Conservation of cofitness between HSERO_RS08195 and HSERO_RS04220 in Herbaspirillum seropedicae SmR1

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS08195 ABC transporter substrate-binding protein 1.0 HSERO_RS04220 epoxyqueuosine reductase 0.26 9
Burkholderia phytofirmans PsJN 0.67 BPHYT_RS34705 ABC transporter substrate-binding protein 0.63 BPHYT_RS15960 iron-sulfur cluster binding protein low > 109
Paraburkholderia sabiae LMG 24235 0.66 QEN71_RS16490 sulfonate ABC transporter substrate-binding protein 0.65 QEN71_RS02745 tRNA epoxyqueuosine(34) reductase QueG low > 153
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS28835 sulfonate ABC transporter substrate-binding protein 0.57 PFLU_RS02540 tRNA epoxyqueuosine(34) reductase QueG low > 109
Pseudomonas fluorescens SBW25 0.55 PFLU_RS28835 sulfonate ABC transporter substrate-binding protein 0.57 PFLU_RS02540 tRNA epoxyqueuosine(34) reductase QueG low > 109
Pseudomonas simiae WCS417 0.55 PS417_27170 ABC transporter substrate-binding protein 0.57 PS417_02460 epoxyqueuosine reductase low > 88
Pseudomonas sp. S08-1 0.54 OH686_11575 Alkanesulfonate ABC transporter substrate-binding protein SsuA 0.59 OH686_09500 epoxyqueuosine reductase low > 80
Pseudomonas fluorescens FW300-N2E3 0.54 AO353_08665 ABC transporter substrate-binding protein 0.57 AO353_13115 epoxyqueuosine reductase low > 101
Hydrogenophaga sp. GW460-11-11-14-LB1 0.54 GFF5029 Alkanesulfonates-binding protein 0.61 GFF5474 Epoxyqueuosine (oQ) reductase QueG low > 90
Pseudomonas stutzeri RCH2 0.53 Psest_4055 ABC transporter, substrate-binding protein, aliphatic sulfonates family 0.55 Psest_0677 iron-sulfur cluster binding protein, putative low > 67
Pseudomonas syringae pv. syringae B728a ΔmexB 0.53 Psyr_4876 ABC transporter, substrate-binding protein, aliphatic sulfonate 0.59 Psyr_0566 4Fe-4S cluster binding protein low > 86
Pseudomonas syringae pv. syringae B728a 0.53 Psyr_4876 ABC transporter, substrate-binding protein, aliphatic sulfonate 0.59 Psyr_0566 4Fe-4S cluster binding protein low > 86
Pseudomonas sp. RS175 0.52 PFR28_04304 Putative aliphatic sulfonates-binding protein 0.57 PFR28_05115 Epoxyqueuosine reductase low > 88
Pseudomonas fluorescens FW300-N1B4 0.52 Pf1N1B4_2248 Alkanesulfonates-binding protein 0.57 Pf1N1B4_1418 Epoxyqueuosine (oQ) reductase QueG low > 87
Pseudomonas fluorescens GW456-L13 0.52 PfGW456L13_919 Alkanesulfonates-binding protein 0.57 PfGW456L13_160 Epoxyqueuosine (oQ) reductase QueG 0.27 66
Pseudomonas fluorescens FW300-N2E2 0.51 Pf6N2E2_4503 Alkanesulfonates-binding protein 0.56 Pf6N2E2_3620 Epoxyqueuosine (oQ) reductase QueG low > 103
Ralstonia sp. UNC404CL21Col 0.51 ABZR87_RS11500 sulfonate ABC transporter substrate-binding protein 0.63 ABZR87_RS00775 tRNA epoxyqueuosine(34) reductase QueG low > 80
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_13105 ABC transporter substrate-binding protein 0.57 AO356_08685 epoxyqueuosine reductase low > 104
Pseudomonas putida KT2440 0.50 PP_0237 aliphatic sulfonate ABC transporter - periplasmic binding protein / transport of isethionate 0.55 PP_4900 epoxyqueuosine reductase low > 96
Ralstonia solanacearum IBSBF1503 0.48 RALBFv3_RS00045 sulfonate ABC transporter substrate-binding protein 0.62 RALBFv3_RS05120 tRNA epoxyqueuosine(34) reductase QueG low > 76
Ralstonia solanacearum UW163 0.48 UW163_RS13375 sulfonate ABC transporter substrate-binding protein 0.62 UW163_RS08505 tRNA epoxyqueuosine(34) reductase QueG
Paraburkholderia graminis OAS925 0.47 ABIE53_001849 sulfonate transport system substrate-binding protein 0.64 ABIE53_003363 epoxyqueuosine reductase low > 113
Acinetobacter radioresistens SK82 0.47 MPMX26_00028 Putative aliphatic sulfonates-binding protein 0.48 MPMX26_01783 Epoxyqueuosine reductase
Rhizobium sp. OAE497 0.45 ABIE40_RS25420 sulfonate ABC transporter substrate-binding protein 0.34 ABIE40_RS01310 tRNA epoxyqueuosine(34) reductase QueG low > 107
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS32605 sulfonate ABC transporter substrate-binding protein 0.63 RR42_RS03405 epoxyqueuosine reductase low > 128
Escherichia coli ECOR27 0.41 NOLOHH_21895 ssuA aliphatic sulfonate ABC transporter substrate-binding protein SsuA 0.55 NOLOHH_04550 queG tRNA epoxyqueuosine(34) reductase QueG low > 75
Escherichia coli BL21 0.41 ECD_00940 aliphatic sulfonate ABC transporter periplasmic binding protein 0.55 ECD_04033 epoxyqueuosine reductase, cobalamine-stimulated; queosine biosynthesis low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.41 OHPLBJKB_02730 Putative aliphatic sulfonates-binding protein 0.55 OHPLBJKB_03876 Epoxyqueuosine reductase low > 73
Escherichia coli BW25113 0.41 b0936 ycbO orf, hypothetical protein (VIMSS) 0.55 b4166 yjeS predicted Fe-S electron transport protein (NCBI) low > 76
Escherichia coli Nissle 1917 0.41 ECOLIN_RS04955 aliphatic sulfonate ABC transporter substrate-binding protein SsuA 0.55 ECOLIN_RS24200 tRNA epoxyqueuosine(34) reductase QueG
Escherichia fergusonii Becca 0.41 EFB2_03128 Putative aliphatic sulfonates-binding protein 0.55 EFB2_04369 Epoxyqueuosine reductase low > 86
Ralstonia solanacearum PSI07 0.41 RPSI07_RS06130 sulfonate ABC transporter substrate-binding protein 0.63 RPSI07_RS12175 tRNA epoxyqueuosine(34) reductase QueG low > 81
Escherichia coli ECOR38 0.41 HEPCGN_23180 ssuA aliphatic sulfonate ABC transporter substrate-binding protein SsuA 0.55 HEPCGN_10515 queG tRNA epoxyqueuosine(34) reductase QueG low > 87
Escherichia coli ECRC62 0.41 BNILDI_20150 ssuA aliphatic sulfonate ABC transporter substrate-binding protein SsuA 0.55 BNILDI_06940 queG tRNA epoxyqueuosine(34) reductase QueG low > 75
Escherichia coli ECRC99 0.40 KEDOAH_22390 ssuA aliphatic sulfonate ABC transporter substrate-binding protein SsuA 0.55 KEDOAH_15870 queG tRNA epoxyqueuosine(34) reductase QueG
Escherichia coli ECRC102 0.40 NIAGMN_03065 ssuA aliphatic sulfonate ABC transporter substrate-binding protein SsuA 0.55 NIAGMN_10135 queG tRNA epoxyqueuosine(34) reductase QueG
Escherichia coli ECRC98 0.40 JDDGAC_08955 ssuA aliphatic sulfonate ABC transporter substrate-binding protein SsuA 0.55 JDDGAC_15925 queG tRNA epoxyqueuosine(34) reductase QueG low > 86
Escherichia coli ECRC100 0.40 OKFHMN_05345 ssuA aliphatic sulfonate ABC transporter substrate-binding protein SsuA 0.55 OKFHMN_12285 queG tRNA epoxyqueuosine(34) reductase QueG low > 80
Escherichia coli ECRC101 0.40 MCAODC_24735 ssuA aliphatic sulfonate ABC transporter substrate-binding protein SsuA 0.55 MCAODC_02800 queG tRNA epoxyqueuosine(34) reductase QueG low > 87
Serratia liquefaciens MT49 0.40 IAI46_08795 sulfonate ABC transporter substrate-binding protein 0.55 IAI46_01595 tRNA epoxyqueuosine(34) reductase QueG low > 86
Enterobacter asburiae PDN3 0.40 EX28DRAFT_2000 ABC transporter, substrate-binding protein, aliphatic sulfonates family 0.53 EX28DRAFT_3363 epoxyqueuosine reductase low > 76
Ralstonia solanacearum GMI1000 0.39 RS_RS23795 sulfonate ABC transporter substrate-binding protein 0.63 RS_RS12740 tRNA epoxyqueuosine(34) reductase QueG low > 80
Pantoea sp. MT58 0.39 IAI47_21580 sulfonate ABC transporter substrate-binding protein 0.52 IAI47_02560 tRNA epoxyqueuosine(34) reductase QueG low > 76
Dickeya dadantii 3937 0.39 DDA3937_RS12865 sulfonate ABC transporter substrate-binding protein 0.55 DDA3937_RS18645 tRNA epoxyqueuosine(34) reductase QueG low > 74
Rahnella sp. WP5 0.39 EX31_RS18105 sulfonate ABC transporter substrate-binding protein 0.52 EX31_RS08850 tRNA epoxyqueuosine(34) reductase QueG low > 89
Enterobacter sp. TBS_079 0.38 MPMX20_01594 Putative aliphatic sulfonates-binding protein 0.53 MPMX20_00447 Epoxyqueuosine reductase low > 85
Pectobacterium carotovorum WPP14 0.38 HER17_RS00145 sulfonate ABC transporter substrate-binding protein 0.54 HER17_RS02555 tRNA epoxyqueuosine(34) reductase QueG low > 75
Dickeya dianthicola ME23 0.38 DZA65_RS13400 sulfonate ABC transporter substrate-binding protein 0.55 DZA65_RS19710 tRNA epoxyqueuosine(34) reductase QueG low > 75
Rhodopseudomonas palustris CGA009 0.38 TX73_013505 aliphatic sulfonate ABC transporter substrate-binding protein 0.31 TX73_000215 tRNA epoxyqueuosine(34) reductase QueG low > 86
Dickeya dianthicola 67-19 0.38 HGI48_RS12935 sulfonate ABC transporter substrate-binding protein 0.55 HGI48_RS18575 tRNA epoxyqueuosine(34) reductase QueG low > 71
Klebsiella michiganensis M5al 0.37 BWI76_RS22885 aliphatic sulfonate ABC transporter substrate-binding protein 0.54 BWI76_RS02505 tRNA epoxyqueuosine(34) reductase QueG low > 92
Agrobacterium fabrum C58 0.34 Atu1884 ABC transporter, substrate binding protein (aliphatic sulfonate) 0.32 Atu0292 iron-sulfur cluster binding protein low > 89

Not shown: 1 genomes with orthologs for HSERO_RS08195 only; 37 genomes with orthologs for HSERO_RS04220 only