| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas putida KT2440 | 1.0 | PP_1036 | | membrane-bound lytic murein transglycosylase F | 1.0 | PP_0789 | | N-acetyl-anhydromuramyl-L-alanine-amidase | 0.58 | 10 |
| Pseudomonas sp. BP01 | 0.95 | JOY50_RS11520 | mltF | membrane-bound lytic murein transglycosylase MltF | 0.91 | JOY50_RS19335 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 84 |
| Pseudomonas sp. SVBP6 | 0.90 | COO64_RS04690 | mltF | membrane-bound lytic murein transglycosylase MltF | 0.74 | COO64_RS03530 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | — | — |
| Pseudomonas simiae WCS417 | 0.87 | PS417_23025 | | murein transglycosylase | 0.66 | PS417_03935 | | N-acetyl-anhydromuranmyl-L-alanine amidase | low | > 88 |
| Pseudomonas fluorescens SBW25 | 0.87 | PFLU_RS24690 | | membrane-bound lytic murein transglycosylase MltF | 0.67 | PFLU_RS03980 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.87 | PFLU_RS24690 | | membrane-bound lytic murein transglycosylase MltF | 0.67 | PFLU_RS03980 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 109 |
| Pseudomonas fluorescens FW300-N1B4 | 0.84 | Pf1N1B4_888 | | Transglycosylase, Slt family | 0.68 | Pf1N1B4_1151 | | N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.83 | AO353_04490 | | murein transglycosylase | 0.70 | AO353_05510 | | N-acetyl-anhydromuranmyl-L-alanine amidase | low | > 101 |
| Pseudomonas fluorescens GW456-L13 | 0.83 | PfGW456L13_4836 | | Transglycosylase, Slt family | 0.68 | PfGW456L13_5081 | | N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.83 | Psyr_1268 | | extracellular solute-binding protein, family 3:SLT | 0.67 | Psyr_0817 | | N-acetylmuramoyl-L-alanine amidase, family 2 | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.83 | Psyr_1268 | | extracellular solute-binding protein, family 3:SLT | 0.67 | Psyr_0817 | | N-acetylmuramoyl-L-alanine amidase, family 2 | low | > 86 |
| Pseudomonas sp. DMC3 | 0.83 | GFF1961 | | Membrane-bound lytic murein transglycosylase F | 0.68 | GFF4998 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 89 |
| Pseudomonas sp. RS175 | 0.81 | PFR28_03519 | | Membrane-bound lytic murein transglycosylase F | 0.71 | PFR28_00100 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 88 |
| Pseudomonas fluorescens FW300-N2C3 | 0.81 | AO356_17515 | | murein transglycosylase | 0.70 | AO356_07360 | | N-acetyl-anhydromuranmyl-L-alanine amidase | low | > 104 |
| Pseudomonas lactucae CFBP13502 | 0.79 | GEMAOFIL_04758 | | Membrane-bound lytic murein transglycosylase F | 0.67 | GEMAOFIL_00991 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 96 |
| Pseudomonas fluorescens FW300-N2E2 | 0.77 | Pf6N2E2_5430 | | Transglycosylase, Slt family | 0.70 | Pf6N2E2_3344 | | N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD | low | > 103 |
| Pseudomonas aeruginosa PUPa3 | 0.76 | DQ20_RS42975 | mltF;go_component=membrane|0016020||IEA;go_function=lytic | membrane-bound lytic murein transglycosylase MltF | 0.72 | DQ20_RS56325 | ampD;go_function=N-acetylmuramoyl-L-alanine | 1 6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 101 |
| Pseudomonas aeruginosa PA14 | 0.76 | IKLFDK_19215 | | membrane-bound lytic murein transglycosylase MltF | 0.71 | IKLFDK_01470 | | beta-lactamase expression regulator AmpD | low | > 98 |
| Pseudomonas stutzeri RCH2 | 0.73 | Psest_1217 | | Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein | 0.65 | Psest_0725 | | Negative regulator of beta-lactamase expression | low | > 67 |
| Pseudomonas segetis P6 | 0.72 | ACVTMO_RS07700 | mltF | membrane-bound lytic murein transglycosylase MltF | 0.66 | ACVTMO_RS19325 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 75 |
| Pseudomonas sp. S08-1 | 0.70 | OH686_17625 | | Membrane-bound lytic murein transglycosylase F | 0.67 | OH686_16530 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase | low | > 80 |
| Kangiella aquimarina DSM 16071 | 0.39 | B158DRAFT_2243 | | Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein | 0.51 | B158DRAFT_2134 | | Negative regulator of beta-lactamase expression | 0.75 | 18 |
| Vibrio cholerae E7946 ATCC 55056 | 0.33 | CSW01_04460 | | lytic transglycosylase F | 0.49 | CSW01_12260 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 62 |
| Shewanella amazonensis SB2B | 0.33 | Sama_2351 | | Slt family transglycosylase (RefSeq) | 0.53 | Sama_0372 | | N-acetyl-anhydromuranmyl-L-alanine amidase (RefSeq) | low | > 62 |
| Serratia liquefaciens MT49 | 0.33 | IAI46_19480 | | membrane-bound lytic murein transglycosylase MltF | 0.46 | IAI46_03535 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 87 |
| Dickeya dadantii 3937 | 0.33 | DDA3937_RS15660 | | membrane-bound lytic murein transglycosylase MltF | 0.51 | DDA3937_RS17945 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 74 |
| Shewanella sp. ANA-3 | 0.33 | Shewana3_1239 | | lytic transglycosylase, catalytic (RefSeq) | 0.50 | Shewana3_0423 | | N-acetyl-anhydromuranmyl-L-alanine amidase (RefSeq) | low | > 73 |
| Dickeya dianthicola 67-19 | 0.33 | HGI48_RS15755 | | membrane-bound lytic murein transglycosylase MltF | 0.49 | HGI48_RS17875 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 71 |
| Shewanella oneidensis MR-1 | 0.33 | SO3288 | | transglycosylase, Slt family (NCBI ptt file) | 0.49 | SO0421 | ampD | AmpD protein (NCBI ptt file) | low | > 76 |
| Dickeya dianthicola ME23 | 0.32 | DZA65_RS16835 | | membrane-bound lytic murein transglycosylase MltF | 0.49 | DZA65_RS19020 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 75 |
| Pectobacterium carotovorum WPP14 | 0.32 | HER17_RS05905 | | membrane-bound lytic murein transglycosylase MltF | 0.53 | HER17_RS03260 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 75 |
| Klebsiella michiganensis M5al | 0.32 | BWI76_RS21275 | | lytic transglycosylase F | 0.51 | BWI76_RS04850 | | N-acetylmuramoyl-L-alanine amidase | low | > 92 |
| Shewanella loihica PV-4 | 0.32 | Shew_1300 | | lytic transglycosylase, catalytic (RefSeq) | 0.49 | Shew_3434 | | N-acetyl-anhydromuranmyl-L-alanine amidase (RefSeq) | 0.31 | 30 |
| Rahnella sp. WP5 | 0.31 | EX31_RS21890 | | membrane-bound lytic murein transglycosylase MltF | 0.48 | EX31_RS03510 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 89 |
| Methylophilus sp. DMC18 | 0.31 | GFF354 | | Membrane-bound lytic murein transglycosylase F | 0.45 | GFF2302 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | — | — |
| Enterobacter sp. TBS_079 | 0.31 | MPMX20_03427 | | Membrane-bound lytic murein transglycosylase F | 0.51 | MPMX20_00801 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 85 |
| Erwinia amylovora T8 | 0.31 | OLJFJH_10300 | | membrane-bound lytic murein transglycosylase MltF | 0.53 | OLJFJH_01045 | | 1 6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 58 |
| Dechlorosoma suillum PS | 0.31 | Dsui_1697 | | putative soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein | 0.46 | Dsui_0134 | | negative regulator of beta-lactamase expression | low | > 51 |
| Escherichia coli ECRC99 | 0.30 | KEDOAH_06755 | mltF | membrane-bound lytic murein transglycosylase MltF | 0.50 | KEDOAH_17630 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | — | — |
| Escherichia coli ECRC102 | 0.30 | NIAGMN_19235 | mltF | membrane-bound lytic murein transglycosylase MltF | 0.50 | NIAGMN_08375 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 80 |
| Pantoea agglomerans CFBP13505 P0401 | 0.30 | PagCFBP13505_RS14815 | | membrane-bound lytic murein transglycosylase MltF | 0.49 | PagCFBP13505_RS13160 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 74 |
| Escherichia coli ECRC98 | 0.30 | JDDGAC_25130 | mltF | membrane-bound lytic murein transglycosylase MltF | 0.50 | JDDGAC_14120 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 87 |
| Escherichia coli ECRC101 | 0.30 | MCAODC_11995 | mltF | membrane-bound lytic murein transglycosylase MltF | 0.50 | MCAODC_01040 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 87 |
| Escherichia coli ECRC100 | 0.30 | OKFHMN_21465 | mltF | membrane-bound lytic murein transglycosylase MltF | 0.50 | OKFHMN_10525 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 79 |
| Escherichia coli Nissle 1917 | 0.30 | ECOLIN_RS14475 | | membrane-bound lytic murein transglycosylase MltF | 0.50 | ECOLIN_RS00590 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.70 | 37 |
| Enterobacter asburiae PDN3 | 0.30 | EX28DRAFT_0090 | | Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein | 0.51 | EX28DRAFT_3703 | | N-acetylmuramoyl-L-alanine amidase | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.30 | OHPLBJKB_01149 | | Membrane-bound lytic murein transglycosylase F | 0.50 | OHPLBJKB_03551 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 74 |
| Escherichia coli ECOR27 | 0.30 | NOLOHH_13140 | mltF | membrane-bound lytic murein transglycosylase MltF | 0.50 | NOLOHH_02870 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 76 |
| Escherichia coli BW25113 | 0.30 | b2558 | mltF | predicted periplasmic binding protein/transglycosylase (RefSeq) | 0.50 | b0110 | ampD | N-acetyl-anhydromuranmyl-L-alanine amidase (NCBI) | low | > 76 |
| Escherichia fergusonii Becca | 0.30 | EFB2_01338 | | Membrane-bound lytic murein transglycosylase F | 0.50 | EFB2_03939 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 86 |
| Escherichia coli ECRC62 | 0.30 | BNILDI_11940 | mltF | membrane-bound lytic murein transglycosylase MltF | 0.50 | BNILDI_08740 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 75 |
| Pantoea sp. MT58 | 0.30 | IAI47_04925 | | membrane-bound lytic murein transglycosylase MltF | 0.50 | IAI47_15840 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 76 |
| Alteromonas macleodii MIT1002 | 0.29 | MIT1002_01026 | | Membrane-bound lytic murein transglycosylase F precursor | 0.53 | MIT1002_03006 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 70 |
Not shown: 12 genomes with orthologs for PP_1036 only; 20 genomes with orthologs for PP_0789 only