Conservation of cofitness between OKFHMN_12000 and OKFHMN_26675 in Escherichia coli ECRC100

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC100 1.0 OKFHMN_12000 tamA autotransporter assembly complex protein TamA 1.0 OKFHMN_26675 nimT 2-nitroimidazole transporter 0.59 4
Escherichia coli ECRC98 1.00 JDDGAC_15640 tamA autotransporter assembly complex protein TamA 1.00 JDDGAC_01250 nimT 2-nitroimidazole transporter low > 86
Escherichia coli ECOR27 1.00 NOLOHH_04260 tamA autotransporter assembly complex protein TamA 0.99 NOLOHH_17205 nimT 2-nitroimidazole transporter low > 75
Escherichia coli ECRC102 1.00 NIAGMN_09850 tamA autotransporter assembly complex protein TamA 1.00 NIAGMN_01390 nimT 2-nitroimidazole transporter — —
Escherichia coli ECRC62 1.00 BNILDI_07255 tamA autotransporter assembly complex protein TamA 0.99 BNILDI_15990 nimT 2-nitroimidazole transporter low > 75
Escherichia coli ECRC101 1.00 MCAODC_02515 tamA autotransporter assembly complex protein TamA 1.00 MCAODC_18735 nimT 2-nitroimidazole transporter low > 87
Escherichia coli ECRC99 1.00 KEDOAH_16155 tamA autotransporter assembly complex protein TamA 1.00 KEDOAH_01435 nimT 2-nitroimidazole transporter — —
Escherichia coli BW25113 1.00 b4220 ytfM predicted outer membrane protein and surface antigen (NCBI) 1.00 b1791 yeaN predicted transporter (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03813 Translocation and assembly module subunit TamA 1.00 OHPLBJKB_01942 2-nitroimidazole transporter low > 73
Escherichia coli ECOR38 1.00 HEPCGN_10200 tamA autotransporter assembly complex protein TamA 0.99 HEPCGN_05065 nimT 2-nitroimidazole transporter low > 87
Escherichia coli BL21 1.00 ECD_04091 translocation and assembly module for autotransporter export, outer membrane subunit 1.00 ECD_01760 putative MFS transporter, inner membrane protein low > 61
Escherichia fergusonii Becca 1.00 EFB2_04309 Translocation and assembly module subunit TamA 1.00 EFB2_02204 2-nitroimidazole transporter low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS24510 autotransporter assembly complex protein TamA 0.99 ECOLIN_RS09980 2-nitroimidazole transporter — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF874 Uncharacterized protein YtfM precursor 0.74 GFF3465 hypothetical protein low > 78
Enterobacter sp. TBS_079 0.89 MPMX20_00503 Translocation and assembly module subunit TamA 0.70 MPMX20_01834 2-nitroimidazole transporter 0.36 59
Enterobacter asburiae PDN3 0.87 EX28DRAFT_3406 Outer membrane protein 0.74 EX28DRAFT_1781 cyanate transporter low > 76
Klebsiella michiganensis M5al 0.83 BWI76_RS02775 outer membrane protein assembly factor 0.72 BWI76_RS11450 cyanate MFS transporter low > 92
Serratia liquefaciens MT49 0.73 IAI46_01770 outer membrane protein assembly factor 0.34 IAI46_20590 MFS transporter low > 86
Pantoea sp. MT58 0.72 IAI47_02715 outer membrane protein assembly factor 0.28 IAI47_20605 MFS transporter low > 76
Rahnella sp. WP5 0.72 EX31_RS08695 outer membrane protein assembly factor 0.29 EX31_RS16910 MFS transporter low > 89
Pseudomonas fluorescens FW300-N2E2 0.29 Pf6N2E2_144 Uncharacterized protein YtfM precursor 0.28 Pf6N2E2_5409 Cyanate transport protein CynX low > 103
Pseudomonas fluorescens FW300-N2C3 0.29 AO356_01050 hypothetical protein 0.28 AO356_17415 MFS transporter low > 104
Pseudomonas fluorescens FW300-N1B4 0.29 Pf1N1B4_3997 Uncharacterized protein YtfM precursor 0.29 Pf1N1B4_910 Cyanate transport protein CynX low > 87
Pseudomonas fluorescens GW456-L13 0.29 PfGW456L13_2601 Uncharacterized protein YtfM precursor 0.27 PfGW456L13_1703 Cyanate transport protein CynX low > 87
Pseudomonas fluorescens FW300-N2E3 0.28 AO353_27865 hypothetical protein 0.28 AO353_04590 MFS transporter low > 101
Pseudomonas syringae pv. syringae B728a 0.28 Psyr_2478 surface antigen (D15):Surface antigen variable number 0.31 Psyr_1076 Cyanate transport system protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.28 Psyr_2478 surface antigen (D15):Surface antigen variable number 0.31 Psyr_1076 Cyanate transport system protein low > 86
Pseudomonas sp. RS175 0.28 PFR28_02752 Translocation and assembly module subunit TamA 0.29 PFR28_03538 putative transporter YycB low > 88
Pseudomonas fluorescens SBW25 0.28 PFLU_RS18920 outer membrane protein assembly factor 0.28 PFLU_RS04995 CynX/NimT family MFS transporter low > 109
Pseudomonas fluorescens SBW25-INTG 0.28 PFLU_RS18920 outer membrane protein assembly factor 0.28 PFLU_RS04995 CynX/NimT family MFS transporter low > 109
Pseudomonas simiae WCS417 0.27 PS417_16970 membrane protein 0.27 PS417_04925 MFS transporter low > 88
Pseudomonas putida KT2440 0.27 PP_2892 conserved exported protein of unknown function 0.29 PP_0970 Cyanate MFS transporter low > 96
Xanthomonas campestris pv. campestris strain 8004 0.20 Xcc-8004.5193.1 Outer membrane protein assembly factor YaeT precursor 0.16 Xcc-8004.2329.1 MFS transporter low > 74
Lysobacter sp. OAE881 0.17 ABIE51_RS01235 autotransporter assembly complex family protein 0.17 ABIE51_RS18570 MFS transporter low > 62
Paraburkholderia graminis OAS925 0.12 ABIE53_001263 translocation and assembly module TamA 0.24 ABIE53_005196 CP family cyanate transporter-like MFS transporter low > 113
Paraburkholderia sabiae LMG 24235 0.12 QEN71_RS25050 autotransporter assembly complex family protein 0.24 QEN71_RS20755 MFS transporter low > 153
Paraburkholderia bryophila 376MFSha3.1 0.11 H281DRAFT_00153 autotransporter secretion outer membrane protein TamA 0.23 H281DRAFT_01563 MFS transporter, CP family, cyanate transporter low > 103
Ralstonia sp. UNC404CL21Col 0.11 ABZR87_RS00015 autotransporter assembly complex family protein 0.27 ABZR87_RS20935 CynX/NimT family MFS transporter low > 80
Ralstonia solanacearum GMI1000 0.11 RS_RS11970 outer membrane protein assembly factor 0.27 RS_RS20315 MFS transporter low > 80
Ralstonia solanacearum IBSBF1503 0.11 RALBFv3_RS04420 outer membrane protein assembly factor 0.25 RALBFv3_RS20355 MFS transporter low > 76
Ralstonia solanacearum UW163 0.11 UW163_RS09250 outer membrane protein assembly factor 0.25 UW163_RS18820 MFS transporter — —
Ralstonia solanacearum PSI07 0.11 RPSI07_RS12950 outer membrane protein assembly factor 0.26 RPSI07_RS02495 MFS transporter low > 81
Herbaspirillum seropedicae SmR1 0.11 HSERO_RS07725 membrane protein 0.41 HSERO_RS21180 MFS transporter low > 78
Castellaniella sp019104865 MT123 0.08 ABCV34_RS08915 BamA/TamA family outer membrane protein 0.24 ABCV34_RS03490 MFS transporter low > 48

Not shown: 20 genomes with orthologs for OKFHMN_12000 only; 6 genomes with orthologs for OKFHMN_26675 only