Conservation of cofitness between HGI48_RS14455 and HGI48_RS06025 in Dickeya dianthicola 67-19

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola 67-19 1.0 HGI48_RS14455 transcriptional regulator TctD 1.0 HGI48_RS06025 TonB-dependent siderophore receptor 0.49 10
Dickeya dianthicola ME23 0.99 DZA65_RS15390 transcriptional regulator TctD 0.99 DZA65_RS06370 TonB-dependent siderophore receptor low > 75
Dickeya dadantii 3937 0.96 DDA3937_RS14485 transcriptional regulator TctD 0.92 DDA3937_RS05980 TonB-dependent receptor low > 74
Serratia liquefaciens MT49 0.74 IAI46_17870 transcriptional regulator TctD 0.70 IAI46_04645 TonB-dependent siderophore receptor low > 86
Klebsiella michiganensis M5al 0.71 BWI76_RS20030 DNA-binding response regulator 0.42 BWI76_RS16835 TonB-dependent siderophore receptor low > 92
Pantoea sp. MT58 0.71 IAI47_06215 transcriptional regulator TctD 0.30 IAI47_19415 TonB-dependent siderophore receptor low > 76
Enterobacter sp. TBS_079 0.70 MPMX20_03192 Transcriptional regulatory protein tctD 0.40 MPMX20_03876 Metal-pseudopaline receptor CntO low > 85
Pseudomonas stutzeri RCH2 0.56 Psest_0204 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 0.19 Psest_2116 TonB-dependent siderophore receptor low > 67
Pseudomonas fluorescens GW456-L13 0.55 PfGW456L13_4524 Tricarboxylate transport transcriptional regulator TctD 0.44 PfGW456L13_4949 Ferrichrome-iron receptor low > 87
Pseudomonas fluorescens FW300-N1B4 0.55 Pf1N1B4_3316 Tricarboxylate transport transcriptional regulator TctD 0.35 Pf1N1B4_5080 Ferrichrome-iron receptor low > 87
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_17590 transcriptional regulator 0.44 AO353_04880 TonB-dependent receptor low > 101
Pseudomonas fluorescens FW300-N2E2 0.55 Pf6N2E2_2765 Tricarboxylate transport transcriptional regulator TctD 0.35 Pf6N2E2_1291 Ferrichrome-iron receptor low > 103
Pseudomonas syringae pv. syringae B728a ΔmexB 0.54 Psyr_3965 Response regulator receiver:Transcriptional regulatory protein, C-terminal 0.36 Psyr_3345 TonB-dependent siderophore receptor low > 86
Pseudomonas syringae pv. syringae B728a 0.54 Psyr_3965 Response regulator receiver:Transcriptional regulatory protein, C-terminal 0.36 Psyr_3345 TonB-dependent siderophore receptor low > 86
Pseudomonas fluorescens FW300-N2C3 0.54 AO356_04610 transcriptional regulator 0.35 AO356_25695 ligand-gated channel low > 104
Pseudomonas sp. RS175 0.54 PFR28_00683 Transcriptional regulatory protein tctD 0.36 PFR28_01623 Metal-pseudopaline receptor CntO low > 88
Pseudomonas sp. S08-1 0.54 OH686_20005 Tricarboxylate transport transcriptional regulator TctD 0.18 OH686_07770 Ferrichrome-iron receptor low > 80
Pseudomonas simiae WCS417 0.53 PS417_07085 transcriptional regulator 0.44 PS417_05000 TonB-dependent receptor low > 88
Pseudomonas fluorescens SBW25 0.53 PFLU_RS07160 response regulator 0.44 PFLU_RS05070 TonB-dependent receptor low > 109
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS07160 response regulator 0.44 PFLU_RS05070 TonB-dependent receptor low > 109
Pseudomonas putida KT2440 0.53 PP_1420 Transcriptional regulatory protein tctD 0.44 PP_4606 putative Outer membrane ferric siderophore receptor low > 96
Ralstonia solanacearum PSI07 0.52 RPSI07_RS10475 DNA-binding response regulator 0.20 RPSI07_RS11535 TonB-dependent siderophore receptor — —
Herbaspirillum seropedicae SmR1 0.50 HSERO_RS22665 transcriptional regulator 0.19 HSERO_RS04745 ligand-gated channel protein low > 78
Ralstonia solanacearum UW163 0.50 UW163_RS06855 DNA-binding response regulator 0.20 UW163_RS07860 TonB-dependent siderophore receptor — —
Ralstonia solanacearum IBSBF1503 0.50 RALBFv3_RS06760 DNA-binding response regulator 0.20 RALBFv3_RS05765 TonB-dependent siderophore receptor low > 76
Paraburkholderia graminis OAS925 0.48 ABIE53_005556 two-component system response regulator TctD 0.33 ABIE53_001697 iron complex outermembrane receptor protein low > 113
Ralstonia solanacearum GMI1000 0.48 RS_RS14705 DNA-binding response regulator 0.19 RS_RS13655 TonB-dependent siderophore receptor — —
Acidovorax sp. GW101-3H11 0.48 Ac3H11_114 Tricarboxylate transport transcriptional regulator TctD 0.17 Ac3H11_2364 Ferrichrome-iron receptor low > 79
Paraburkholderia bryophila 376MFSha3.1 0.47 H281DRAFT_02602 DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain 0.33 H281DRAFT_04921 iron complex outermembrane recepter protein low > 103
Variovorax sp. SCN45 0.46 GFF581 Tricarboxylate transport transcriptional regulator TctD 0.41 GFF5286 Ferrichrome-iron receptor low > 127
Paraburkholderia sabiae LMG 24235 0.45 QEN71_RS15285 response regulator 0.41 QEN71_RS15145 TonB-dependent receptor low > 153
Hydrogenophaga sp. GW460-11-11-14-LB1 0.43 GFF3027 Tricarboxylate transport transcriptional regulator TctD 0.16 GFF5752 Ferrichrome-iron receptor low > 90
Xanthomonas campestris pv. campestris strain 8004 0.43 Xcc-8004.1026.1 Tricarboxylate transport transcriptional regulator TctD 0.16 Xcc-8004.4702.1 Ferrichrome-iron receptor low > 74
Dyella japonica UNC79MFTsu3.2 0.40 ABZR86_RS09380 response regulator transcription factor 0.10 ABZR86_RS04635 TonB-dependent receptor low > 74
Rhodanobacter denitrificans MT42 0.39 LRK55_RS02695 response regulator 0.15 LRK55_RS02190 TonB-dependent siderophore receptor low > 63
Rhodanobacter denitrificans FW104-10B01 0.38 LRK54_RS02945 response regulator 0.15 LRK54_RS02435 TonB-dependent siderophore receptor low > 59

Not shown: 9 genomes with orthologs for HGI48_RS14455 only; 24 genomes with orthologs for HGI48_RS06025 only