Conservation of cofitness between HSERO_RS04345 and HSERO_RS04830 in Herbaspirillum seropedicae SmR1

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS04345 membrane protein 1.0 HSERO_RS04830 alcohol dehydrogenase 0.26 14
Paraburkholderia sabiae LMG 24235 0.64 QEN71_RS15210 NAD(P)/FAD-dependent oxidoreductase 0.27 QEN71_RS33145 alcohol dehydrogenase low > 153
Ralstonia solanacearum PSI07 0.63 RPSI07_RS13540 NAD(P)/FAD-dependent oxidoreductase 0.68 RPSI07_RS09450 alcohol dehydrogenase AdhP low > 81
Cupriavidus basilensis FW507-4G11 0.63 RR42_RS14990 membrane protein 0.68 RR42_RS34260 Alcohol dehydrogenase (EC 1.1.1.1) (from data) low > 128
Burkholderia phytofirmans PsJN 0.61 BPHYT_RS33560 membrane protein 0.28 BPHYT_RS28135 alcohol dehydrogenase 0.20 87
Ralstonia solanacearum UW163 0.61 UW163_RS09980 NAD(P)/FAD-dependent oxidoreductase 0.68 UW163_RS05800 alcohol dehydrogenase AdhP — —
Ralstonia solanacearum GMI1000 0.61 RS_RS11135 NAD(P)/FAD-dependent oxidoreductase 0.67 RS_RS15725 alcohol dehydrogenase AdhP low > 80
Ralstonia solanacearum IBSBF1503 0.61 RALBFv3_RS03690 NAD(P)/FAD-dependent oxidoreductase 0.68 RALBFv3_RS07825 alcohol dehydrogenase AdhP low > 76
Ralstonia sp. UNC404CL21Col 0.60 ABZR87_RS15620 NAD(P)/FAD-dependent oxidoreductase 0.69 ABZR87_RS03500 alcohol dehydrogenase AdhP low > 80
Castellaniella sp019104865 MT123 0.58 ABCV34_RS08895 NAD(P)/FAD-dependent oxidoreductase 0.69 ABCV34_RS02710 alcohol dehydrogenase AdhP low > 48
Variovorax sp. SCN45 0.57 GFF4713 Uncharacterized protein YhiN 0.23 GFF6951 Alcohol dehydrogenase (EC 1.1.1.1) low > 127
Sinorhizobium meliloti 1021 0.54 SMc00763 hypothetical protein 0.83 SMa1296 alcohol dehydrogenase low > 103
Rhizobium sp. OAE497 0.51 ABIE40_RS03215 NAD(P)/FAD-dependent oxidoreductase 0.22 ABIE40_RS22235 zinc-dependent alcohol dehydrogenase family protein low > 107
Agrobacterium fabrum C58 0.51 Atu0603 hypothetical protein 0.84 Atu0626 alcohol dehydrogenase low > 89
Rhodanobacter denitrificans MT42 0.50 LRK55_RS14395 NAD(P)/FAD-dependent oxidoreductase 0.20 LRK55_RS01085 zinc-dependent alcohol dehydrogenase family protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.50 LRK54_RS14680 NAD(P)/FAD-dependent oxidoreductase 0.20 LRK54_RS01320 zinc-dependent alcohol dehydrogenase family protein low > 59
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.48 GFF523 NAD(FAD)-utilizing dehydrogenases 0.35 GFF2557 Alcohol dehydrogenase (EC 1.1.1.1) low > 78
Dyella japonica UNC79MFTsu3.2 0.48 ABZR86_RS00415 NAD(P)/FAD-dependent oxidoreductase 0.67 ABZR86_RS04465 alcohol dehydrogenase AdhP low > 74
Serratia liquefaciens MT49 0.48 IAI46_24145 NAD(P)/FAD-dependent oxidoreductase 0.35 IAI46_12310 alcohol dehydrogenase AdhP low > 86
Erwinia tracheiphila SCR3 0.47 LU632_RS19445 NAD(P)/FAD-dependent oxidoreductase 0.36 LU632_RS00630 adhP alcohol dehydrogenase AdhP low > 74
Pseudomonas sp. RS175 0.47 PFR28_04173 hypothetical protein 0.22 PFR28_01972 putative alcohol dehydrogenase AdhA low > 88
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_2411 FIG00953568: hypothetical protein 0.22 Pf1N1B4_4176 Alcohol dehydrogenase (EC 1.1.1.1) low > 87
Pantoea sp. MT58 0.47 IAI47_01370 NAD(P)/FAD-dependent oxidoreductase 0.32 IAI47_08620 alcohol dehydrogenase AdhP low > 76
Pseudomonas fluorescens SBW25 0.46 PFLU_RS28025 NAD(P)/FAD-dependent oxidoreductase 0.22 PFLU_RS20115 zinc-dependent alcohol dehydrogenase family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS28025 NAD(P)/FAD-dependent oxidoreductase 0.22 PFLU_RS20115 zinc-dependent alcohol dehydrogenase family protein low > 109
Enterobacter asburiae PDN3 0.46 EX28DRAFT_4070 flavoprotein, HI0933 family 0.37 EX28DRAFT_1101 Zn-dependent alcohol dehydrogenases low > 76
Pseudomonas fluorescens FW300-N2E2 0.46 Pf6N2E2_4672 FIG00953568: hypothetical protein 0.23 Pf6N2E2_1522 Alcohol dehydrogenase (EC 1.1.1.1) low > 103
Escherichia coli Nissle 1917 0.46 ECOLIN_RS19955 NAD(P)/FAD-dependent oxidoreductase 0.36 ECOLIN_RS08520 alcohol dehydrogenase AdhP low > 55
Pseudomonas fluorescens FW300-N2E3 0.46 AO353_07855 hypothetical protein 0.24 AO353_19865 alcohol dehydrogenase low > 101
Escherichia coli ECRC62 0.46 BNILDI_03180 yhiN Uncharacterized protein YhiN 0.36 BNILDI_17525 adhP alcohol dehydrogenase AdhP low > 75
Escherichia coli BL21 0.46 ECD_03341 putative oxidoreductase 0.36 ECD_01436 ethanol-active dehydrogenase/acetaldehyde-active reductase — —
Enterobacter sp. TBS_079 0.46 MPMX20_04392 hypothetical protein 0.37 MPMX20_02371 Alcohol dehydrogenase, propanol-preferring low > 85
Escherichia coli ECOR27 0.46 NOLOHH_08380 yhiN Uncharacterized protein YhiN 0.36 NOLOHH_19040 adhP alcohol dehydrogenase AdhP low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.46 OHPLBJKB_00211 hypothetical protein 0.36 OHPLBJKB_02239 Alcohol dehydrogenase, propanol-preferring low > 73
Escherichia coli BW25113 0.46 b3492 yhiN predicted oxidoreductase with FAD/NAD(P)-binding domain (NCBI) 0.36 b1478 adhP alcohol dehydrogenase (VIMSS) low > 76
Escherichia coli ECOR38 0.46 HEPCGN_15360 yhiN Uncharacterized protein YhiN 0.36 HEPCGN_26430 adhP alcohol dehydrogenase AdhP low > 87
Escherichia coli ECRC98 0.46 JDDGAC_20075 yhiN Uncharacterized protein YhiN 0.36 JDDGAC_03855 adhP alcohol dehydrogenase AdhP low > 86
Escherichia coli ECRC102 0.46 NIAGMN_14210 yhiN Uncharacterized protein YhiN 0.36 NIAGMN_25495 adhP alcohol dehydrogenase AdhP — —
Escherichia fergusonii Becca 0.46 EFB2_00323 hypothetical protein 0.36 EFB2_02513 Alcohol dehydrogenase, propanol-preferring low > 86
Escherichia coli ECRC99 0.46 KEDOAH_11700 yhiN Uncharacterized protein YhiN 0.36 KEDOAH_27075 adhP alcohol dehydrogenase AdhP — —
Escherichia coli ECRC100 0.46 OKFHMN_16445 yhiN Uncharacterized protein YhiN 0.36 OKFHMN_01365 adhP alcohol dehydrogenase AdhP low > 80
Escherichia coli ECRC101 0.46 MCAODC_06960 yhiN Uncharacterized protein YhiN 0.36 MCAODC_16575 adhP alcohol dehydrogenase AdhP low > 87
Klebsiella michiganensis M5al 0.45 BWI76_RS26565 membrane protein 0.35 BWI76_RS13800 zinc-dependent alcohol dehydrogenase low > 92
Pseudomonas putida KT2440 0.44 PP_4953 putative oxidoreductase with FAD/NAD(P)-binding domain 0.35 PP_3839 short-chain alcohol dehydrogenase low > 96
Dinoroseobacter shibae DFL-12 0.43 Dshi_2710 HI0933 family protein (RefSeq) 0.63 Dshi_0931 Alcohol dehydrogenase GroES domain protein (RefSeq) low > 64
Echinicola vietnamensis KMM 6221, DSM 17526 0.13 Echvi_3335 flavoprotein, HI0933 family 0.65 Echvi_3219 Zn-dependent alcohol dehydrogenases low > 79

Not shown: 41 genomes with orthologs for HSERO_RS04345 only; 5 genomes with orthologs for HSERO_RS04830 only