Conservation of cofitness between OKFHMN_12000 and OKFHMN_26915 in Escherichia coli ECRC100

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC100 1.0 OKFHMN_12000 tamA autotransporter assembly complex protein TamA 1.0 OKFHMN_26915 astD succinylglutamate-semialdehyde dehydrogenase 0.71 1
Escherichia coli ECRC99 1.00 KEDOAH_16155 tamA autotransporter assembly complex protein TamA 1.00 KEDOAH_01195 astD succinylglutamate-semialdehyde dehydrogenase — —
Escherichia coli ECRC101 1.00 MCAODC_02515 tamA autotransporter assembly complex protein TamA 1.00 MCAODC_18495 astD succinylglutamate-semialdehyde dehydrogenase low > 87
Escherichia coli ECRC98 1.00 JDDGAC_15640 tamA autotransporter assembly complex protein TamA 1.00 JDDGAC_01490 astD succinylglutamate-semialdehyde dehydrogenase low > 86
Escherichia coli ECRC62 1.00 BNILDI_07255 tamA autotransporter assembly complex protein TamA 0.98 BNILDI_16215 astD succinylglutamate-semialdehyde dehydrogenase low > 75
Escherichia coli ECOR27 1.00 NOLOHH_04260 tamA autotransporter assembly complex protein TamA 0.97 NOLOHH_17430 astD succinylglutamate-semialdehyde dehydrogenase low > 75
Escherichia coli ECRC102 1.00 NIAGMN_09850 tamA autotransporter assembly complex protein TamA 1.00 NIAGMN_01150 astD succinylglutamate-semialdehyde dehydrogenase — —
Escherichia coli BW25113 1.00 b4220 ytfM predicted outer membrane protein and surface antigen (NCBI) 0.97 b1746 astD succinylglutamic semialdehyde dehydrogenase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03813 Translocation and assembly module subunit TamA 0.97 OHPLBJKB_01986 N-succinylglutamate 5-semialdehyde dehydrogenase low > 73
Escherichia coli ECOR38 1.00 HEPCGN_10200 tamA autotransporter assembly complex protein TamA 0.96 HEPCGN_05280 astD succinylglutamate-semialdehyde dehydrogenase low > 87
Escherichia coli BL21 1.00 ECD_04091 translocation and assembly module for autotransporter export, outer membrane subunit 0.97 ECD_01715 succinylglutamic semialdehyde dehydrogenase — —
Escherichia fergusonii Becca 1.00 EFB2_04309 Translocation and assembly module subunit TamA 0.96 EFB2_02247 N-succinylglutamate 5-semialdehyde dehydrogenase low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS24510 autotransporter assembly complex protein TamA 0.96 ECOLIN_RS09735 succinylglutamate-semialdehyde dehydrogenase low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF874 Uncharacterized protein YtfM precursor 0.83 GFF3494 Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) low > 78
Enterobacter sp. TBS_079 0.89 MPMX20_00503 Translocation and assembly module subunit TamA 0.80 MPMX20_01867 N-succinylglutamate 5-semialdehyde dehydrogenase low > 85
Enterobacter asburiae PDN3 0.87 EX28DRAFT_3406 Outer membrane protein 0.81 EX28DRAFT_1750 succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) low > 76
Klebsiella michiganensis M5al 0.83 BWI76_RS02775 outer membrane protein assembly factor 0.76 BWI76_RS11680 succinylglutamate-semialdehyde dehydrogenase low > 92
Serratia liquefaciens MT49 0.73 IAI46_01770 outer membrane protein assembly factor 0.65 IAI46_15325 succinylglutamate-semialdehyde dehydrogenase low > 86
Pantoea sp. MT58 0.72 IAI47_02715 outer membrane protein assembly factor 0.67 IAI47_11085 succinylglutamate-semialdehyde dehydrogenase low > 76
Rahnella sp. WP5 0.72 EX31_RS08695 outer membrane protein assembly factor 0.67 EX31_RS17400 succinylglutamate-semialdehyde dehydrogenase low > 89
Vibrio cholerae E7946 ATCC 55056 0.36 CSW01_12905 outer membrane protein assembly factor 0.56 CSW01_13240 N-succinylglutamate 5-semialdehyde dehydrogenase low > 62
Pseudomonas fluorescens FW300-N2C3 0.29 AO356_01050 hypothetical protein 0.56 AO356_18740 succinylglutamate-semialdehyde dehydrogenase low > 104
Pseudomonas fluorescens FW300-N1B4 0.29 Pf1N1B4_3997 Uncharacterized protein YtfM precursor 0.56 Pf1N1B4_3444 Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) — —
Pseudomonas fluorescens FW300-N2E2 0.29 Pf6N2E2_144 Uncharacterized protein YtfM precursor 0.56 Pf6N2E2_5668 Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) low > 103
Pseudomonas fluorescens GW456-L13 0.29 PfGW456L13_2601 Uncharacterized protein YtfM precursor 0.56 PfGW456L13_1974 Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) (from data) low > 87
Pseudomonas fluorescens FW300-N2E3 0.28 AO353_27865 hypothetical protein 0.56 AO353_03010 succinylglutamate-semialdehyde dehydrogenase low > 101
Marinobacter adhaerens HP15 0.28 HP15_2341 surface antigen (D15) 0.60 HP15_3039 N-succinylglutamate 5-semialdehyde dehydrogenase low > 73
Pseudomonas syringae pv. syringae B728a ΔmexB 0.28 Psyr_2478 surface antigen (D15):Surface antigen variable number 0.56 Psyr_3562 succinylglutamic semialdehyde dehydrogenase low > 86
Pseudomonas syringae pv. syringae B728a 0.28 Psyr_2478 surface antigen (D15):Surface antigen variable number 0.56 Psyr_3562 succinylglutamic semialdehyde dehydrogenase low > 86
Pseudomonas sp. RS175 0.28 PFR28_02752 Translocation and assembly module subunit TamA 0.56 PFR28_03280 N-succinylglutamate 5-semialdehyde dehydrogenase low > 88
Pseudomonas fluorescens SBW25 0.28 PFLU_RS18920 outer membrane protein assembly factor 0.55 PFLU_RS23300 succinylglutamate-semialdehyde dehydrogenase low > 109
Pseudomonas fluorescens SBW25-INTG 0.28 PFLU_RS18920 outer membrane protein assembly factor 0.55 PFLU_RS23300 succinylglutamate-semialdehyde dehydrogenase low > 109
Pseudomonas simiae WCS417 0.27 PS417_16970 membrane protein 0.57 PS417_21695 succinylglutamate-semialdehyde dehydrogenase low > 88
Pseudomonas putida KT2440 0.27 PP_2892 conserved exported protein of unknown function 0.55 PP_4478 N-succinylglutamate 5-semialdehyde dehydrogenase low > 96
Shewanella amazonensis SB2B 0.27 Sama_1616 hypothetical protein (RefSeq) 0.58 Sama_3009 astD Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) (from data) low > 62
Shewanella loihica PV-4 0.25 Shew_2172 surface antigen (D15) (RefSeq) 0.57 Shew_0580 succinylglutamic semialdehyde dehydrogenase (RefSeq) — —
Shewanella oneidensis MR-1 0.25 SO2114 conserved hypothetical protein (NCBI ptt file) 0.58 SO0619 astD Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) (from data) low > 76
Shewanella sp. ANA-3 0.25 Shewana3_1894 surface antigen (D15) (RefSeq) 0.58 Shewana3_0612 astD succinylglutamic semialdehyde dehydrogenase (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.24 MIT1002_04048 Autotransporter assembly factor TamA 0.58 MIT1002_00435 N-succinylglutamate 5-semialdehyde dehydrogenase low > 70
Paraburkholderia graminis OAS925 0.12 ABIE53_001263 translocation and assembly module TamA 0.54 ABIE53_001772 succinylglutamic semialdehyde dehydrogenase low > 113
Burkholderia phytofirmans PsJN 0.12 BPHYT_RS04945 membrane protein 0.56 BPHYT_RS07710 succinylglutamate-semialdehyde dehydrogenase — —
Paraburkholderia sabiae LMG 24235 0.12 QEN71_RS25050 autotransporter assembly complex family protein 0.53 QEN71_RS23360 succinylglutamate-semialdehyde dehydrogenase — —
Paraburkholderia bryophila 376MFSha3.1 0.11 H281DRAFT_00153 autotransporter secretion outer membrane protein TamA 0.53 H281DRAFT_06481 succinylglutamic semialdehyde dehydrogenase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.08 A4249_RS02875 autotransporter assembly complex family protein 0.41 A4249_RS02845 succinylglutamate-semialdehyde dehydrogenase low > 48

Not shown: 20 genomes with orthologs for OKFHMN_12000 only; 6 genomes with orthologs for OKFHMN_26915 only