Conservation of cofitness between PP_0395 and PP_1319 in Pseudomonas putida KT2440

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_0395 putative type IV piliation protein 1.0 PP_1319 Ubiquinol--cytochrome c reductase, cytochrome c1 0.56 6
Pseudomonas fluorescens FW300-N2C3 0.92 AO356_14305 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) 0.90 AO356_17075 cytochrome C low > 104
Pseudomonas sp. RS175 0.92 PFR28_04070 hypothetical protein 0.90 PFR28_03604 Ammonia monooxygenase gamma subunit
Pseudomonas fluorescens FW300-N2E2 0.90 Pf6N2E2_4799 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) 0.89 Pf6N2E2_5339 ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit low > 103
Pseudomonas fluorescens GW456-L13 0.89 PfGW456L13_1194 FIG004684: SpoVR-like protein 0.90 PfGW456L13_1636 ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit low > 87
Pseudomonas fluorescens FW300-N2E3 0.89 AO353_07345 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) 0.87 AO353_15255 cytochrome C
Pseudomonas fluorescens FW300-N1B4 0.89 Pf1N1B4_2521 FIG004684: SpoVR-like protein 0.88 Pf1N1B4_960 ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit low > 87
Pseudomonas simiae WCS417 0.88 PS417_25840 SpoVR family protein 0.85 PS417_04165 cytochrome C
Pseudomonas fluorescens SBW25 0.88 PFLU_RS27495 SpoVR family protein 0.85 PFLU_RS04205 cytochrome c1 low > 109
Pseudomonas fluorescens SBW25-INTG 0.88 PFLU_RS27495 SpoVR family protein 0.85 PFLU_RS04205 cytochrome c1 0.55 5
Pseudomonas sp. S08-1 0.87 OH686_15010 SpoVR-like protein 0.89 OH686_08380 Ubiquinol-cytochrome C reductase, cytochrome C1 subunit
Pseudomonas stutzeri RCH2 0.86 Psest_3674 Uncharacterized conserved protein 0.79 Psest_3277 Cytochrome c1
Marinobacter adhaerens HP15 0.74 HP15_2935 SpoVR family protein 0.51 HP15_547 ubiquinol-cytochrome c reductase, cytochrome c1
Shewanella amazonensis SB2B 0.69 Sama_1923 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) 0.48 Sama_3019 ubiquinol-cytochrome c reductase cytochrome c1 subunit (RefSeq) low > 62
Vibrio cholerae E7946 ATCC 55056 0.68 CSW01_09390 SpoVR family protein 0.47 CSW01_03055 cytochrome c1 low > 62
Alteromonas macleodii MIT1002 0.67 MIT1002_01231 SpoVR family protein 0.48 MIT1002_00816 Cytochrome c1 precursor low > 70
Shewanella sp. ANA-3 0.67 Shewana3_1636 SpoVR family protein (RefSeq) 0.48 Shewana3_0603 cytochrome c1 (RefSeq) low > 73
Variovorax sp. SCN45 0.67 GFF2935 FIG004684: SpoVR-like protein 0.31 GFF6696 Ubiquinol-cytochrome C reductase, cytochrome C1 subunit low > 127
Shewanella oneidensis MR-1 0.67 SO2884 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) 0.48 SO0610 petC ubiquinol-cytochrome c reductase, cytochrome c1 (NCBI ptt file) low > 76
Cupriavidus basilensis FW507-4G11 0.67 RR42_RS36475 SpoVR family protein 0.37 RR42_RS18815 cytochrome C low > 128
Shewanella loihica PV-4 0.67 Shew_1831 hypothetical protein (RefSeq) 0.45 Shew_0572 cytochrome c1 (RefSeq)
Herbaspirillum seropedicae SmR1 0.66 HSERO_RS21700 SpoVR family protein 0.37 HSERO_RS20235 cytochrome C low > 78
Paraburkholderia graminis OAS925 0.66 ABIE53_002316 stage V sporulation protein R 0.37 ABIE53_003683 ubiquinol-cytochrome c reductase cytochrome c1 subunit low > 113
Paraburkholderia bryophila 376MFSha3.1 0.66 H281DRAFT_05234 Stage V sporulation protein SpoVR/YcgB, involved in spore cortex formation 0.37 H281DRAFT_05671 ubiquinol-cytochrome c reductase cytochrome c1 subunit
Burkholderia phytofirmans PsJN 0.66 BPHYT_RS11180 SpoVR family protein 0.36 BPHYT_RS17620 cytochrome C low > 109
Paraburkholderia sabiae LMG 24235 0.65 QEN71_RS07385 SpoVR family protein 0.35 QEN71_RS27775 cytochrome c1
Ralstonia sp. UNC404CL21Col 0.64 ABZR87_RS14210 SpoVR family protein 0.39 ABZR87_RS02375 cytochrome c1 low > 80
Acidovorax sp. GW101-3H11 0.63 Ac3H11_1147 FIG004684: SpoVR-like protein 0.32 Ac3H11_4752 ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit
Azospirillum sp. SherDot2 0.48 MPMX19_02155 hypothetical protein 0.13 MPMX19_05014 Cytochrome c1 low > 112
Castellaniella sp019104865 MT123 0.12 ABCV34_RS05550 SpoVR family protein 0.33 ABCV34_RS12625 cytochrome c1

Not shown: 33 genomes with orthologs for PP_0395 only; 14 genomes with orthologs for PP_1319 only