Conservation of cofitness between HER17_RS15875 and HER17_RS20000 in Pectobacterium carotovorum WPP14

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS15875 cytochrome o ubiquinol oxidase subunit II 1.0 HER17_RS20000 BolA family iron metabolism protein IbaG 0.75 11
Dickeya dadantii 3937 0.82 DDA3937_RS05615 cytochrome o ubiquinol oxidase subunit II 0.90 DDA3937_RS01590 BolA family iron metabolism protein IbaG low > 74
Dickeya dianthicola 67-19 0.82 HGI48_RS05660 cytochrome o ubiquinol oxidase subunit II 0.90 HGI48_RS01505 BolA family iron metabolism protein IbaG low > 71
Dickeya dianthicola ME23 0.81 DZA65_RS05985 cytochrome o ubiquinol oxidase subunit II 0.90 DZA65_RS01570 BolA family iron metabolism protein IbaG low > 75
Escherichia coli ECRC62 0.68 BNILDI_22710 cyoA cytochrome o ubiquinol oxidase subunit II 0.86 BNILDI_01735 ibaG BolA family iron metabolism protein IbaG low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.68 OHPLBJKB_03241 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.86 OHPLBJKB_00510 Acid stress protein IbaG 0.79 19
Escherichia coli ECOR27 0.68 NOLOHH_01295 cyoA cytochrome o ubiquinol oxidase subunit II 0.86 NOLOHH_09800 ibaG BolA family iron metabolism protein IbaG low > 75
Escherichia coli BL21 0.68 ECD_00383 cytochrome o ubiquinol oxidase subunit II 0.86 ECD_03055 acid stress protein; putative BolA family transcriptional regulator low > 61
Escherichia coli Nissle 1917 0.68 ECOLIN_RS02595 cytochrome o ubiquinol oxidase subunit II 0.86 ECOLIN_RS18365 BolA family iron metabolism protein IbaG 0.83 4
Escherichia coli BW25113 0.68 b0432 cyoA cytochrome o ubiquinol oxidase subunit II (NCBI) 0.86 b3190 yrbA orf, hypothetical protein (VIMSS) low > 76
Escherichia coli ECOR38 0.68 HEPCGN_06975 cyoA cytochrome o ubiquinol oxidase subunit II 0.86 HEPCGN_16875 ibaG BolA family iron metabolism protein IbaG low > 87
Escherichia fergusonii Becca 0.67 EFB2_03625 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.86 EFB2_00633 Acid stress protein IbaG low > 86
Escherichia coli ECRC99 0.67 KEDOAH_19605 cyoA cytochrome o ubiquinol oxidase subunit II 0.86 KEDOAH_10150 ibaG BolA family iron metabolism protein IbaG — —
Escherichia coli ECRC101 0.67 MCAODC_27585 cyoA cytochrome o ubiquinol oxidase subunit II 0.86 MCAODC_08520 ibaG BolA family iron metabolism protein IbaG low > 87
Escherichia coli ECRC100 0.67 OKFHMN_08360 cyoA cytochrome o ubiquinol oxidase subunit II 0.86 OKFHMN_18000 ibaG BolA family iron metabolism protein IbaG 0.76 16
Klebsiella michiganensis M5al 0.67 BWI76_RS06495 cytochrome ubiquinol oxidase subunit II 0.85 BWI76_RS25205 hypothetical protein low > 92
Escherichia coli ECRC98 0.67 JDDGAC_12015 cyoA cytochrome o ubiquinol oxidase subunit II 0.86 JDDGAC_21625 ibaG BolA family iron metabolism protein IbaG low > 86
Enterobacter sp. TBS_079 0.67 MPMX20_01023 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.88 MPMX20_04096 Acid stress protein IbaG low > 85
Escherichia coli ECRC102 0.67 NIAGMN_06415 cyoA cytochrome o ubiquinol oxidase subunit II 0.86 NIAGMN_15760 ibaG BolA family iron metabolism protein IbaG — —
Enterobacter asburiae PDN3 0.66 EX28DRAFT_2539 cytochrome o ubiquinol oxidase subunit II 0.88 EX28DRAFT_3244 Predicted transcriptional regulator, BolA superfamily low > 76
Pantoea sp. MT58 0.66 IAI47_14680 cytochrome o ubiquinol oxidase subunit II 0.76 IAI47_17120 BolA family iron metabolism protein IbaG low > 76
Serratia liquefaciens MT49 0.66 IAI46_04985 cytochrome o ubiquinol oxidase subunit II 0.94 IAI46_22405 BolA family iron metabolism protein IbaG low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.66 GFF4346 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.85 GFF2934 YrbA protein low > 78
Erwinia tracheiphila SCR3 0.65 LU632_RS18375 cyoA cytochrome o ubiquinol oxidase subunit II 0.80 LU632_RS21220 ibaG BolA family iron metabolism protein IbaG — —
Rahnella sp. WP5 0.65 EX31_RS22220 cytochrome o ubiquinol oxidase subunit II 0.88 EX31_RS12460 BolA family transcriptional regulator low > 89
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_1141 cytochrome bo3 quinol oxidase subunit 2 0.32 Psyr_4136 BolA-like protein — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_1141 cytochrome bo3 quinol oxidase subunit 2 0.32 Psyr_4136 BolA-like protein — —
Pseudomonas putida KT2440 0.56 PP_0812 cytochrome bo terminal oxidase subunit II 0.34 PP_0963 putative BolA family protein — —
Ralstonia sp. UNC404CL21Col 0.54 ABZR87_RS02335 ubiquinol oxidase subunit II 0.32 ABZR87_RS02515 BolA family protein low > 80
Pseudomonas fluorescens GW456-L13 0.53 PfGW456L13_4936 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.34 PfGW456L13_5003 YrbA protein low > 87
Burkholderia phytofirmans PsJN 0.53 BPHYT_RS24915 ubiquinol oxidase subunit II 0.32 BPHYT_RS17725 BolA family transcriptional regulator 0.41 31
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS25220 ubiquinol oxidase subunit II 0.31 PFLU_RS04455 BolA family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25 0.53 PFLU_RS25220 ubiquinol oxidase subunit II 0.31 PFLU_RS04455 BolA family transcriptional regulator low > 109
Pseudomonas fluorescens FW300-N2C3 0.53 AO356_16960 ubiquinol oxidase subunit II 0.33 AO356_06980 BolA family transcriptional regulator low > 104
Pseudomonas sp. RS175 0.53 PFR28_00242 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.33 PFR28_00184 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2E2 0.53 Pf6N2E2_5317 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.33 Pf6N2E2_3255 YrbA protein low > 103
Pseudomonas fluorescens FW300-N2E3 0.53 AO353_15450 ubiquinol oxidase subunit II 0.31 AO353_05125 BolA family transcriptional regulator low > 101
Paraburkholderia sabiae LMG 24235 0.52 QEN71_RS15340 ubiquinol oxidase subunit II 0.31 QEN71_RS27880 BolA family protein 0.61 19
Pseudomonas fluorescens FW300-N1B4 0.52 Pf1N1B4_973 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.33 Pf1N1B4_1069 YrbA protein 0.63 6
Alteromonas macleodii MIT1002 0.52 MIT1002_03929 Ubiquinol oxidase subunit 2 precursor 0.55 MIT1002_00839 transcriptional regulator BolA — —
Shewanella loihica PV-4 0.51 Shew_0366 ubiquinol oxidase, subunit II (RefSeq) 0.57 Shew_3299 BolA family protein (RefSeq) — —
Paraburkholderia graminis OAS925 0.49 ABIE53_005340 cytochrome o ubiquinol oxidase subunit 2 0.32 ABIE53_003704 acid stress-induced BolA-like protein IbaG/YrbA low > 113
Shewanella sp. ANA-3 0.49 Shewana3_4031 ubiquinol oxidase, subunit II (RefSeq) 0.62 Shewana3_0683 BolA family protein (RefSeq) low > 73
Paraburkholderia bryophila 376MFSha3.1 0.49 H281DRAFT_03426 cytochrome bo3 quinol oxidase subunit 2 (EC 1.10.3.-) 0.32 H281DRAFT_05649 transcriptional regulator, BolA protein family low > 103
Cupriavidus basilensis FW507-4G11 0.48 RR42_RS32600 cytochrome O ubiquinol oxidase subunit II 0.32 RR42_RS18930 BolA family transcriptional regulator low > 128
Variovorax sp. SCN45 0.45 GFF5678 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.32 GFF5342 YrbA protein low > 127
Acinetobacter radioresistens SK82 0.42 MPMX26_01162 Cytochrome bo(3) ubiquinol oxidase subunit 2 0.37 MPMX26_02590 Acid stress protein IbaG — —
Acidovorax sp. GW101-3H11 0.42 Ac3H11_3141 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 0.35 Ac3H11_4720 YrbA protein low > 79
Herbaspirillum seropedicae SmR1 0.40 HSERO_RS12320 cytochrome O ubiquinol oxidase 0.32 HSERO_RS20360 cell division protein BolA — —

Not shown: 9 genomes with orthologs for HER17_RS15875 only; 10 genomes with orthologs for HER17_RS20000 only