Conservation of cofitness between HER17_RS00785 and HER17_RS14940 in Pectobacterium carotovorum WPP14

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS00785 agmatine deiminase 1.0 HER17_RS14940 succinate dehydrogenase flavoprotein subunit 0.64 10
Dickeya dadantii 3937 0.82 DDA3937_RS00855 agmatine deiminase 0.93 DDA3937_RS06450 succinate dehydrogenase flavoprotein subunit low > 74
Dickeya dianthicola 67-19 0.80 HGI48_RS20520 agmatine deiminase 0.93 HGI48_RS06490 succinate dehydrogenase flavoprotein subunit 0.58 24
Dickeya dianthicola ME23 0.79 DZA65_RS21565 agmatine deiminase 0.93 DZA65_RS06835 succinate dehydrogenase flavoprotein subunit low > 75
Shewanella amazonensis SB2B 0.69 Sama_2521 agmatine deiminase (RefSeq) 0.77 Sama_1425 sdhA succinate dehydrogenase flavoprotein subunit (RefSeq) — —
Shewanella sp. ANA-3 0.68 Shewana3_3465 agmatine deiminase (RefSeq) 0.77 Shewana3_1708 sdhA succinate dehydrogenase flavoprotein subunit (RefSeq) — —
Shewanella oneidensis MR-1 0.68 SO_0887 agmatine deiminase (RefSeq) 0.77 SO1928 sdhA succinate dehydrogenase, flavoprotein subunit (NCBI ptt file) — —
Rahnella sp. WP5 0.67 EX31_RS21180 agmatine deiminase 0.90 EX31_RS23430 succinate dehydrogenase flavoprotein subunit low > 89
Pseudomonas sp. S08-1 0.57 OH686_11505 agmatine deiminase 0.68 OH686_01980 succinate dehydrogenase, flavoprotein subunit — —
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_11915 agmatine deiminase 0.67 AO353_01845 succinate dehydrogenase — —
Pseudomonas putida KT2440 0.55 PP_0266 Agmatine deiminase 0.66 PP_4191 succinate dehydrogenase flavoprotein subunit — —
Pseudomonas sp. RS175 0.55 PFR28_04897 Agmatine deiminase 0.66 PFR28_03098 Succinate dehydrogenase flavoprotein subunit — —
Pseudomonas simiae WCS417 0.55 PS417_01340 agmatine deiminase 0.67 PS417_08885 succinate dehydrogenase — —
Pseudomonas fluorescens FW300-N2E2 0.55 Pf6N2E2_3876 Agmatine deiminase (EC 3.5.3.12) 0.67 Pf6N2E2_5853 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) — —
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS01435 agmatine deiminase 0.66 PFLU_RS08945 succinate dehydrogenase flavoprotein subunit — —
Pseudomonas fluorescens SBW25 0.55 PFLU_RS01435 agmatine deiminase 0.66 PFLU_RS08945 succinate dehydrogenase flavoprotein subunit — —
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_10030 Agmatine deiminase (EC 3.5.3.12) (from data) 0.67 AO356_19685 succinate dehydrogenase — —
Pseudomonas fluorescens FW300-N1B4 0.54 Pf1N1B4_1661 Agmatine deiminase (EC 3.5.3.12) 0.67 Pf1N1B4_3679 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) — —
Pseudomonas fluorescens GW456-L13 0.54 PfGW456L13_397 Agmatine deiminase (EC 3.5.3.12) 0.66 PfGW456L13_4271 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.54 Psyr_4932 agmatine deiminase 0.69 Psyr_2007 succinate dehydrogenase subunit A — —
Pseudomonas syringae pv. syringae B728a 0.54 Psyr_4932 agmatine deiminase 0.69 Psyr_2007 succinate dehydrogenase subunit A — —
Pseudomonas stutzeri RCH2 0.53 Psest_4291 agmatine deiminase 0.67 Psest_2496 succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup — —
Azospirillum sp. SherDot2 0.36 MPMX19_04878 Agmatine deiminase 0.48 MPMX19_02409 Succinate dehydrogenase flavoprotein subunit — —
Kangiella aquimarina DSM 16071 0.30 B158DRAFT_1812 Peptidylarginine deiminase and related enzymes 0.72 B158DRAFT_1422 succinate dehydrogenase subunit A (EC 1.3.5.1) — —
Brevundimonas sp. GW460-12-10-14-LB2 0.27 A4249_RS11140 agmatine deiminase family protein 0.50 A4249_RS13430 succinate dehydrogenase flavoprotein subunit — —
Caulobacter crescentus NA1000 Δfur 0.26 CCNA_00211 Porphyromonas-type peptidyl-arginine deiminase 0.47 CCNA_03642 succinate dehydrogenase flavoprotein subunit — —
Caulobacter crescentus NA1000 0.26 CCNA_00211 Porphyromonas-type peptidyl-arginine deiminase 0.47 CCNA_03642 succinate dehydrogenase flavoprotein subunit — —
Variovorax sp. SCN45 0.24 GFF37 Similar to Agmatine deiminase 0.56 GFF3897 Succinate dehydrogenase flavoprotein subunit (EC 1.3.5.1) — —
Lysobacter sp. OAE881 0.23 ABIE51_RS09325 agmatine deiminase family protein 0.48 ABIE51_RS12520 succinate dehydrogenase flavoprotein subunit — —
Rhodanobacter sp. FW510-T8 0.23 OKGIIK_06975 Agmatine deiminase 0.48 OKGIIK_08480 sdhA succinate dehydrogenase flavoprotein subunit — —
Dyella japonica UNC79MFTsu3.2 0.23 ABZR86_RS02780 agmatine/peptidylarginine deiminase 0.50 ABZR86_RS06335 succinate dehydrogenase flavoprotein subunit — —
Rhodanobacter denitrificans MT42 0.22 LRK55_RS00025 agmatine deiminase family protein 0.50 LRK55_RS07215 succinate dehydrogenase flavoprotein subunit — —
Rhodanobacter denitrificans FW104-10B01 0.22 LRK54_RS00335 agmatine deiminase family protein 0.50 LRK54_RS07475 succinate dehydrogenase flavoprotein subunit — —
Marinobacter adhaerens HP15 0.21 HP15_2073 peptidyl-arginine deiminase family protein 0.68 HP15_1519 succinate dehydrogenase flavoprotein subunit-like protein — —
Sphingomonas koreensis DSMZ 15582 0.20 Ga0059261_1981 Peptidylarginine deiminase and related enzymes 0.51 Ga0059261_1330 succinate dehydrogenase subunit A (EC 1.3.5.1) — —
Xanthomonas campestris pv. campestris strain 8004 0.20 Xcc-8004.2375.1 Agmatine deiminase (EC 3.5.3.12) 0.48 Xcc-8004.2458.1 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) — —
Alteromonas macleodii MIT1002 0.19 MIT1002_03760 Putative agmatine deiminase 0.80 MIT1002_01946 Succinate dehydrogenase flavoprotein subunit — —
Serratia liquefaciens MT49 0.19 IAI46_12735 agmatine deiminase family protein 0.92 IAI46_06265 succinate dehydrogenase flavoprotein subunit low > 86
Phaeobacter inhibens DSM 17395 0.18 PGA1_c26490 putative agmatine deiminase 0.46 PGA1_c03760 succinate dehydrogenase flavoprotein subunit — —

Not shown: 11 genomes with orthologs for HER17_RS00785 only; 48 genomes with orthologs for HER17_RS14940 only