Conservation of cofitness between HSERO_RS00235 and HSERO_RS02620 in Herbaspirillum seropedicae SmR1

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS00235 MFS transporter 1.0 HSERO_RS02620 cobalt transporter 0.42 7
Pseudomonas fluorescens GW456-L13 0.40 PfGW456L13_256 Permeases of the major facilitator superfamily 0.17 PfGW456L13_1393 Cobalt-zinc-cadmium resistance protein low > 87
Escherichia coli ECOR27 0.40 NOLOHH_18235 araJ MFS transporter 0.17 NOLOHH_05970 fieF CDF family cation-efflux transporter FieF low > 75
Escherichia coli ECRC98 0.40 JDDGAC_02320 ynfM Inner membrane transport protein YnfM 0.17 JDDGAC_17460 fieF CDF family cation-efflux transporter FieF low > 86
Escherichia coli ECRC62 0.40 BNILDI_17025 ynfM Inner membrane transport protein YnfM 0.17 BNILDI_05555 fieF CDF family cation-efflux transporter FieF 0.59 9
Escherichia coli ECRC102 0.40 NIAGMN_00345 ynfM Inner membrane transport protein YnfM 0.17 NIAGMN_11590 fieF CDF family cation-efflux transporter FieF — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.40 OHPLBJKB_02130 Inner membrane transport protein YnfM 0.17 OHPLBJKB_04136 Ferrous-iron efflux pump FieF low > 73
Escherichia coli ECRC101 0.40 MCAODC_17680 ynfM Inner membrane transport protein YnfM 0.17 MCAODC_04335 fieF CDF family cation-efflux transporter FieF low > 87
Escherichia coli ECOR38 0.40 HEPCGN_06105 ynfM Inner membrane transport protein YnfM 0.17 HEPCGN_12480 fieF CDF family cation-efflux transporter FieF low > 87
Escherichia coli ECRC100 0.40 OKFHMN_27730 ynfM Inner membrane transport protein YnfM 0.17 OKFHMN_13835 fieF CDF family cation-efflux transporter FieF low > 80
Escherichia coli BW25113 0.40 b1596 ynfM predicted transporter (NCBI) 0.17 b3915 fieF ferrous iron efflux protein F (NCBI) low > 76
Escherichia coli BL21 0.40 ECD_01565 putative arabinose efflux transporter 0.17 ECD_03800 ferrous iron and zinc transporter low > 61
Pseudomonas simiae WCS417 0.40 PS417_02015 membrane protein 0.18 PS417_24560 ferrous iron transporter low > 88
Escherichia coli ECRC99 0.40 KEDOAH_00375 araJ MFS transporter 0.17 KEDOAH_14320 fieF CDF family cation-efflux transporter FieF — —
Escherichia fergusonii Becca 0.40 EFB2_02396 Inner membrane transport protein YnfM 0.17 EFB2_04703 Ferrous-iron efflux pump FieF low > 86
Escherichia coli Nissle 1917 0.40 ECOLIN_RS08915 MFS transporter 0.17 ECOLIN_RS22550 CDF family cation-efflux transporter FieF low > 55
Enterobacter sp. TBS_079 0.40 MPMX20_02061 Inner membrane transport protein YnfM 0.17 MPMX20_04553 Ferrous-iron efflux pump FieF low > 85
Pseudomonas fluorescens SBW25-INTG 0.40 PFLU_RS02060 MFS transporter 0.18 PFLU_RS26490 cation diffusion facilitator family transporter low > 109
Pseudomonas fluorescens SBW25 0.40 PFLU_RS02060 MFS transporter 0.18 PFLU_RS26490 cation diffusion facilitator family transporter low > 109
Pseudomonas putida KT2440 0.39 PP_5072 efflux transporter 0.17 PP_4774 divalent cation efflux transporter low > 96
Serratia liquefaciens MT49 0.39 IAI46_11675 MFS transporter 0.19 IAI46_24650 CDF family cation-efflux transporter FieF low > 86
Pseudomonas fluorescens FW300-N2E3 0.39 AO353_12595 hypothetical protein 0.17 AO353_06310 ferrous iron transporter low > 101
Klebsiella michiganensis M5al 0.39 BWI76_RS15965 MFS transporter 0.59 BWI76_RS13865 cation diffusion facilitator family transporter low > 92
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_09295 hypothetical protein 0.17 AO356_15475 ferrous iron transporter low > 104
Pseudomonas fluorescens FW300-N2E2 0.39 Pf6N2E2_3736 Permeases of the major facilitator superfamily 0.17 Pf6N2E2_5036 Cobalt-zinc-cadmium resistance protein low > 103
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_1531 Permeases of the major facilitator superfamily 0.18 Pf1N1B4_2726 Cobalt-zinc-cadmium resistance protein low > 87
Pectobacterium carotovorum WPP14 0.38 HER17_RS10745 MFS transporter 0.19 HER17_RS00720 CDF family cation-efflux transporter FieF low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.38 GFF1787 Permeases of the major facilitator superfamily 0.17 GFF2282 Cobalt-zinc-cadmium resistance protein low > 78
Pseudomonas sp. RS175 0.38 PFR28_05018 Inner membrane transport protein YnfM 0.17 PFR28_03835 Ferrous-iron efflux pump FieF low > 88
Rahnella sp. WP5 0.38 EX31_RS16995 MFS transporter 0.20 EX31_RS10790 cation diffusion facilitator family transporter low > 89
Pantoea sp. MT58 0.38 IAI47_09740 MFS transporter 0.18 IAI47_00775 CDF family cation-efflux transporter FieF low > 76
Enterobacter asburiae PDN3 0.37 EX28DRAFT_1495 Arabinose efflux permease 0.53 EX28DRAFT_3666 cation diffusion facilitator family transporter low > 76
Pseudomonas syringae pv. syringae B728a 0.36 Psyr_0420 General substrate transporter:Major facilitator superfamily 0.17 Psyr_4333 Cation efflux protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.36 Psyr_0420 General substrate transporter:Major facilitator superfamily 0.17 Psyr_4333 Cation efflux protein low > 86
Pseudomonas stutzeri RCH2 0.35 Psest_3708 Arabinose efflux permease 0.17 Psest_0573 cation diffusion facilitator family transporter low > 67
Azospirillum sp. SherDot2 0.35 MPMX19_01172 Inner membrane transport protein YnfM 0.18 MPMX19_00714 Ferrous-iron efflux pump FieF low > 112
Dickeya dadantii 3937 0.35 DDA3937_RS10665 MFS transporter 0.19 DDA3937_RS00840 CDF family cation-efflux transporter FieF low > 74
Dickeya dianthicola 67-19 0.34 HGI48_RS10665 MFS transporter 0.18 HGI48_RS20535 CDF family cation-efflux transporter FieF low > 71
Dickeya dianthicola ME23 0.34 DZA65_RS11135 MFS transporter 0.18 DZA65_RS21580 CDF family cation-efflux transporter FieF low > 75
Dechlorosoma suillum PS 0.30 Dsui_2798 arabinose efflux permease family protein 0.16 Dsui_0813 cation diffusion facilitator family transporter low > 51
Vibrio cholerae E7946 ATCC 55056 0.22 CSW01_08135 MFS transporter 0.15 CSW01_13580 cation-efflux pump FieF low > 62
Shewanella loihica PV-4 0.21 Shew_1441 major facilitator transporter (RefSeq) 0.17 Shew_3568 cation diffusion facilitator family transporter (RefSeq) low > 60
Shewanella oneidensis MR-1 0.18 SO1917 multidrug resistance protein, putative (NCBI ptt file) 0.18 SO4475 cation efflux family protein (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.18 Sama_2214 multidrug resistance protein, putative (RefSeq) 0.17 Sama_3430 cation efflux family protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.17 Shewana3_1692 Xaa-His dipeptidase (RefSeq) 0.18 Shewana3_0255 cation diffusion facilitator family transporter (RefSeq) low > 73
Castellaniella sp019104865 MT123 0.15 ABCV34_RS01130 MFS transporter 0.55 ABCV34_RS08935 cation diffusion facilitator family transporter 0.39 11

Not shown: 17 genomes with orthologs for HSERO_RS00235 only; 29 genomes with orthologs for HSERO_RS02620 only