Conservation of cofitness between NOLOHH_11130 and NOLOHH_03355 in Escherichia coli ECOR27

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR27 1.0 NOLOHH_11130 yggR Uncharacterized protein YggR 1.0 NOLOHH_03355 nhaR transcriptional activator NhaR low > 75
Escherichia coli ECRC62 1.00 BNILDI_09710 yggR Uncharacterized protein YggR 1.00 BNILDI_08250 nhaR transcriptional activator NhaR low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_00766 putative protein YggR 1.00 OHPLBJKB_03641 Transcriptional activator protein NhaR low > 73
Escherichia coli ECOR38 0.99 HEPCGN_18565 yggR Uncharacterized protein YggR 1.00 HEPCGN_09010 nhaR transcriptional activator NhaR low > 87
Escherichia coli ECRC100 0.98 OKFHMN_19260 yggR Uncharacterized protein YggR 1.00 OKFHMN_11025 nhaR transcriptional activator NhaR low > 80
Escherichia coli BL21 0.98 ECD_02780 putative PilT family AAA+ ATPase 1.00 ECD_00019 transcriptional activator of nhaA low > 61
Escherichia coli BW25113 0.98 b2950 yggR putative protein transport (VIMSS) 1.00 b0020 nhaR DNA-binding transcriptional activator (NCBI) low > 76
Escherichia coli ECRC98 0.98 JDDGAC_22890 yggR Uncharacterized protein YggR 1.00 JDDGAC_14620 nhaR transcriptional activator NhaR low > 86
Escherichia coli ECRC99 0.98 KEDOAH_08880 yggR Uncharacterized protein YggR 1.00 KEDOAH_17130 nhaR transcriptional activator NhaR — —
Escherichia coli ECRC101 0.98 MCAODC_09780 yggR Uncharacterized protein YggR 1.00 MCAODC_01540 nhaR transcriptional activator NhaR low > 87
Escherichia coli ECRC102 0.98 NIAGMN_17025 yggR Uncharacterized protein YggR 1.00 NIAGMN_08875 nhaR transcriptional activator NhaR — —
Escherichia fergusonii Becca 0.98 EFB2_00952 putative protein YggR 0.96 EFB2_04023 Transcriptional activator protein NhaR low > 86
Escherichia coli Nissle 1917 0.98 ECOLIN_RS16410 type IV pilus twitching motility protein PilT 0.96 ECOLIN_RS00110 transcriptional activator NhaR low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.80 GFF3053 Twitching motility protein PilT 0.93 GFF1120 Transcriptional activator NhaR low > 78
Enterobacter sp. TBS_079 0.74 MPMX20_03808 putative protein YggR 0.92 MPMX20_00723 Transcriptional activator protein NhaR low > 85
Enterobacter asburiae PDN3 0.72 EX28DRAFT_2988 pilus retraction protein PilT 0.92 EX28DRAFT_3629 Transcriptional regulator low > 76
Klebsiella michiganensis M5al 0.68 BWI76_RS24095 twitching motility protein PilT 0.93 BWI76_RS04320 transcriptional activator NhaR low > 92
Dickeya dadantii 3937 0.60 DDA3937_RS17295 type IV pilus twitching motility protein PilT 0.77 DDA3937_RS18355 transcriptional activator NhaR — —
Pantoea sp. MT58 0.60 IAI47_03600 type IV pilus twitching motility protein PilT 0.73 IAI47_16160 transcriptional activator NhaR low > 76
Pectobacterium carotovorum WPP14 0.58 HER17_RS03815 type IV pilus twitching motility protein PilT 0.80 HER17_RS02855 transcriptional activator NhaR low > 75
Rahnella sp. WP5 0.55 EX31_RS02680 type IV pilus twitching motility protein PilT 0.79 EX31_RS03885 transcriptional activator NhaR low > 89
Serratia liquefaciens MT49 0.52 IAI46_21405 type IV pilus twitching motility protein PilT 0.83 IAI46_03090 transcriptional activator NhaR low > 86
Vibrio cholerae E7946 ATCC 55056 0.48 CSW01_02460 type IV pili twitching motility protein PilT 0.63 CSW01_03550 transcriptional activator protein NhaR low > 62
Dechlorosoma suillum PS 0.47 Dsui_0604 pilus retraction protein PilT 0.28 Dsui_1151 transcriptional regulator low > 51
Shewanella amazonensis SB2B 0.47 Sama_2476 twitching motility protein (RefSeq) 0.57 Sama_0870 nhaR transcriptional activator NhaR (RefSeq) low > 62
Shewanella sp. ANA-3 0.46 Shewana3_1195 pilus retraction ATPase PilT (RefSeq) 0.56 Shewana3_3036 nhaR transcriptional activator NhaR (RefSeq) low > 73
Shewanella oneidensis MR-1 0.46 SO3351 pilT twitching motility protein PilT (NCBI ptt file) 0.57 SO1338 nhaR transcriptional activator protein NhaR (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.46 MIT1002_03060 Twitching mobility protein 0.25 MIT1002_03553 Na(+)/H(+) antiporter regulatory protein low > 70
Kangiella aquimarina DSM 16071 0.46 B158DRAFT_0195 pilus retraction protein PilT 0.18 B158DRAFT_0581 transcriptional regulator, LysR family low > 40
Shewanella loihica PV-4 0.45 Shew_1138 twitching motility protein (RefSeq) 0.60 Shew_1044 nhaR transcriptional activator NhaR (RefSeq) low > 60
Acidovorax sp. GW101-3H11 0.45 Ac3H11_4473 Twitching motility protein PilT 0.33 Ac3H11_815 Transcriptional regulator, LysR family low > 79
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_0478 pilus retraction ATPase PilT 0.35 Psyr_2422 transcriptional regulator, LysR family low > 86
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_0478 pilus retraction ATPase PilT 0.35 Psyr_2422 transcriptional regulator, LysR family low > 86
Pseudomonas fluorescens FW300-N1B4 0.43 Pf1N1B4_2343 Twitching motility protein PilT 0.33 Pf1N1B4_3936 Transcriptional regulator, LysR family low > 87
Pseudomonas fluorescens FW300-N2C3 0.43 AO356_13430 twitching motility protein PilT 0.33 AO356_01805 LysR family transcriptional regulator low > 104
Pseudomonas fluorescens FW300-N2E3 0.43 AO353_08155 twitching motility protein PilT 0.33 AO353_20115 LysR family transcriptional regulator low > 101
Pseudomonas fluorescens GW456-L13 0.43 PfGW456L13_1012 Twitching motility protein PilT 0.33 PfGW456L13_2543 Transcriptional regulator, LysR family — —
Pseudomonas fluorescens SBW25-INTG 0.43 PFLU_RS28365 type IV pilus twitching motility protein PilT 0.34 PFLU_RS10530 transcriptional activator NhaR low > 109
Pseudomonas fluorescens SBW25 0.43 PFLU_RS28365 type IV pilus twitching motility protein PilT 0.34 PFLU_RS10530 transcriptional activator NhaR low > 109
Pseudomonas sp. RS175 0.43 PFR28_04241 Twitching mobility protein 0.34 PFR28_01216 Transcriptional activator protein NhaR low > 88
Pseudomonas simiae WCS417 0.43 PS417_26720 twitching motility protein PilT 0.33 PS417_10445 LysR family transcriptional regulator low > 88
Pseudomonas fluorescens FW300-N2E2 0.43 Pf6N2E2_4602 Twitching motility protein PilT 0.33 Pf6N2E2_2228 Transcriptional regulator, LysR family low > 103
Marinobacter adhaerens HP15 0.43 HP15_289 twitching motility protein PilT 0.24 HP15_1551 transcriptional Regulator, LysR family protein low > 73
Hydrogenophaga sp. GW460-11-11-14-LB1 0.41 GFF2721 Twitching motility protein PilT 0.22 GFF1910 Cys regulon transcriptional activator CysB low > 90
Herbaspirillum seropedicae SmR1 0.40 HSERO_RS19000 twitching motility protein PilT 0.29 HSERO_RS19615 LysR family transcriptional regulator low > 78
Pseudomonas putida KT2440 0.38 PP_5093 twitching motility protein 0.35 PP_2444 Transcriptional regulator, LysR family low > 96

Not shown: 24 genomes with orthologs for NOLOHH_11130 only; 8 genomes with orthologs for NOLOHH_03355 only