Conservation of cofitness between IAI47_11310 and IAI47_06505 in Pantoea sp. MT58

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pantoea sp. MT58 1.0 IAI47_11310 redox-regulated ATPase YchF 1.0 IAI47_06505 type I secretion system permease/ATPase 0.35 17
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF2784 GTP-binding and nucleic acid-binding protein YchF 0.36 GFF4154 Type I secretion system ATPase, LssB family LapB low > 78
Dickeya dianthicola ME23 0.94 DZA65_RS11435 redox-regulated ATPase YchF 0.26 DZA65_RS16855 type I secretion system permease/ATPase low > 75
Dickeya dianthicola 67-19 0.94 HGI48_RS10975 redox-regulated ATPase YchF 0.25 HGI48_RS15775 type I secretion system permease/ATPase low > 71
Dickeya dadantii 3937 0.94 DDA3937_RS11035 redox-regulated ATPase YchF 0.24 DDA3937_RS15690 type I secretion system permease/ATPase low > 74
Escherichia coli ECRC101 0.93 OKFHMN_28410 ychF redox-regulated ATPase YchF 0.44 OKFHMN_08045 sunT type I secretion system permease/ATPase
Escherichia coli ECRC99 0.93 KEDOAH_25405 ychF redox-regulated ATPase YchF 0.44 KEDOAH_19925 sunT type I secretion system permease/ATPase
Escherichia coli ECOR38 0.93 HEPCGN_24875 ychF redox-regulated ATPase YchF 0.44 HEPCGN_06680 sunT type I secretion system permease/ATPase
Escherichia coli ECRC101 0.93 MCAODC_21850 ychF redox-regulated ATPase YchF 0.43 MCAODC_27260 sunT type I secretion system permease/ATPase
Escherichia coli ECRC98 0.93 JDDGAC_06165 ychF redox-regulated ATPase YchF 0.44 JDDGAC_11690 sunT type I secretion system permease/ATPase
Escherichia coli ECRC102 0.93 NIAGMN_27825 ychF redox-regulated ATPase YchF 0.44 NIAGMN_06095 sunT type I secretion system permease/ATPase
Escherichia coli Nissle 1917 0.93 ECOLIN_RS07280 redox-regulated ATPase YchF 0.28 ECOLIN_RS01690 type I secretion system permease/ATPase
Pectobacterium carotovorum WPP14 0.93 HER17_RS10445 redox-regulated ATPase YchF 0.73 HER17_RS16120 type I secretion system permease/ATPase low > 75
Rahnella sp. WP5 0.90 EX31_RS07380 redox-regulated ATPase YchF 0.75 EX31_RS19260 type I secretion system permease/ATPase low > 89
Enterobacter asburiae PDN3 0.89 EX28DRAFT_0821 GTP-binding protein YchF 0.43 EX28DRAFT_1344 type I secretion system ATPase, LssB family
Enterobacter sp. TBS_079 0.89 MPMX20_02645 Ribosome-binding ATPase YchF 0.43 MPMX20_02201 Toxin RTX-I translocation ATP-binding protein low > 85
Klebsiella michiganensis M5al 0.89 BWI76_RS17485 GTP-binding protein YchF 0.35 BWI76_RS10020 ABC transporter
Shewanella amazonensis SB2B 0.81 Sama_2571 GTP-dependent nucleic acid-binding protein EngD (RefSeq) 0.27 Sama_3259 toxin secretion ATP-binding protein (RefSeq) low > 62
Shewanella oneidensis MR-1 0.80 SO1185 conserved hypothetical protein TIGR00092 (NCBI ptt file) 0.27 SO4318 rtxB toxin secretion ATP-binding protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.80 Shewana3_1012 GTP-dependent nucleic acid-binding protein EngD (RefSeq) 0.27 Shewana3_0381 ABC transporter related (RefSeq) low > 73
Shewanella loihica PV-4 0.78 Shew_2919 translation-associated GTPase (RefSeq) 0.26 Shew_0312 ABC transporter-related protein (RefSeq) low > 60
Vibrio cholerae E7946 ATCC 55056 0.74 CSW01_10875 redox-regulated ATPase YchF 0.30 CSW01_19495 type I secretion system permease/ATPase low > 62
Pseudomonas putida KT2440 0.73 PP_0719 ribosome-associated potassium-dependent informational ATP/GTPase 0.38 PP_0804 Protein secretion ABC efflux system, permease and ATP-binding protein low > 96
Acinetobacter radioresistens SK82 0.72 MPMX26_01861 Ribosome-binding ATPase YchF 0.43 MPMX26_01962 Leukotoxin export ATP-binding protein LtxB
Pseudomonas sp. RS175 0.72 PFR28_03664 Ribosome-binding ATPase YchF 0.26 PFR28_04787 Leukotoxin export ATP-binding protein LtxB low > 88
Pseudomonas fluorescens FW300-N2E3 0.72 AO353_14740 GTP-binding protein 0.26 AO353_11190 ABC transporter low > 101
Pseudomonas fluorescens FW300-N1B4 0.72 Pf1N1B4_2912 GTP-binding and nucleic acid-binding protein YchF 0.28 Pf1N1B4_521 ABC transporter, transmembrane region:ABC transporter:Peptidase C39, bacteriocin processing low > 87
Pseudomonas fluorescens GW456-L13 0.72 PfGW456L13_1574 GTP-binding and nucleic acid-binding protein YchF 0.26 PfGW456L13_4431 ABC transporter, transmembrane region:ABC transporter:Peptidase C39, bacteriocin processing low > 87
Pseudomonas fluorescens FW300-N2C3 0.71 AO356_16450 GTP-binding protein 0.26 AO356_10560 ABC transporter low > 104
Paraburkholderia graminis OAS925 0.71 ABIE53_003650 GTP-binding protein YchF 0.19 ABIE53_004977 subfamily B ATP-binding cassette protein HlyB/CyaB low > 113
Ralstonia solanacearum IBSBF1503 0.70 RALBFv3_RS06570 redox-regulated ATPase YchF 0.20 RALBFv3_RS20760 type I secretion system permease/ATPase low > 76
Ralstonia solanacearum UW163 0.70 UW163_RS07055 redox-regulated ATPase YchF 0.19 UW163_RS22515 type I secretion system permease/ATPase
Ralstonia solanacearum PSI07 0.69 RPSI07_RS10660 redox-regulated ATPase YchF 0.18 RPSI07_RS01230 type I secretion system permease/ATPase low > 81
Variovorax sp. SCN45 0.69 GFF2141 GTP-binding and nucleic acid-binding protein YchF 0.46 GFF5853 Type I secretion system ATPase, LssB family LapB low > 127
Rhodanobacter sp. FW510-T8 0.68 OKGIIK_10565 Ribosome-binding ATPase YchF 0.19 OKGIIK_05220 Peptidase C39 low > 52
Acidovorax sp. GW101-3H11 0.65 Ac3H11_4001 GTP-binding and nucleic acid-binding protein YchF 0.30 Ac3H11_2111 Type I secretion system ATPase, LssB family LapB
Dinoroseobacter shibae DFL-12 0.58 Dshi_0954 GTP-binding protein YchF (RefSeq) 0.24 Dshi_2501 ABC transporter related (RefSeq)
Rhizobium sp. OAE497 0.56 ABIE40_RS13100 redox-regulated ATPase YchF 0.38 ABIE40_RS24895 type I secretion system permease/ATPase
Sphingomonas koreensis DSMZ 15582 0.56 Ga0059261_3227 GTP-binding protein YchF 0.38 Ga0059261_0543 type I secretion system ATPase, LssB family low > 68
Desulfovibrio vulgaris Hildenborough JW710 0.53 DVU1429 GTP-binding protein (TIGR) 0.30 DVU1017 rtxB ABC transporter, ATP-binding protein/permease protein (TIGR) low > 55
Desulfovibrio vulgaris Miyazaki F 0.51 DvMF_0234 GTP-dependent nucleic acid-binding protein EngD (RefSeq) 0.29 DvMF_1160 cyclic nucleotide-binding protein (RefSeq) low > 51

Not shown: 60 genomes with orthologs for IAI47_11310 only; 1 genomes with orthologs for IAI47_06505 only