Conservation of cofitness between PP_4281 and PP_1324 in Pseudomonas putida KT2440

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4281 guanine deaminase 1.0 PP_1324 putative endonuclease distantly related to archaeal Holliday junction resolvase 0.24 17
Pseudomonas fluorescens FW300-N1B4 0.86 Pf1N1B4_3850 Guanine deaminase (EC 3.5.4.3) 0.59 Pf1N1B4_955 Predicted endonuclease distantly related to archaeal Holliday junction resolvase — —
Pseudomonas fluorescens GW456-L13 0.86 PfGW456L13_4087 Guanine deaminase (EC 3.5.4.3) 0.55 PfGW456L13_1641 Predicted endonuclease distantly related to archaeal Holliday junction resolvase low > 87
Pseudomonas simiae WCS417 0.84 PS417_20900 guanine deaminase 0.61 PS417_04580 hypothetical protein low > 88
Pseudomonas fluorescens SBW25-INTG 0.84 PFLU_RS22515 guanine deaminase 0.62 PFLU_RS04645 YraN family protein low > 109
Pseudomonas fluorescens SBW25 0.84 PFLU_RS22515 guanine deaminase 0.62 PFLU_RS04645 YraN family protein low > 109
Pseudomonas fluorescens FW300-N2C3 0.84 AO356_02575 guanine deaminase 0.57 AO356_17100 hypothetical protein low > 104
Pseudomonas sp. RS175 0.83 PFR28_01061 Guanine deaminase 0.54 PFR28_03599 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2E2 0.83 Pf6N2E2_2339 Guanine deaminase (EC 3.5.4.3) 0.55 Pf6N2E2_5344 Predicted endonuclease distantly related to archaeal Holliday junction resolvase low > 103
Pseudomonas syringae pv. syringae B728a ΔmexB 0.80 Psyr_1812 guanine deaminase 0.59 Psyr_4114 Protein of unknown function UPF0102 low > 86
Pseudomonas syringae pv. syringae B728a 0.80 Psyr_1812 guanine deaminase 0.59 Psyr_4114 Protein of unknown function UPF0102 low > 86
Pseudomonas stutzeri RCH2 0.75 Psest_1208 guanine deaminase 0.56 Psest_3272 TIGR00252 family protein low > 67
Acinetobacter radioresistens SK82 0.58 MPMX26_03062 Guanine deaminase 0.32 MPMX26_02280 hypothetical protein — —
Dickeya dianthicola 67-19 0.58 HGI48_RS12240 guanine deaminase 0.32 HGI48_RS01600 YraN family protein low > 71
Dickeya dadantii 3937 0.57 DDA3937_RS12145 guanine deaminase 0.34 DDA3937_RS01705 YraN family protein low > 74
Escherichia coli BL21 0.57 ECD_02716 guanine deaminase 0.35 ECD_03015 UPF0102 family protein low > 61
Escherichia coli ECRC99 0.57 KEDOAH_08510 guaD guanine deaminase 0.35 KEDOAH_09925 yraN YraN family protein — —
Escherichia coli ECRC98 0.57 JDDGAC_23270 guaD guanine deaminase 0.35 JDDGAC_21850 yraN YraN family protein low > 86
Escherichia coli ECRC101 0.57 MCAODC_10150 guaD guanine deaminase 0.35 MCAODC_08745 yraN YraN family protein low > 87
Escherichia coli ECRC100 0.57 OKFHMN_19625 guaD guanine deaminase 0.35 OKFHMN_18225 yraN YraN family protein low > 80
Escherichia coli ECRC102 0.57 NIAGMN_17395 guaD guanine deaminase 0.35 NIAGMN_15985 yraN YraN family protein — —
Escherichia coli ECOR27 0.57 NOLOHH_11555 guaD guanine deaminase 0.35 NOLOHH_10025 yraN YraN family protein low > 75
Escherichia coli ECRC62 0.57 BNILDI_10080 guaD guanine deaminase 0.35 BNILDI_01505 yraN YraN family protein low > 75
Escherichia coli ECOR38 0.57 HEPCGN_18915 guaD guanine deaminase 0.35 HEPCGN_17100 yraN YraN family protein low > 87
Escherichia coli BW25113 0.57 b2883 guaD guanine deaminase (NCBI) 0.35 b3148 yraN hypothetical protein (NCBI) low > 76
Escherichia coli Nissle 1917 0.56 ECOLIN_RS16065 guanine deaminase 0.35 ECOLIN_RS18095 YraN family protein low > 55
Escherichia fergusonii Becca 0.56 EFB2_01018 Guanine deaminase 0.35 EFB2_00675 hypothetical protein low > 86
Lysobacter sp. OAE881 0.55 ABIE51_RS09675 guanine deaminase 0.36 ABIE51_RS04685 YraN family protein low > 62
Klebsiella michiganensis M5al 0.55 BWI76_RS10520 guanine deaminase 0.38 BWI76_RS24920 YraN family protein low > 92
Serratia liquefaciens MT49 0.53 IAI46_11780 guanine deaminase 0.37 IAI46_22305 YraN family protein low > 86
Pantoea sp. MT58 0.53 IAI47_09810 guanine deaminase 0.30 IAI47_02840 YraN family protein low > 76
Enterobacter sp. TBS_079 0.53 MPMX20_01658 Guanine deaminase 0.37 MPMX20_04052 hypothetical protein low > 85
Enterobacter asburiae PDN3 0.53 EX28DRAFT_1948 guanine deaminase (EC 3.5.4.3) 0.36 EX28DRAFT_3197 TIGR00252 family protein low > 76
Herbaspirillum seropedicae SmR1 0.51 HSERO_RS16335 guanine deaminase 0.45 HSERO_RS23355 hypothetical protein — —
Rahnella sp. WP5 0.51 EX31_RS07035 guanine deaminase 0.38 EX31_RS12540 YraN family protein low > 89
Rhizobium sp. OAE497 0.51 ABIE40_RS25220 guanine deaminase 0.20 ABIE40_RS01375 YraN family protein low > 107
Burkholderia phytofirmans PsJN 0.51 BPHYT_RS15100 guanine deaminase 0.35 BPHYT_RS01945 hypothetical protein low > 109
Ralstonia solanacearum PSI07 0.48 RPSI07_RS14150 guanine deaminase 0.39 RPSI07_RS08735 YraN family protein low > 81
Cupriavidus basilensis FW507-4G11 0.48 RR42_RS05320 guanine deaminase 0.39 RR42_RS19735 hypothetical protein low > 128
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS15060 guanine deaminase 0.39 ABZR87_RS03810 YraN family protein low > 80
Ralstonia solanacearum GMI1000 0.47 RS_RS10530 guanine deaminase 0.38 RS_RS16355 YraN family protein low > 80
Ralstonia solanacearum IBSBF1503 0.46 RALBFv3_RS03160 guanine deaminase 0.39 RALBFv3_RS08490 YraN family protein low > 76
Ralstonia solanacearum UW163 0.46 UW163_RS10565 guanine deaminase 0.39 UW163_RS05120 YraN family protein — —
Alteromonas macleodii MIT1002 0.45 MIT1002_01570 Guanine deaminase 0.31 MIT1002_03115 hypothetical protein low > 70
Acidovorax sp. GW101-3H11 0.44 Ac3H11_1117 Guanine deaminase (EC 3.5.4.3) 0.33 Ac3H11_4467 Predicted endonuclease distantly related to archaeal Holliday junction resolvase low > 79
Phaeobacter inhibens DSM 17395 0.43 PGA1_c21840 guanine deaminase GuaD 0.23 PGA1_c26720 Predicted endonuclease distantly related to archaeal Holliday junction resolvase low > 62
Hydrogenophaga sp. GW460-11-11-14-LB1 0.41 GFF213 Guanine deaminase (EC 3.5.4.3) 0.32 GFF2716 Predicted endonuclease distantly related to archaeal Holliday junction resolvase — —
Variovorax sp. OAS795 0.40 ABID97_RS22045 guanine deaminase 0.33 ABID97_RS00280 YraN family protein 0.42 3
Variovorax sp. SCN45 0.40 GFF1914 Guanine deaminase (EC 3.5.4.3) 0.33 GFF3736 UPF0102 protein YraN low > 127

Not shown: 15 genomes with orthologs for PP_4281 only; 26 genomes with orthologs for PP_1324 only