Conservation of cofitness between HGI48_RS20250 and HGI48_RS14685 in Dickeya dianthicola 67-19

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola 67-19 1.0 HGI48_RS20250 peptidylprolyl isomerase 1.0 HGI48_RS14685 prepilin peptidase 0.41 19
Dickeya dadantii 3937 0.99 DDA3937_RS20110 peptidylprolyl isomerase 0.92 DDA3937_RS14750 prepilin peptidase low > 74
Dickeya dianthicola ME23 0.99 DZA65_RS21295 peptidyl-prolyl cis-trans isomerase 0.99 DZA65_RS15630 prepilin peptidase — —
Pectobacterium carotovorum WPP14 0.93 HER17_RS01115 peptidylprolyl isomerase 0.64 HER17_RS06740 A24 family peptidase low > 75
Pantoea sp. MT58 0.76 IAI47_18550 peptidylprolyl isomerase 0.23 IAI47_02105 prepilin peptidase low > 76
Escherichia coli ECRC62 0.72 BNILDI_04770 ppiC peptidylprolyl isomerase PpiC 0.31 BNILDI_00555 pppA prepilin peptidase PppA low > 75
Escherichia coli BL21 0.72 ECD_03653 peptidyl-prolyl cis-trans isomerase C (rotamase C) 0.31 ECD_02841 bifunctional prepilin leader peptidase/ methylase low > 61
Escherichia coli BW25113 0.72 b3775 ppiC peptidyl-prolyl cis-trans isomerase C (rotamase C) (NCBI) 0.31 b2972 b2972 putative peptidase (VIMSS) low > 76
Escherichia coli ECRC102 0.72 NIAGMN_12375 ppiC peptidylprolyl isomerase PpiC 0.46 NIAGMN_28555 pulO prepilin peptidase — —
Escherichia coli ECRC101 0.72 MCAODC_05125 ppiC peptidylprolyl isomerase PpiC 0.46 MCAODC_15315 pulO prepilin peptidase low > 87
Escherichia coli Nissle 1917 0.72 ECOLIN_RS21685 peptidylprolyl isomerase PpiC 0.31 ECOLIN_RS17100 prepilin peptidase PppA — —
Escherichia coli ECRC100 0.72 OKFHMN_14620 ppiC peptidylprolyl isomerase PpiC 0.46 OKFHMN_00235 pulO prepilin peptidase low > 80
Escherichia coli ECOR27 0.72 NOLOHH_06755 ppiC peptidylprolyl isomerase PpiC 0.31 NOLOHH_10960 pppA prepilin peptidase PppA low > 75
Escherichia coli ECRC98 0.72 JDDGAC_18240 ppiC peptidylprolyl isomerase PpiC 0.46 JDDGAC_30345 pulO prepilin peptidase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.72 OHPLBJKB_04278 Peptidyl-prolyl cis-trans isomerase C 0.30 OHPLBJKB_00736 Leader peptidase PppA low > 73
Escherichia fergusonii Becca 0.72 EFB2_04861 Peptidyl-prolyl cis-trans isomerase C 0.31 EFB2_00842 Prepilin peptidase PppA low > 86
Klebsiella michiganensis M5al 0.71 BWI76_RS00995 peptidyl-prolyl cis-trans isomerase 0.51 BWI76_RS05035 prepilin peptidase — —
Enterobacter sp. TBS_079 0.70 MPMX20_04495 Peptidyl-prolyl cis-trans isomerase C 0.33 MPMX20_01525 Type 4 prepilin-like proteins leader peptide-processing enzyme low > 85
Enterobacter asburiae PDN3 0.70 EX28DRAFT_4447 PPIC-type PPIASE domain 0.33 EX28DRAFT_2069 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases low > 76
Rahnella sp. WP5 0.70 EX31_RS15025 peptidylprolyl isomerase PpiC 0.36 EX31_RS16215 prepilin peptidase low > 89
Escherichia coli ECOR38 0.67 HEPCGN_13330 ppiC peptidylprolyl isomerase PpiC 0.31 HEPCGN_18035 pppA prepilin peptidase PppA low > 87
Vibrio cholerae E7946 ATCC 55056 0.64 CSW01_18890 peptidyl-prolyl cis-trans isomerase 0.42 CSW01_12285 prepilin peptidase — —
Alteromonas macleodii MIT1002 0.64 MIT1002_03923 Peptidyl-prolyl cis-trans isomerase C 0.37 MIT1002_03011 Pectic enzymes secretion protein OutO — —
Shewanella loihica PV-4 0.62 Shew_3008 PpiC-type peptidyl-prolyl cis-trans isomerase (RefSeq) 0.36 Shew_3440 prepilin peptidase (RefSeq) low > 60
Shewanella sp. ANA-3 0.62 Shewana3_0624 PpiC-type peptidyl-prolyl cis-trans isomerase (RefSeq) 0.37 Shewana3_0417 type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A (RefSeq) low > 73
Kangiella aquimarina DSM 16071 0.60 B158DRAFT_0445 Parvulin-like peptidyl-prolyl isomerase 0.38 B158DRAFT_2140 type 4 prepilin peptidase 1 (EC:3.4.23.43). Aspartic peptidase. MEROPS family A24A — —
Shewanella oneidensis MR-1 0.60 SO0635 ppiC-1 peptidyl-prolyl cis-trans isomerase C (NCBI ptt file) 0.36 SO0414 pilD type 4 prepilin-like proteins leader peptide processing enzyme (NCBI ptt file) low > 76
Marinobacter adhaerens HP15 0.56 HP15_2629 PpiC-type peptidyl-prolyl cis-trans isomerase 0.36 HP15_2411 type IV pilus prepilin peptidase PilD low > 73
Desulfovibrio vulgaris Hildenborough JW710 0.53 DVU1470 ppiC peptidyl-prolyl cis-trans isomerase C (TIGR) 0.21 DVU1263 pppA type IV prepilin-like proteins leader peptidase (TIGR) low > 55
Desulfovibrio vulgaris Miyazaki F 0.52 DvMF_0310 PpiC-type peptidyl-prolyl cis-trans isomerase (RefSeq) 0.21 DvMF_1037 peptidase A24A domain protein (RefSeq) — —
Shewanella amazonensis SB2B 0.51 Sama_1666 cell wall hydrolase/autolysin (RefSeq) 0.35 Sama_0367 prepilin peptidase (RefSeq) — —
Pseudomonas putida KT2440 0.51 PP_3079 peptidyl-prolyl cis-trans isomerase C (rotamase C) 0.42 PP_0632 leader peptidase/N-methyltransferase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.51 Psyr_2901 PpiC-type peptidyl-prolyl cis-trans isomerase 0.39 Psyr_0796 type 4 prepilin peptidase 1, Aspartic peptidase, MEROPS family A24A low > 86
Pseudomonas sp. RS175 0.51 PFR28_01404 Peptidyl-prolyl cis-trans isomerase C 0.36 PFR28_03733 Type 4 prepilin-like proteins leader peptide-processing enzyme — —
Pseudomonas syringae pv. syringae B728a 0.51 Psyr_2901 PpiC-type peptidyl-prolyl cis-trans isomerase 0.39 Psyr_0796 type 4 prepilin peptidase 1, Aspartic peptidase, MEROPS family A24A — —
Pseudomonas fluorescens FW300-N2E2 0.51 Pf6N2E2_2029 Peptidyl-prolyl cis-trans isomerase PpiC (EC 5.2.1.8) 0.37 Pf6N2E2_5140 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) — —
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_00385 peptidylprolyl isomerase 0.37 AO356_16005 methyltransferase low > 104
Pseudomonas fluorescens FW300-N1B4 0.51 Pf1N1B4_5625 Peptidyl-prolyl cis-trans isomerase PpiC (EC 5.2.1.8) 0.38 Pf1N1B4_2840 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) — —
Pseudomonas fluorescens FW300-N2E3 0.51 AO353_21805 peptidylprolyl isomerase 0.40 AO353_14320 methyltransferase low > 101
Pseudomonas simiae WCS417 0.50 PS417_12185 peptidylprolyl isomerase 0.41 PS417_03895 methyltransferase — —
Pseudomonas fluorescens SBW25 0.50 PFLU_RS12875 peptidyl-prolyl cis-trans isomerase 0.41 PFLU_RS03940 prepilin peptidase — —
Pseudomonas fluorescens SBW25-INTG 0.50 PFLU_RS12875 peptidyl-prolyl cis-trans isomerase 0.41 PFLU_RS03940 prepilin peptidase — —
Pseudomonas fluorescens GW456-L13 0.50 PfGW456L13_2880 Peptidyl-prolyl cis-trans isomerase PpiC (EC 5.2.1.8) 0.42 PfGW456L13_1508 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) — —
Pseudomonas stutzeri RCH2 0.50 Psest_2778 Parvulin-like peptidyl-prolyl isomerase 0.37 Psest_3286 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases low > 67
Pseudomonas sp. S08-1 0.49 OH686_20205 Peptidyl-prolyl cis-trans isomerase PpiC 0.39 OH686_16495 Leader peptidase (Prepilin peptidase) / N-methyltransferase — —
Acinetobacter radioresistens SK82 0.45 MPMX26_02487 Peptidyl-prolyl cis-trans isomerase C 0.35 MPMX26_00244 Type 4 prepilin-like proteins leader peptide-processing enzyme low > 36

Not shown: 5 genomes with orthologs for HGI48_RS20250 only; 28 genomes with orthologs for HGI48_RS14685 only