Conservation of cofitness between JDDGAC_10725 and JDDGAC_20820 in Escherichia coli ECRC98

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC98 1.0 JDDGAC_10725 kdpD two-component system sensor histidine kinase KdpD 1.0 JDDGAC_20820 nirD nitrite reductase small subunit NirD 0.57 14
Escherichia coli ECRC102 1.00 NIAGMN_05130 kdpD two-component system sensor histidine kinase KdpD 1.00 NIAGMN_14960 nirD nitrite reductase small subunit NirD — —
Escherichia coli ECRC99 1.00 KEDOAH_20895 kdpD two-component system sensor histidine kinase KdpD 1.00 KEDOAH_10950 nirD nitrite reductase small subunit NirD — —
Escherichia coli ECRC100 1.00 OKFHMN_07075 kdpD two-component system sensor histidine kinase KdpD 1.00 OKFHMN_17190 nirD nitrite reductase small subunit NirD low > 80
Escherichia coli ECRC101 1.00 MCAODC_26290 kdpD two-component system sensor histidine kinase KdpD 1.00 MCAODC_07720 nirD nitrite reductase small subunit NirD low > 87
Escherichia coli BL21 1.00 ECD_00652 fused sensory histidine kinase in two-component regulatory system with KdpE: signal sensing protein 1.00 ECD_03217 nitrite reductase (NADH) small subunit low > 61
Escherichia coli ECOR27 1.00 NOLOHH_23455 kdpD two-component system sensor histidine kinase KdpD 1.00 NOLOHH_08990 nirD nitrite reductase small subunit NirD low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03022 Sensor protein KdpD 1.00 OHPLBJKB_00336 Nitrite reductase (NADH) small subunit low > 73
Escherichia coli ECRC62 1.00 BNILDI_21460 kdpD two-component system sensor histidine kinase KdpD 1.00 BNILDI_02530 nirD nitrite reductase small subunit NirD low > 75
Escherichia coli ECOR38 1.00 HEPCGN_01160 kdpD two-component system sensor histidine kinase KdpD 1.00 HEPCGN_16020 nirD nitrite reductase small subunit NirD low > 87
Escherichia coli BW25113 0.99 b0695 kdpD fused sensory histidine kinase in two-component regulatory system with KdpE: signal sensing protein (NCBI) 1.00 b3366 nirD nitrite reductase small subunit (NCBI) low > 76
Escherichia coli Nissle 1917 0.99 ECOLIN_RS03755 two-component system sensor histidine kinase KdpD 1.00 ECOLIN_RS19275 nitrite reductase small subunit NirD low > 55
Escherichia fergusonii Becca 0.99 EFB2_03401 Sensor protein KdpD 1.00 EFB2_00456 Nitrite reductase (NADH) small subunit low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.88 GFF4607 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) 0.94 GFF3703 Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4) low > 78
Enterobacter asburiae PDN3 0.83 EX28DRAFT_2283 Osmosensitive K+ channel histidine kinase 0.78 EX28DRAFT_4161 nitrite reductase [NAD(P)H], small subunit low > 76
Enterobacter sp. TBS_079 0.83 MPMX20_01338 Sensor protein KdpD 0.84 MPMX20_04270 Nitrite reductase (NADH) small subunit low > 85
Klebsiella michiganensis M5al 0.83 BWI76_RS08305 two-component sensor histidine kinase 0.94 BWI76_RS26045 nitrite reductase small subunit low > 92
Rahnella sp. WP5 0.68 EX31_RS23335 two-component system sensor histidine kinase KdbD 0.75 EX31_RS04675 nitrite reductase small subunit NirD low > 89
Serratia liquefaciens MT49 0.68 IAI46_06165 two-component system sensor histidine kinase KdbD 0.76 IAI46_23660 nitrite reductase small subunit NirD low > 86
Pectobacterium carotovorum WPP14 0.66 HER17_RS15045 two-component system sensor histidine kinase KdpD 0.67 HER17_RS01840 nitrite reductase small subunit NirD low > 75
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS24345 DUF4118 domain-containing protein 0.42 QEN71_RS37805 nitrite reductase small subunit NirD low > 153
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS06460 histidine kinase 0.42 BPHYT_RS09845 nitrite reductase — —
Paraburkholderia bryophila 376MFSha3.1 0.41 H281DRAFT_04532 two-component system, OmpR family, sensor histidine kinase KdpD 0.41 H281DRAFT_00663 assimilatory nitrite reductase (NAD(P)H) small subunit (EC 1.7.1.4) low > 103
Cupriavidus basilensis FW507-4G11 0.41 RR42_RS00495 histidine kinase 0.42 RR42_RS31790 nitrite reductase low > 128
Paraburkholderia graminis OAS925 0.41 ABIE53_001556 two-component system sensor histidine kinase KdpD 0.41 ABIE53_002206 nitrite reductase (NADH) small subunit — —
Acidovorax sp. GW101-3H11 0.41 Ac3H11_2408 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) 0.43 Ac3H11_2636 Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4) — —
Ralstonia solanacearum PSI07 0.40 RPSI07_RS08140 sensor histidine kinase KdpD 0.45 RPSI07_RS05605 nitrite reductase (NAD(P)H) small subunit low > 81
Ralstonia solanacearum GMI1000 0.40 RS_RS16960 sensor histidine kinase KdpD 0.43 RS_RS23030 nitrite reductase (NAD(P)H) small subunit low > 80
Ralstonia solanacearum UW163 0.40 UW163_RS04465 sensor histidine kinase KdpD 0.45 UW163_RS21130 nitrite reductase (NAD(P)H) small subunit — —
Ralstonia solanacearum IBSBF1503 0.40 RALBFv3_RS09130 sensor histidine kinase KdpD 0.45 RALBFv3_RS18000 nitrite reductase (NAD(P)H) small subunit low > 76
Herbaspirillum seropedicae SmR1 0.39 HSERO_RS18855 sensor protein KdpD 0.40 HSERO_RS14540 nitrite reductase low > 78
Ralstonia sp. UNC404CL21Col 0.39 ABZR87_RS04525 sensor histidine kinase KdpD 0.44 ABZR87_RS18875 nitrite reductase small subunit NirD low > 80
Dyella japonica UNC79MFTsu3.2 0.28 ABZR86_RS13210 sensor histidine kinase KdpD 0.37 ABZR86_RS03860 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) low > 74
Pseudomonas fluorescens FW300-N2E2 0.27 Pf6N2E2_2491 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) 0.36 Pf6N2E2_1115 Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4) low > 103
Pseudomonas sp. S08-1 0.27 OH686_01890 Osmosensitive K+ channel histidine kinase KdpD 0.37 OH686_20570 Nitrite reductase [NAD(P)H] small subunit low > 80
Pseudomonas sp. RS175 0.27 PFR28_00942 Sensor protein KdpD 0.35 PFR28_01857 Nitrite reductase (NADH) small subunit low > 88
Pseudomonas fluorescens FW300-N2C3 0.27 AO356_03300 histidine kinase 0.36 AO356_26205 nitrite reductase low > 104
Pseudomonas syringae pv. syringae B728a ΔmexB 0.26 Psyr_2050 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Osmosensitive K+ channel His kinase sensor:UspA 0.35 Psyr_3100 nitrite reductase [NAD(P)H], small subunit low > 86
Pseudomonas syringae pv. syringae B728a 0.26 Psyr_2050 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Osmosensitive K+ channel His kinase sensor:UspA 0.35 Psyr_3100 nitrite reductase [NAD(P)H], small subunit — —
Pseudomonas simiae WCS417 0.26 PS417_08300 histidine kinase 0.34 PS417_14725 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) low > 88
Pseudomonas fluorescens SBW25-INTG 0.26 PFLU_RS08240 sensor histidine kinase KdpD 0.35 PFLU_RS16710 nitrite reductase small subunit NirD low > 109
Pseudomonas fluorescens SBW25 0.26 PFLU_RS08240 sensor histidine kinase KdpD 0.35 PFLU_RS16710 nitrite reductase small subunit NirD low > 109
Pseudomonas putida KT2440 0.25 PP_4158 sensor protein 0.35 PP_1706 Nitrite reductase low > 96
Pseudomonas fluorescens FW300-N1B4 0.25 Pf1N1B4_312 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) 0.34 Pf1N1B4_5041 Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4) low > 87
Mycobacterium tuberculosis H37Rv 0.21 Rv1028c Probable sensor protein KdpD 0.37 Rv0253 Probable nitrite reductase [NAD(P)H] small subunit NirD low > 58

Not shown: 26 genomes with orthologs for JDDGAC_10725 only; 5 genomes with orthologs for JDDGAC_20820 only