Conservation of cofitness between IAI47_11310 and IAI47_16055 in Pantoea sp. MT58

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pantoea sp. MT58 1.0 IAI47_11310 redox-regulated ATPase YchF 1.0 IAI47_16055 RNA polymerase-associated protein RapA 0.37 14
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF2784 GTP-binding and nucleic acid-binding protein YchF 0.85 GFF183 RNA polymerase associated protein RapA (EC 3.6.1.-) low > 78
Dickeya dianthicola 67-19 0.94 HGI48_RS10975 redox-regulated ATPase YchF 0.78 HGI48_RS18170 RNA polymerase-associated protein RapA low > 71
Dickeya dianthicola ME23 0.94 DZA65_RS11435 redox-regulated ATPase YchF 0.78 DZA65_RS19310 RNA polymerase-associated protein RapA low > 75
Erwinia tracheiphila SCR3 0.94 LU632_RS13950 ychF redox-regulated ATPase YchF 0.87 LU632_RS02805 rapA RNA polymerase-associated protein RapA low > 74
Dickeya dadantii 3937 0.94 DDA3937_RS11035 redox-regulated ATPase YchF 0.78 DDA3937_RS18235 RNA polymerase-associated protein RapA low > 74
Escherichia coli ECRC101 0.93 OKFHMN_28410 ychF redox-regulated ATPase YchF 0.84 OKFHMN_10800 rapA RNA polymerase-associated protein RapA — —
Escherichia coli ECOR38 0.93 HEPCGN_24875 ychF redox-regulated ATPase YchF 0.84 HEPCGN_08790 rapA RNA polymerase-associated protein RapA — —
Escherichia coli ECOR27 0.93 NOLOHH_20650 ychF redox-regulated ATPase YchF 0.84 NOLOHH_03145 rapA RNA polymerase-associated protein RapA — —
Escherichia coli ECRC99 0.93 KEDOAH_25405 ychF redox-regulated ATPase YchF 0.84 KEDOAH_17355 rapA RNA polymerase-associated protein RapA — —
Escherichia coli ECRC101 0.93 MCAODC_21850 ychF redox-regulated ATPase YchF 0.84 MCAODC_01315 rapA RNA polymerase-associated protein RapA — —
Escherichia coli ECRC102 0.93 NIAGMN_27825 ychF redox-regulated ATPase YchF 0.84 NIAGMN_08650 rapA RNA polymerase-associated protein RapA — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.93 OHPLBJKB_02484 Ribosome-binding ATPase YchF 0.84 OHPLBJKB_03599 RNA polymerase-associated protein RapA low > 73
Escherichia coli BW25113 0.93 b1203 ychF translation-associated GTPase (NCBI) 0.84 b0059 hepA ATP-dependent helicase HepA (NCBI) — —
Escherichia coli ECRC98 0.93 JDDGAC_06165 ychF redox-regulated ATPase YchF 0.84 JDDGAC_14395 rapA RNA polymerase-associated protein RapA — —
Escherichia fergusonii Becca 0.93 EFB2_02724 Ribosome-binding ATPase YchF 0.84 EFB2_03986 RNA polymerase-associated protein RapA low > 86
Escherichia coli Nissle 1917 0.93 ECOLIN_RS07280 redox-regulated ATPase YchF 0.84 ECOLIN_RS00315 RNA polymerase-associated protein RapA — —
Escherichia coli ECRC62 0.93 BNILDI_18805 ychF redox-regulated ATPase YchF 0.84 BNILDI_08460 rapA RNA polymerase-associated protein RapA — —
Escherichia coli BL21 0.93 ECD_01178 catalase inhibitor protein; ATPase, K+-dependent, ribosome-associated 0.84 ECD_00061 RNA polymerase remodeling/recycling factor ATPase; RNA polymerase-associated, ATP-dependent RNA translocase — —
Pectobacterium carotovorum WPP14 0.93 HER17_RS10445 redox-regulated ATPase YchF 0.79 HER17_RS02990 RNA polymerase-associated protein RapA low > 75
Serratia liquefaciens MT49 0.91 IAI46_10240 redox-regulated ATPase YchF 0.84 IAI46_03275 RNA polymerase-associated protein RapA — —
Rahnella sp. WP5 0.90 EX31_RS07380 redox-regulated ATPase YchF 0.81 EX31_RS03745 RNA polymerase-associated protein RapA 0.50 7
Enterobacter sp. TBS_079 0.89 MPMX20_02645 Ribosome-binding ATPase YchF 0.85 MPMX20_00753 RNA polymerase-associated protein RapA 0.39 74
Enterobacter asburiae PDN3 0.89 EX28DRAFT_0821 GTP-binding protein YchF 0.86 EX28DRAFT_3651 Superfamily II DNA/RNA helicases, SNF2 family — —
Klebsiella michiganensis M5al 0.89 BWI76_RS17485 GTP-binding protein YchF 0.85 BWI76_RS04570 RNA polymerase-associated protein RapA — —
Shewanella amazonensis SB2B 0.81 Sama_2571 GTP-dependent nucleic acid-binding protein EngD (RefSeq) 0.58 Sama_3131 ATP-dependent helicase HepA (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.81 MIT1002_01504 Ribosome-binding ATPase YchF 0.43 MIT1002_00659 RNA polymerase-associated protein RapA low > 70
Shewanella oneidensis MR-1 0.80 SO1185 conserved hypothetical protein TIGR00092 (NCBI ptt file) 0.58 SO0575 hepA RNA polymerase-associated protein HepA (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.80 Shewana3_1012 GTP-dependent nucleic acid-binding protein EngD (RefSeq) 0.58 Shewana3_0574 ATP-dependent helicase HepA (RefSeq) low > 73
Shewanella loihica PV-4 0.78 Shew_2919 translation-associated GTPase (RefSeq) 0.57 Shew_0457 ATP-dependent helicase HepA (RefSeq) low > 60
Marinobacter adhaerens HP15 0.75 HP15_704 translation-associated GTPase 0.40 HP15_3376 RNA polymerase-associated protein RapA low > 73
Vibrio cholerae E7946 ATCC 55056 0.74 CSW01_10875 redox-regulated ATPase YchF 0.64 CSW01_12705 RNA polymerase-associated protein RapA low > 62
Pseudomonas sp. S08-1 0.73 OH686_07965 GTP-binding and nucleic acid-binding protein YchF 0.47 OH686_19955 RNA polymerase associated protein RapA low > 80
Pseudomonas putida KT2440 0.73 PP_0719 ribosome-associated potassium-dependent informational ATP/GTPase 0.48 PP_1145 RNA polymerase-associated protein RapA low > 96
Acinetobacter radioresistens SK82 0.72 MPMX26_01861 Ribosome-binding ATPase YchF 0.37 MPMX26_01027 RNA polymerase-associated protein RapA low > 36
Pseudomonas sp. RS175 0.72 PFR28_03664 Ribosome-binding ATPase YchF 0.48 PFR28_00612 RNA polymerase-associated protein RapA low > 88
Pseudomonas stutzeri RCH2 0.72 Psest_1103 GTP-binding protein YchF 0.47 Psest_1327 Superfamily II DNA/RNA helicases, SNF2 family low > 67
Pseudomonas fluorescens FW300-N2E3 0.72 AO353_14740 GTP-binding protein 0.47 AO353_17155 RNA polymerase-associated protein RapA low > 101
Pseudomonas fluorescens GW456-L13 0.72 PfGW456L13_1574 GTP-binding and nucleic acid-binding protein YchF 0.47 PfGW456L13_4599 RNA polymerase associated protein RapA (EC 3.6.1.-) low > 87
Pseudomonas fluorescens FW300-N1B4 0.72 Pf1N1B4_2912 GTP-binding and nucleic acid-binding protein YchF 0.47 Pf1N1B4_3224 RNA polymerase associated protein RapA (EC 3.6.1.-) low > 87
Pseudomonas fluorescens FW300-N2C3 0.71 AO356_16450 GTP-binding protein 0.47 AO356_04975 RNA polymerase-associated protein RapA low > 104
Pseudomonas syringae pv. syringae B728a ΔmexB 0.71 Psyr_0941 Conserved hypothetical protein 92 0.47 Psyr_3842 SNF2-related:Helicase, C-terminal:Type III restriction enzyme, res subunit low > 86
Dyella japonica UNC79MFTsu3.2 0.71 ABZR86_RS22010 redox-regulated ATPase YchF 0.32 ABZR86_RS09245 RNA polymerase-associated protein RapA low > 74
Pseudomonas syringae pv. syringae B728a 0.71 Psyr_0941 Conserved hypothetical protein 92 0.47 Psyr_3842 SNF2-related:Helicase, C-terminal:Type III restriction enzyme, res subunit low > 86
Pseudomonas simiae WCS417 0.71 PS417_03560 GTP-binding protein 0.46 PS417_06645 RNA polymerase-associated protein RapA low > 88
Pseudomonas fluorescens SBW25 0.70 PFLU_RS03610 redox-regulated ATPase YchF 0.47 PFLU_RS06675 RNA polymerase-associated protein RapA low > 109
Pseudomonas fluorescens SBW25-INTG 0.70 PFLU_RS03610 redox-regulated ATPase YchF 0.47 PFLU_RS06675 RNA polymerase-associated protein RapA 0.36 48
Rhodanobacter denitrificans MT42 0.68 LRK55_RS03425 redox-regulated ATPase YchF 0.32 LRK55_RS02635 RNA polymerase-associated protein RapA low > 63
Rhodanobacter sp. FW510-T8 0.68 OKGIIK_10565 Ribosome-binding ATPase YchF 0.32 OKGIIK_09865 rapA RNA polymerase-associated protein RapA low > 52
Rhodanobacter denitrificans FW104-10B01 0.68 LRK54_RS03675 redox-regulated ATPase YchF 0.32 LRK54_RS02885 RNA polymerase-associated protein RapA low > 59

Not shown: 51 genomes with orthologs for IAI47_11310 only; 1 genomes with orthologs for IAI47_16055 only