIE51_RS08245 tRNA pseudouridine(38-40) synthase TruA low > 62
Dechlorosoma suillum PS 0.35 Dsui_0657 methyl-accepting chemotaxis protein 0.46 Dsui_3194 pseudouridylate synthase I low > 51
Ralstonia solanacearum UW163 0.31 UW163_RS00975 chemotaxis protein 0.41 UW163_RS11130 tRNA pseudouridine(38-40) synthase TruA — —
Ralstonia solanacearum IBSBF1503 0.31 RALBFv3_RS12590 chemotaxis protein 0.41 RALBFv3_RS02595 tRNA pseudouridine(38-40) synthase TruA — —
Ralstonia sp. UNC404CL21Col 0.31 ABZR87_RS08590 methyl-accepting chemotaxis protein 0.41 ABZR87_RS14510 tRNA pseudouridine(38-40) synthase TruA low > 80
Ralstonia solanacearum GMI1000 0.30 RS_RS03375 chemotaxis protein 0.42 RS_RS09975 tRNA pseudouridine(38-40) synthase TruA low > 80
Ralstonia solanacearum PSI07 0.30 RPSI07_RS20665 chemotaxis protein 0.42 RPSI07_RS14720 tRNA pseudouridine(38-40) synthase TruA low > 81
Cupriavidus basilensis FW507-4G11 0.30 RR42_RS04260 chemotaxis protein 0.38 RR42_RS14370 tRNA pseudouridine synthase A — —
Acidovorax sp. GW101-3H11 0.28 Ac3H11_3986 twitching motility protein PilJ 0.42 Ac3H11_1532 tRNA pseudouridine synthase A (EC 4.2.1.70) low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.27 GFF645 twitching motility protein PilJ 0.42 GFF3357 tRNA pseudouridine synthase A (EC 4.2.1.70) low > 90
Variovorax sp. SCN45 0.27 GFF2154 twitching motility protein PilJ 0.40 GFF3885 tRNA pseudouridine(38-40) synthase (EC 5.4.99.12) low > 127
Variovorax sp. OAS795 0.26 ABID97_RS24690 methyl-accepting chemotaxis protein 0.39 ABID97_RS08440 tRNA pseudouridine(38-40) synthase TruA low > 91
Herbaspirillum seropedicae SmR1 0.22 HSERO_RS19170 chemotaxis protein 0.43 HSERO_RS16485 tRNA pseudouridine synthase A low > 78

Not shown: 0 genomes with orthologs for PP_4989 only; 66 genomes with orthologs for PP_1994 only