Conservation of cofitness between PP_0185 and PP_0137 in Pseudomonas putida KT2440

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_0185 Positive alginate biosynthesis regulatory protein 1.0 PP_0137 glutamate/aspartate-proton DAACS transporter 0.27 15
Pseudomonas fluorescens FW300-N2E3 0.84 AO353_08995 chemotaxis protein CheY 0.86 AO353_10990 glutamate:protein symporter low > 101
Pseudomonas fluorescens GW456-L13 0.82 PfGW456L13_855 Autolysis response regulater LytR 0.86 PfGW456L13_578 Glutamate-aspartate carrier protein low > 87
Pseudomonas fluorescens FW300-N1B4 0.82 Pf1N1B4_2184 Autolysis response regulater LytR 0.84 Pf1N1B4_1888 Glutamate-aspartate carrier protein low > 87
Pseudomonas sp. RS175 0.81 PFR28_04366 Sensory transduction protein LytR 0.85 PFR28_04638 Proton/glutamate-aspartate symporter low > 88
Pseudomonas syringae pv. syringae B728a 0.81 Psyr_0063 Two-component response regulator AlgR 0.87 Psyr_0174 Sodium:dicarboxylate symporter low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.81 Psyr_0063 Two-component response regulator AlgR 0.87 Psyr_0174 Sodium:dicarboxylate symporter low > 86
Pseudomonas fluorescens FW300-N2C3 0.81 AO356_12785 chemotaxis protein CheY 0.85 AO356_11400 glutamate:protein symporter low > 104
Pseudomonas fluorescens FW300-N2E2 0.81 Pf6N2E2_4430 Autolysis response regulater LytR 0.85 Pf6N2E2_4148 Glutamate-aspartate carrier protein 0.33 21
Pseudomonas simiae WCS417 0.79 PS417_27535 chemotaxis protein CheY 0.87 PS417_00470 glutamate:protein symporter low > 88
Pseudomonas fluorescens SBW25-INTG 0.79 PFLU_RS29215 response regulator transcription factor 0.87 PFLU_RS00460 glutamate/aspartate:proton symporter GltP low > 109
Pseudomonas fluorescens SBW25 0.79 PFLU_RS29215 response regulator transcription factor 0.87 PFLU_RS00460 glutamate/aspartate:proton symporter GltP low > 109
Pseudomonas stutzeri RCH2 0.77 Psest_3749 Response regulator of the LytR/AlgR family 0.30 Psest_4075 symporter for L-glutamate, L-glutamine, and L-proline (from data) low > 67
Lysobacter sp. OAE881 0.37 ABIE51_RS02955 LytTR family DNA-binding domain-containing protein 0.28 ABIE51_RS17125 dicarboxylate/amino acid:cation symporter low > 62
Marinobacter adhaerens HP15 0.36 HP15_241 alginate biosynthesis regulatory protein AlgR-like protein 0.26 HP15_2676 proton/sodium-glutamate symport protein low > 73
Rhodanobacter sp. FW510-T8 0.30 OKGIIK_14425 lytT DNA-binding response regulator 0.17 OKGIIK_06560 gltP dicarboxylate/amino acid:cation symporter low > 52
Rhodanobacter denitrificans MT42 0.27 LRK55_RS07675 LytTR family DNA-binding domain-containing protein 0.17 LRK55_RS00475 dicarboxylate/amino acid:cation symporter low > 63
Rhodanobacter denitrificans FW104-10B01 0.26 LRK54_RS07945 LytTR family DNA-binding domain-containing protein 0.17 LRK54_RS00700 dicarboxylate/amino acid:cation symporter low > 59
Kangiella aquimarina DSM 16071 0.26 B158DRAFT_0251 two component transcriptional regulator, LytTR family 0.25 B158DRAFT_2215 Na+/H+-dicarboxylate symporters low > 40
Vibrio cholerae E7946 ATCC 55056 0.22 CSW01_18385 DNA-binding response regulator 0.29 CSW01_05920 dicarboxylate/amino acid:cation symporter low > 62
Echinicola vietnamensis KMM 6221, DSM 17526 0.20 Echvi_1140 Response regulator of the LytR/AlgR family 0.27 Echvi_1519 Na+/H+-dicarboxylate symporters low > 79
Shewanella sp. ANA-3 0.20 Shewana3_2594 putative two-component response-regulatory protein YehT (RefSeq) 0.32 Shewana3_3362 sodium:dicarboxylate symporter (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.19 MIT1002_01189 Transcriptional regulatory protein YehT 0.28 MIT1002_01542 Glutamate-aspartate carrier protein low > 70
Shewanella oneidensis MR-1 0.18 SO2823 response regulator (NCBI ptt file) 0.32 SO0922 proton/glutamate symporter (NCBI ptt file) low > 76
Dickeya dianthicola 67-19 0.18 HGI48_RS16465 two-component system response regulator BtsR 0.71 HGI48_RS07365 glutamate/aspartate:proton symporter GltP low > 71
Dickeya dadantii 3937 0.18 DDA3937_RS16365 two-component system response regulator BtsR 0.71 DDA3937_RS07490 glutamate/aspartate:proton symporter GltP low > 74
Dickeya dianthicola ME23 0.18 DZA65_RS17550 two-component system response regulator BtsR 0.71 DZA65_RS07875 glutamate/aspartate:proton symporter GltP low > 75
Serratia liquefaciens MT49 0.18 IAI46_23615 two-component system response regulator BtsR 0.73 IAI46_01410 glutamate/aspartate:proton symporter GltP low > 86
Enterobacter sp. TBS_079 0.18 MPMX20_03092 Transcriptional regulatory protein BtsR 0.71 MPMX20_00292 Proton/glutamate-aspartate symporter low > 85
Pontibacter actiniarum KMM 6156, DSM 19842 0.17 CA264_16125 DNA-binding response regulator 0.36 CA264_01055 dicarboxylate/amino acid:cation symporter low > 74
Escherichia coli ECRC101 0.17 OKFHMN_23915 btsR two-component system response regulator BtsR 0.71 OKFHMN_12785 gltP glutamate/aspartate:proton symporter GltP — —
Escherichia coli ECOR27 0.17 NOLOHH_15235 btsR two-component system response regulator BtsR 0.71 NOLOHH_05035 gltP glutamate/aspartate:proton symporter GltP low > 57
Escherichia coli ECRC102 0.17 NIAGMN_21850 btsR two-component system response regulator BtsR 0.71 NIAGMN_10630 gltP glutamate/aspartate:proton symporter GltP — —
Escherichia coli BL21 0.17 ECD_02054 putative response regulator in two-component system withYehU 0.71 ECD_03949 glutamate/aspartate:proton symporter low > 60
Escherichia coli ECRC101 0.17 MCAODC_21245 btsR two-component system response regulator BtsR 0.71 MCAODC_03295 gltP glutamate/aspartate:proton symporter GltP — —
Escherichia coli BW25113 0.17 b2125 yehT orf, hypothetical protein (VIMSS) 0.71 b4077 gltP glutamate/aspartate:proton symporter (NCBI) low > 76
Escherichia coli ECRC99 0.17 KEDOAH_04250 btsR two-component system response regulator BtsR 0.71 KEDOAH_15365 gltP glutamate/aspartate:proton symporter GltP — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.17 OHPLBJKB_01586 Transcriptional regulatory protein BtsR 0.71 OHPLBJKB_03963 Proton/glutamate-aspartate symporter low > 73
Escherichia fergusonii Becca 0.17 EFB2_01731 Transcriptional regulatory protein BtsR 0.71 EFB2_04512 Proton/glutamate-aspartate symporter low > 86
Escherichia coli ECRC98 0.17 JDDGAC_28005 btsR two-component system response regulator BtsR 0.71 JDDGAC_16420 gltP glutamate/aspartate:proton symporter GltP — —
Escherichia coli Nissle 1917 0.17 ECOLIN_RS12450 two-component system response regulator BtsR 0.71 ECOLIN_RS23590 glutamate/aspartate:proton symporter GltP low > 52
Enterobacter asburiae PDN3 0.17 EX28DRAFT_0437 two component transcriptional regulator, LytTR family 0.72 EX28DRAFT_4231 Na+/H+-dicarboxylate symporters low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.17 GFF3820 Two-component response-regulatory protein YehT 0.72 GFF1460 Glutamate-aspartate carrier protein low > 78
Escherichia coli ECOR38 0.16 HEPCGN_02640 btsR two-component system response regulator BtsR 0.71 HEPCGN_11410 gltP glutamate/aspartate:proton symporter GltP low > 85
Erwinia tracheiphila SCR3 0.16 LU632_RS20440 btsR two-component system response regulator BtsR 0.73 LU632_RS23310 gltP glutamate/aspartate:proton symporter GltP low > 74
Escherichia coli ECRC62 0.16 BNILDI_14185 btsR two-component system response regulator BtsR 0.71 BNILDI_06490 gltP glutamate/aspartate:proton symporter GltP — —
Klebsiella michiganensis M5al 0.16 BWI76_RS19470 DNA-binding response regulator 0.70 BWI76_RS02105 glutamate/aspartate:proton symporter GltP low > 92
Pectobacterium carotovorum WPP14 0.16 HER17_RS11565 LytTR family DNA-binding domain-containing protein 0.72 HER17_RS14145 glutamate/aspartate:proton symporter GltP low > 75
Shewanella amazonensis SB2B 0.15 Sama_1281 putative two-component response-regulatory protein YehT (RefSeq) 0.33 Sama_2768 proton/glutamate symporter (RefSeq) low > 62
Pantoea sp. MT58 0.15 IAI47_05560 response regulator transcription factor 0.73 IAI47_17710 glutamate/aspartate:proton symporter GltP low > 76
Bacteroides ovatus ATCC 8483 0.15 BACOVA_02521 response regulator receiver domain protein 0.07 BACOVA_00510 transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein low > 94
Shewanella loihica PV-4 0.14 Shew_2329 putative two-component response-regulatory protein YehT (RefSeq) 0.32 Shew_0743 sodium:dicarboxylate symporter (RefSeq) low > 60

Not shown: 30 genomes with orthologs for PP_0185 only; 0 genomes with orthologs for PP_0137 only