Conservation of cofitness between HER17_RS14920 and HER17_RS17925 in Pectobacterium carotovorum WPP14

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS14920 ADP-forming succinate--CoA ligase subunit beta 1.0 HER17_RS17925 FAD assembly factor SdhE 0.59 6
Dickeya dadantii 3937 0.93 DDA3937_RS06470 ADP-forming succinate--CoA ligase subunit beta 0.87 DDA3937_RS03280 FAD assembly factor SdhE
Dickeya dianthicola ME23 0.92 DZA65_RS06855 ADP-forming succinate--CoA ligase subunit beta 0.86 DZA65_RS03465 FAD assembly factor SdhE low > 75
Dickeya dianthicola 67-19 0.92 HGI48_RS06510 ADP-forming succinate--CoA ligase subunit beta 0.87 HGI48_RS03420 FAD assembly factor SdhE
Serratia liquefaciens MT49 0.91 IAI46_06285 ADP-forming succinate--CoA ligase subunit beta 0.86 IAI46_20760 FAD assembly factor SdhE low > 86
Pantoea sp. MT58 0.91 IAI47_13735 ADP-forming succinate--CoA ligase subunit beta 0.82 IAI47_03805 FAD assembly factor SdhE
Erwinia tracheiphila SCR3 0.90 LU632_RS16085 sucC ADP-forming succinate--CoA ligase subunit beta 0.81 LU632_RS05960 sdhE FAD assembly factor SdhE
Klebsiella michiganensis M5al 0.90 BWI76_RS08425 succinyl-CoA ligase subunit beta 0.85 BWI76_RS23830 hypothetical protein 0.61 5
Escherichia coli ECOR27 0.90 NOLOHH_23305 sucC ADP-forming succinate--CoA ligase subunit beta 0.81 NOLOHH_11480 sdhE FAD assembly factor SdhE 0.52 63
Escherichia coli BW25113 0.90 b0728 sucC succinyl-CoA synthetase subunit beta (NCBI) 0.81 b2897 ygfY hypothetical protein (NCBI) 0.39 15
Escherichia coli ECOR38 0.90 HEPCGN_01315 sucC ADP-forming succinate--CoA ligase subunit beta 0.81 HEPCGN_18845 sdhE FAD assembly factor SdhE low > 87
Escherichia coli Nissle 1917 0.90 ECOLIN_RS03880 ADP-forming succinate--CoA ligase subunit beta 0.81 ECOLIN_RS16140 FAD assembly factor SdhE
Escherichia coli HS(pFamp)R (ATCC 700891) 0.90 OHPLBJKB_02989 Succinate--CoA ligase [ADP-forming] subunit beta 0.81 OHPLBJKB_00818 FAD assembly factor SdhE 0.36 41
Escherichia fergusonii Becca 0.90 EFB2_03378 Succinate--CoA ligase [ADP-forming] subunit beta 0.81 EFB2_01004 FAD assembly factor SdhE low > 86
Escherichia coli ECRC98 0.90 JDDGAC_10570 sucC ADP-forming succinate--CoA ligase subunit beta 0.81 JDDGAC_23195 sdhE FAD assembly factor SdhE low > 86
Escherichia coli ECRC100 0.90 OKFHMN_06915 sucC ADP-forming succinate--CoA ligase subunit beta 0.81 OKFHMN_19555 sdhE FAD assembly factor SdhE low > 80
Escherichia coli BL21 0.90 ECD_00687 succinyl-CoA synthetase, beta subunit 0.81 ECD_02729 flavinator of succinate dehydrogenase; antitoxin of CptAB toxin-antitoxin pair 0.43 49
Escherichia coli ECRC101 0.90 MCAODC_26135 sucC ADP-forming succinate--CoA ligase subunit beta 0.81 MCAODC_10075 sdhE FAD assembly factor SdhE low > 87
Escherichia coli ECRC99 0.90 KEDOAH_21050 sucC ADP-forming succinate--CoA ligase subunit beta 0.81 KEDOAH_08585 sdhE FAD assembly factor SdhE
Escherichia coli ECRC62 0.90 BNILDI_21300 sucC ADP-forming succinate--CoA ligase subunit beta 0.81 BNILDI_10010 sdhE FAD assembly factor SdhE low > 75
Escherichia coli ECRC102 0.90 NIAGMN_04965 sucC ADP-forming succinate--CoA ligase subunit beta 0.81 NIAGMN_17320 sdhE FAD assembly factor SdhE
Rahnella sp. WP5 0.89 EX31_RS23450 ADP-forming succinate--CoA ligase subunit beta 0.84 EX31_RS13495 FAD assembly factor SdhE 0.54 15
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.89 GFF4641 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) 0.84 GFF2994 YgfY COG2938 0.57 41
Enterobacter sp. TBS_079 0.88 MPMX20_01356 Succinate--CoA ligase [ADP-forming] subunit beta 0.84 MPMX20_03756 FAD assembly factor SdhE 0.74 7
Enterobacter asburiae PDN3 0.88 EX28DRAFT_2264 succinyl-CoA synthetase, beta subunit 0.83 EX28DRAFT_2948 Uncharacterized conserved protein 0.67 22
Pseudomonas sp. S08-1 0.78 OH686_01955 Succinyl-CoA ligase [ADP-forming] beta chain 0.40 OH686_20030 Succinate dehydrogenase flavin-adding protein, antitoxin of CptAB toxin-antitoxin
Pseudomonas fluorescens SBW25 0.77 PFLU_RS08970 ADP-forming succinate--CoA ligase subunit beta 0.42 PFLU_RS07180 succinate dehydrogenase assembly factor 2
Pseudomonas fluorescens SBW25-INTG 0.77 PFLU_RS08970 ADP-forming succinate--CoA ligase subunit beta 0.42 PFLU_RS07180 succinate dehydrogenase assembly factor 2
Pseudomonas fluorescens GW456-L13 0.77 PfGW456L13_4266 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) 0.42 PfGW456L13_4519 YgfY COG2938
Pseudomonas fluorescens FW300-N2E3 0.77 AO353_01820 succinyl-CoA synthetase subunit beta 0.40 AO353_17610 hypothetical protein
Pseudomonas fluorescens FW300-N2E2 0.77 Pf6N2E2_5858 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) 0.42 Pf6N2E2_2760 YgfY COG2938
Pseudomonas simiae WCS417 0.77 PS417_08910 succinyl-CoA synthetase subunit beta 0.42 PS417_07105 hypothetical protein
Pseudomonas fluorescens FW300-N2C3 0.77 AO356_19710 succinyl-CoA synthetase subunit beta 0.42 AO356_04590 hypothetical protein
Shewanella amazonensis SB2B 0.77 Sama_1429 sucC succinyl-CoA synthetase subunit beta (RefSeq) 0.46 Sama_0871 hypothetical protein (RefSeq)
Pseudomonas fluorescens FW300-N1B4 0.77 Pf1N1B4_3684 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) 0.42 Pf1N1B4_3320 YgfY COG2938
Pseudomonas sp. RS175 0.77 PFR28_03093 Succinate--CoA ligase [ADP-forming] subunit beta 0.41 PFR28_00687 FAD assembly factor SdhE
Vibrio cholerae E7946 ATCC 55056 0.77 CSW01_10420 succinyl-CoA ligase subunit beta 0.51 CSW01_12505 succinate dehydrogenase assembly factor 2 family protein
Marinobacter adhaerens HP15 0.76 HP15_1524 succinyl-CoA synthetase, beta subunit 0.33 HP15_773 conserved hypothetical protein
Pseudomonas syringae pv. syringae B728a ΔmexB 0.76 Psyr_2012 succinyl-CoA synthetase (ADP-forming) beta subunit 0.40 Psyr_3961 Protein of unknown function DUF339
Pseudomonas syringae pv. syringae B728a 0.76 Psyr_2012 succinyl-CoA synthetase (ADP-forming) beta subunit 0.40 Psyr_3961 Protein of unknown function DUF339
Shewanella sp. ANA-3 0.76 Shewana3_1712 sucC succinyl-CoA synthetase subunit beta (RefSeq) 0.47 Shewana3_3035 hypothetical protein (RefSeq)
Alteromonas macleodii MIT1002 0.75 MIT1002_01950 Succinyl-CoA ligase [ADP-forming] subunit beta 0.49 MIT1002_02723 Antitoxin CptB
Shewanella oneidensis MR-1 0.75 SO1932 sucC succinyl-CoA synthase, beta subunit (NCBI ptt file) 0.46 SO1339 conserved hypothetical protein (NCBI ptt file)
Shewanella loihica PV-4 0.75 Shew_1657 sucC succinyl-CoA synthetase subunit beta (RefSeq) 0.44 Shew_1045 hypothetical protein (RefSeq)
Pseudomonas putida KT2440 0.74 PP_4186 succinyl-CoA synthetase, beta subunit glutaryl-CoA synthetase, beta subunit 0.42 PP_1424 conserved protein of unknown function, DUF339 family
Pseudomonas stutzeri RCH2 0.74 Psest_2491 succinyl-CoA synthetase, beta subunit 0.41 Psest_3103 Uncharacterized conserved protein
Kangiella aquimarina DSM 16071 0.73 B158DRAFT_1426 succinyl-CoA synthetase, beta subunit 0.32 B158DRAFT_2177 Uncharacterized conserved protein
Rhodanobacter sp. FW510-T8 0.58 OKGIIK_01760 sucC ADP-forming succinate--CoA ligase subunit beta 0.30 OKGIIK_08470 sdhE Succinate dehydrogenase flavin-adding protein, antitoxin component of the CptAB toxin-antitoxin module
Rhodanobacter denitrificans FW104-10B01 0.57 LRK54_RS04985 ADP-forming succinate--CoA ligase subunit beta 0.29 LRK54_RS16185 succinate dehydrogenase assembly factor 2
Rhodanobacter denitrificans MT42 0.57 LRK55_RS04765 ADP-forming succinate--CoA ligase subunit beta 0.29 LRK55_RS15935 succinate dehydrogenase assembly factor 2

Not shown: 46 genomes with orthologs for HER17_RS14920 only; 0 genomes with orthologs for HER17_RS17925 only