Conservation of cofitness between HER17_RS20290 and HER17_RS17630 in Pectobacterium carotovorum WPP14

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS20290 amino acid ABC transporter substrate-binding protein 1.0 HER17_RS17630 acetate--CoA ligase 0.67 8
Dickeya dadantii 3937 0.93 DDA3937_RS01270 amino acid ABC transporter substrate-binding protein 0.91 DDA3937_RS03480 acetate--CoA ligase low > 74
Dickeya dianthicola 67-19 0.93 HGI48_RS01255 amino acid ABC transporter substrate-binding protein 0.90 HGI48_RS03580 acetate--CoA ligase low > 71
Dickeya dianthicola ME23 0.93 DZA65_RS01300 amino acid ABC transporter substrate-binding protein 0.90 DZA65_RS03695 acetate--CoA ligase low > 75
Rahnella sp. WP5 0.86 EX31_RS12155 amino acid ABC transporter substrate-binding protein 0.85 EX31_RS09040 acetate--CoA ligase low > 89
Enterobacter sp. TBS_079 0.86 MPMX20_04177 Putative amino-acid ABC transporter-binding protein YhdW 0.85 MPMX20_00291 Acetyl-coenzyme A synthetase low > 85
Enterobacter asburiae PDN3 0.85 EX28DRAFT_3321 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 0.85 EX28DRAFT_4232 acetate--CoA ligase low > 76
Erwinia tracheiphila SCR3 0.85 LU632_RS19770 amino acid ABC transporter substrate-binding protein 0.84 LU632_RS23305 acs acetate--CoA ligase low > 74
Escherichia fergusonii Becca 0.84 EFB2_00555 Putative amino-acid ABC transporter-binding protein YhdW 0.85 EFB2_04520 Acetyl-coenzyme A synthetase low > 86
Escherichia coli ECRC98 0.84 JDDGAC_21260 yhdW Putative amino-acid ABC transporter-binding protein YhdW 0.86 JDDGAC_16465 acs acetate--CoA ligase low > 86
Escherichia coli ECOR38 0.84 HEPCGN_16455 yhdW Putative amino-acid ABC transporter-binding protein YhdW 0.86 HEPCGN_11455 acs acetate--CoA ligase low > 87
Escherichia coli ECOR27 0.84 NOLOHH_09425 yhdW Putative amino-acid ABC transporter-binding protein YhdW 0.86 NOLOHH_05080 acs acetate--CoA ligase low > 75
Escherichia coli ECRC102 0.84 NIAGMN_15395 yhdW Putative amino-acid ABC transporter-binding protein YhdW 0.86 NIAGMN_10675 acs acetate--CoA ligase
Escherichia coli ECRC101 0.84 MCAODC_08155 yhdW Putative amino-acid ABC transporter-binding protein YhdW 0.86 MCAODC_03340 acs acetate--CoA ligase low > 87
Escherichia coli ECRC100 0.84 OKFHMN_17635 yhdW Putative amino-acid ABC transporter-binding protein YhdW 0.86 OKFHMN_12830 acs acetate--CoA ligase low > 80
Escherichia coli ECRC99 0.84 KEDOAH_10515 yhdW Putative amino-acid ABC transporter-binding protein YhdW 0.86 KEDOAH_15320 acs acetate--CoA ligase
Escherichia coli HS(pFamp)R (ATCC 700891) 0.84 OHPLBJKB_00436 Putative amino-acid ABC transporter-binding protein YhdW 0.86 OHPLBJKB_03971 Acetyl-coenzyme A synthetase low > 73
Escherichia coli ECRC62 0.84 BNILDI_02095 yhdW Putative amino-acid ABC transporter-binding protein YhdW 0.86 BNILDI_06445 acs acetate--CoA ligase low > 75
Escherichia coli Nissle 1917 0.84 ECOLIN_RS18775 amino acid ABC transporter substrate-binding protein 0.85 ECOLIN_RS23550 acetate--CoA ligase low > 55
Pantoea sp. MT58 0.84 IAI47_02375 amino acid ABC transporter substrate-binding protein 0.83 IAI47_17715 acetate--CoA ligase low > 76
Escherichia coli BL21 0.79 ECD_03126 putative amino-acid transporter subunit 0.86 ECD_03941 acetyl-CoA synthetase low > 61
Pseudomonas stutzeri RCH2 0.77 Psest_3163 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 0.66 Psest_2657 acetate--CoA ligase low > 67
Pseudomonas sp. S08-1 0.75 OH686_17805 Amino acid ABC transporter, substrate-binding protein YhdW 0.72 OH686_21250 acetate--CoA ligase low > 80
Pseudomonas simiae WCS417 0.74 PS417_23345 amino acid ABC transporter substrate-binding protein 0.71 PS417_21750 acetyl-CoA synthetase low > 88
Pseudomonas syringae pv. syringae B728a 0.73 Psyr_1072 amino acid ABC transporter substrate-binding protein, PAAT family 0.71 Psyr_3572 acetyl-coenzyme A synthetase low > 86
Pseudomonas fluorescens SBW25 0.73 PFLU_RS25160 amino acid ABC transporter substrate-binding protein 0.71 PFLU_RS23355 acetate--CoA ligase low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.73 Psyr_1072 amino acid ABC transporter substrate-binding protein, PAAT family 0.71 Psyr_3572 acetyl-coenzyme A synthetase low > 86
Pseudomonas fluorescens SBW25-INTG 0.73 PFLU_RS25160 amino acid ABC transporter substrate-binding protein 0.71 PFLU_RS23355 acetate--CoA ligase low > 109
Pseudomonas putida KT2440 0.72 PP_1297 putative amino-acid ABC transporter-binding protein YhdW 0.71 PP_4487 acetyl-CoA synthetase low > 96
Pseudomonas fluorescens FW300-N1B4 0.69 Pf1N1B4_917 Glutamate Aspartate periplasmic binding protein precursor GltI (TC 3.A.1.3.4) 0.71 Pf1N1B4_3430 Acetyl-coenzyme A synthetase (EC 6.2.1.1) low > 87
Pseudomonas fluorescens FW300-N2E2 0.69 Pf6N2E2_5402 ABC transporter for D-Alanine, periplasmic substrate-binding component (from data) 0.71 Pf6N2E2_5659 Acetyl-coenzyme A synthetase (EC 6.2.1.1) low > 103
Pseudomonas sp. RS175 0.69 PFR28_03542 Putative amino-acid ABC transporter-binding protein YhdW 0.71 PFR28_03289 Acetyl-coenzyme A synthetase low > 88
Pseudomonas fluorescens FW300-N2C3 0.69 AO356_17380 amino acid ABC transporter substrate-binding protein 0.71 AO356_18695 Acetyl-coenzyme A synthetase (EC 6.2.1.1) (from data) low > 104
Pseudomonas fluorescens FW300-N2E3 0.68 AO353_04615 amino acid ABC transporter substrate-binding protein 0.71 AO353_03060 Acetyl-coenzyme A synthetase (EC 6.2.1.1) (from data) low > 101
Pseudomonas fluorescens GW456-L13 0.68 PfGW456L13_1698 Glutamate Aspartate periplasmic binding protein precursor GltI (TC 3.A.1.3.4) 0.71 PfGW456L13_1963 Acetyl-coenzyme A synthetase (EC 6.2.1.1) low > 87
Rhodospirillum rubrum S1H 0.64 Rru_A1004 Lysine-arginine-ornithine-binding periplasmic protein (NCBI) 0.66 Rru_A3575 Acetate--CoA ligase (NCBI) low > 58
Rhizobium sp. OAE497 0.59 ABIE40_RS08815 amino acid ABC transporter substrate-binding protein 0.64 ABIE40_RS19160 acetate--CoA ligase low > 107
Sinorhizobium meliloti 1021 0.58 SMc02118 ABC transporter for L-Glutamine, L-Histidine, and other L-amino acids, periplasmic substrate-binding component (from data) 0.64 SMc04093 acetyl-CoA synthetase low > 103
Rhodopseudomonas palustris CGA009 0.58 TX73_013240 amino acid ABC transporter substrate-binding protein 0.67 TX73_001095 acetate--CoA ligase low > 86
Vibrio cholerae E7946 ATCC 55056 0.58 CSW01_06855 amino acid ABC transporter substrate-binding protein 0.78 CSW01_01520 acetyl-coenzyme A synthetase low > 62
Bosea sp. OAE506 0.57 ABIE41_RS16030 amino acid ABC transporter substrate-binding protein 0.67 ABIE41_RS05675 acetate--CoA ligase low > 77
Marinobacter adhaerens HP15 0.57 HP15_2196 glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein 0.72 HP15_811 acetyl-CoA synthetase low > 73
Agrobacterium fabrum C58 0.56 Atu1577 ABC transporter, substrate binding protein (amino acid) 0.64 Atu2745 acetyl-coenzyme A synthetase low > 89
Azospirillum brasilense Sp245 0.54 AZOBR_RS08655 amino acid ABC transporter substrate-binding protein 0.68 AZOBR_RS00270 acetyl-CoA synthetase low > 97
Variovorax sp. OAS795 0.51 ABID97_RS13290 amino acid ABC transporter substrate-binding protein 0.47 ABID97_RS27430 acetate--CoA ligase low > 91
Variovorax sp. SCN45 0.50 GFF4217 Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) 0.46 GFF6925 Acetyl-CoA synthetase (EC 6.2.1.1) low > 127
Dinoroseobacter shibae DFL-12 0.46 Dshi_0318 cationic amino acid ABC transporter, periplasmic binding protein (RefSeq) 0.64 Dshi_3553 acetate--CoA ligase (RefSeq)
Brevundimonas sp. GW460-12-10-14-LB2 0.45 A4249_RS05590 amino acid ABC transporter substrate-binding protein 0.62 A4249_RS15190 acetate--CoA ligase low > 48
Phaeobacter inhibens DSM 17395 0.45 PGA1_c01980 glutamate/glutamine/aspartate/asparagine-binding protein BztA 0.60 PGA1_c12950 acetyl-coenzyme A synthetase Acs low > 62
Synechococcus elongatus PCC 7942 0.44 Synpcc7942_0246 extracellular solute-binding protein, family 3 0.51 Synpcc7942_1352 acsA acetyl-CoA synthetase low > 38

Not shown: 0 genomes with orthologs for HER17_RS20290 only; 50 genomes with orthologs for HER17_RS17630 only