Conservation of cofitness between HSERO_RS23825 and HSERO_RS19450 in Herbaspirillum seropedicae SmR1

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS23825 hypothetical protein 1.0 HSERO_RS19450 indole-3-glycerol-phosphate synthase 0.48 6
Burkholderia phytofirmans PsJN 0.29 BPHYT_RS19575 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC 0.55 BPHYT_RS17405 indole-3-glycerol phosphate synthase low > 109
Paraburkholderia graminis OAS925 0.28 ABIE53_000291 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein 0.56 ABIE53_003643 indole-3-glycerol phosphate synthase — —
Paraburkholderia bryophila 376MFSha3.1 0.27 H281DRAFT_02360 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein 0.55 H281DRAFT_05712 indole-3-glycerol phosphate synthase low > 103
Ralstonia sp. UNC404CL21Col 0.27 ABZR87_RS12805 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.67 ABZR87_RS02160 indole-3-glycerol phosphate synthase TrpC low > 80
Paraburkholderia sabiae LMG 24235 0.26 QEN71_RS29485 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.61 QEN71_RS27565 indole-3-glycerol phosphate synthase TrpC low > 153
Ralstonia solanacearum GMI1000 0.25 RS_RS08635 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.65 RS_RS14450 Indole-3-glycerol phosphate synthase 1 — —
Ralstonia solanacearum PSI07 0.25 RPSI07_RS16115 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.65 RPSI07_RS10735 indole-3-glycerol phosphate synthase TrpC — —
Ralstonia solanacearum IBSBF1503 0.24 RALBFv3_RS01360 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.66 RALBFv3_RS06505 indole-3-glycerol phosphate synthase TrpC — —
Ralstonia solanacearum UW163 0.24 UW163_RS14670 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.66 UW163_RS07120 indole-3-glycerol phosphate synthase TrpC — —
Dechlorosoma suillum PS 0.21 Dsui_2868 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain protein 0.56 Dsui_0168 Indole-3-glycerol phosphate synthase — —
Cupriavidus basilensis FW507-4G11 0.21 RR42_RS09010 FAD-dependent cmnm(5)s(2)U34 oxidoreductase 0.71 RR42_RS18310 indole-3-glycerol-phosphate synthase low > 128
Pseudomonas fluorescens FW300-N1B4 0.20 Pf1N1B4_373 5-methylaminomethyl-2-thiouridine-forming enzyme mnmC 0.50 Pf1N1B4_2549 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) low > 87
Pseudomonas fluorescens FW300-N2E3 0.19 AO353_02165 FAD-dependent cmnm(5)s(2)U34 oxidoreductase 0.50 AO353_07210 indole-3-glycerol-phosphate synthase low > 101
Pseudomonas stutzeri RCH2 0.19 Psest_1634 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 0.52 Psest_3647 Indole-3-glycerol phosphate synthase low > 67
Pseudomonas fluorescens GW456-L13 0.19 PfGW456L13_2155 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase 0.50 PfGW456L13_1222 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) low > 87
Pseudomonas sp. S08-1 0.19 OH686_20990 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase / FAD-dependent cmnm(5)s(2)U34 oxidoreductase 0.53 OH686_15140 Indole-3-glycerol phosphate synthase low > 80
Pseudomonas fluorescens FW300-N2C3 0.19 AO356_03570 FAD-dependent cmnm(5)s(2)U34 oxidoreductase 0.51 AO356_14440 indole-3-glycerol-phosphate synthase low > 104
Pseudomonas sp. RS175 0.18 PFR28_00884 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC 0.52 PFR28_04043 Indole-3-glycerol phosphate synthase — —
Pseudomonas fluorescens FW300-N2E2 0.18 Pf6N2E2_2541 5-methylaminomethyl-2-thiouridine-forming enzyme mnmC 0.52 Pf6N2E2_4826 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) low > 103
Pseudomonas syringae pv. syringae B728a 0.17 Psyr_3742 FAD dependent oxidoreductase:Protein of unknown function DUF752 0.50 Psyr_4579 indole-3-glycerol phosphate synthase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.17 Psyr_3742 FAD dependent oxidoreductase:Protein of unknown function DUF752 0.50 Psyr_4579 indole-3-glycerol phosphate synthase 0.37 32
Pseudomonas simiae WCS417 0.17 PS417_19225 FAD-dependent cmnm(5)s(2)U34 oxidoreductase 0.50 PS417_25710 indole-3-glycerol-phosphate synthase low > 88
Pseudomonas putida KT2440 0.17 PP_1751 methyltransferase/FAD-dependent oxidoreductase 0.49 PP_0422 Indole-3-glycerol phosphate synthase low > 96
Marinobacter adhaerens HP15 0.17 HP15_1540 protein YfcK 0.49 HP15_3291 indole-3-glycerol phosphate synthase low > 73
Pseudomonas fluorescens SBW25-INTG 0.16 PFLU_RS21190 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.49 PFLU_RS27365 indole-3-glycerol phosphate synthase TrpC low > 109
Pseudomonas fluorescens SBW25 0.16 PFLU_RS21190 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.49 PFLU_RS27365 indole-3-glycerol phosphate synthase TrpC low > 109
Acidovorax sp. GW101-3H11 0.14 Ac3H11_579 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase 0.65 Ac3H11_772 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) low > 79
Variovorax sp. SCN45 0.14 GFF1245 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase 0.60 GFF5890 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) — —
Castellaniella sp019104865 MT123 0.13 ABCV34_RS09580 FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.58 ABCV34_RS10310 indole-3-glycerol phosphate synthase TrpC — —
Variovorax sp. OAS795 0.12 ABID97_RS15455 FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.61 ABID97_RS05280 indole-3-glycerol phosphate synthase TrpC low > 91
Brevundimonas sp. GW460-12-10-14-LB2 0.11 A4249_RS15340 tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD 0.39 A4249_RS06175 indole-3-glycerol phosphate synthase TrpC — —
Acinetobacter radioresistens SK82 0.09 MPMX26_02642 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC 0.46 MPMX26_00983 Indole-3-glycerol phosphate synthase low > 36
Caulobacter crescentus NA1000 0.08 CCNA_00785 tRNA methyltransferase/FAD-dependent oxidoreductase MnmC 0.40 CCNA_01976 Indole-3-glycerol phosphate synthase low > 66
Caulobacter crescentus NA1000 Δfur 0.08 CCNA_00785 tRNA methyltransferase/FAD-dependent oxidoreductase MnmC 0.40 CCNA_01976 Indole-3-glycerol phosphate synthase low > 67

Not shown: 30 genomes with orthologs for HSERO_RS23825 only; 29 genomes with orthologs for HSERO_RS19450 only