Conservation of cofitness between PP_3539 and PP_1088 in Pseudomonas putida KT2440

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_3539 putative Transcriptional regulator 1.0 PP_1088 Argininosuccinate synthase 0.14 10
Pseudomonas fluorescens GW456-L13 0.86 PfGW456L13_2595 Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family 0.96 PfGW456L13_1749 Argininosuccinate synthase (EC 6.3.4.5) low > 87
Pseudomonas sp. RS175 0.85 PFR28_01263 HTH-type transcriptional regulator CueR 0.96 PFR28_03353 Argininosuccinate synthase
Pseudomonas fluorescens FW300-N2E2 0.85 Pf6N2E2_2188 Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family 0.95 Pf6N2E2_5590 Argininosuccinate synthase (EC 6.3.4.5)
Pseudomonas fluorescens FW300-N1B4 0.85 Pf1N1B4_3991 Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family 0.96 Pf1N1B4_742 Argininosuccinate synthase (EC 6.3.4.5) low > 87
Pseudomonas fluorescens FW300-N2C3 0.84 AO356_01565 MerR family transcriptional regulator 0.95 AO356_18325 argininosuccinate synthase low > 104
Pseudomonas fluorescens FW300-N2E3 0.84 AO353_20370 MerR family transcriptional regulator 0.95 AO353_04105 argininosuccinate synthase low > 101
Pseudomonas simiae WCS417 0.82 PS417_17000 MerR family transcriptional regulator 0.96 PS417_05640 argininosuccinate synthase
Pseudomonas fluorescens SBW25 0.82 PFLU_RS18950 MerR family DNA-binding transcriptional regulator 0.96 PFLU_RS05725 argininosuccinate synthase
Pseudomonas fluorescens SBW25-INTG 0.82 PFLU_RS18950 MerR family DNA-binding transcriptional regulator 0.96 PFLU_RS05725 argininosuccinate synthase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.77 Psyr_2472 transcriptional regulator, MerR family 0.95 Psyr_3892 argininosuccinate synthase
Pseudomonas syringae pv. syringae B728a 0.77 Psyr_2472 transcriptional regulator, MerR family 0.95 Psyr_3892 argininosuccinate synthase
Pseudomonas sp. S08-1 0.76 OH686_00860 Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family 0.95 OH686_03930 argininosuccinate synthase low > 80
Pseudomonas stutzeri RCH2 0.76 Psest_1075 Predicted transcriptional regulators 0.95 Psest_3121 argininosuccinate synthase
Marinobacter adhaerens HP15 0.57 HP15_1006 transcriptional regulator, MerR family 0.82 HP15_2367 argininosuccinate synthase
Shewanella oneidensis MR-1 0.56 SO1898 transcriptional regulator, putative (NCBI ptt file) 0.46 SO0278 argG argininosuccinate synthase (NCBI ptt file) 0.69 55
Shewanella amazonensis SB2B 0.56 Sama_1363 MerR family transcriptional regulator (RefSeq) 0.46 Sama_0259 argininosuccinate synthase (RefSeq) 0.53 26
Shewanella sp. ANA-3 0.56 Shewana3_1673 MerR family transcriptional regulator (RefSeq) 0.46 Shewana3_3902 argininosuccinate synthase (RefSeq) low > 73
Shewanella loihica PV-4 0.54 Shew_2569 MerR family transcriptional regulator (RefSeq) 0.48 Shew_0205 argininosuccinate synthase (RefSeq) 0.85 17
Alteromonas macleodii MIT1002 0.49 MIT1002_01670 Zn(II)-responsive regulator of zntA 0.48 MIT1002_00468 Argininosuccinate synthase low > 70
Rhodospirillum rubrum S1H 0.45 Rru_A1994 Transcriptional Regulator, MerR family (NCBI) 0.72 Rru_A3751 Argininosuccinate synthase (NCBI) low > 58
Kangiella aquimarina DSM 16071 0.44 B158DRAFT_2513 Predicted transcriptional regulators 0.21 B158DRAFT_1976 argininosuccinate synthase (EC 6.3.4.5) low > 40
Sinorhizobium meliloti 1021 0.42 SMc01260 transcriptional regulator 0.68 SMc03826 argininosuccinate synthase 0.20 37
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS00860 MerR family transcriptional regulator 0.77 RR42_RS17170 argininosuccinate synthase
Rhizobium sp. OAE497 0.41 ABIE40_RS09800 MerR family DNA-binding transcriptional regulator 0.68 ABIE40_RS18150 argininosuccinate synthase
Agrobacterium fabrum C58 0.41 Atu1546 transcriptional regulator, MerR family 0.68 Atu2667 argininosuccinate synthase
Acidovorax sp. GW101-3H11 0.40 Ac3H11_2989 Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family 0.14 Ac3H11_2616 Argininosuccinate synthase (EC 6.3.4.5)
Azospirillum sp. SherDot2 0.39 MPMX19_01355 hypothetical protein 0.72 MPMX19_02369 Argininosuccinate synthase
Azospirillum brasilense Sp245 0.39 AZOBR_RS10195 MerR family transcriptional regulator 0.73 AZOBR_RS00785 argininosuccinate synthase
Castellaniella sp019104865 MT123 0.38 ABCV34_RS12375 MerR family DNA-binding transcriptional regulator 0.14 ABCV34_RS05390 argininosuccinate synthase
Herbaspirillum seropedicae SmR1 0.38 HSERO_RS23435 MerR family transcriptional regulator 0.14 HSERO_RS07180 argininosuccinate synthase
Dinoroseobacter shibae DFL-12 0.32 Dshi_0840 transcriptional regulator, MerR family (RefSeq) 0.69 Dshi_3472 Argininosuccinate synthase (RefSeq) low > 64

Not shown: 0 genomes with orthologs for PP_3539 only; 71 genomes with orthologs for PP_1088 only