| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pectobacterium carotovorum WPP14 | 1.0 | HER17_RS04200 | | 7-carboxy-7-deazaguanine synthase QueE | 1.0 | HER17_RS10830 | | electron transport complex subunit RsxA | 0.68 | 7 |
| Serratia liquefaciens MT49 | 0.86 | IAI46_03675 | | 7-carboxy-7-deazaguanine synthase QueE | 0.85 | IAI46_11490 | | electron transport complex subunit RsxA | low | > 86 |
| Dickeya dadantii 3937 | 0.86 | DDA3937_RS16970 | | 7-carboxy-7-deazaguanine synthase QueE | 0.80 | DDA3937_RS10575 | | electron transport complex subunit RsxA | low | > 74 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.86 | GFF4831 | | Queuosine Biosynthesis QueE Radical SAM | 0.83 | GFF1815 | | Electron transport complex protein RnfA | low | > 78 |
| Escherichia coli BW25113 | 0.85 | b2777 | ygcF | hypothetical protein (NCBI) | 0.82 | b1627 | rsxA | Na(+)-translocating NADH-quinone reductase subunit E (NCBI) | low | > 76 |
| Escherichia coli BL21 | 0.85 | ECD_02622 | | 7-carboxy-7-deazaguanine synthase; queosine biosynthesis | 0.82 | ECD_01597 | | SoxR iron-sulfur cluster reduction factor component; inner membrane protein of electron transport complex | — | — |
| Escherichia coli ECRC99 | 0.85 | KEDOAH_07830 | queE | 7-carboxy-7-deazaguanine synthase QueE | 0.82 | KEDOAH_00550 | rsxA | electron transport complex subunit RsxA | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.85 | OHPLBJKB_00957 | | 7-carboxy-7-deazaguanine synthase | 0.82 | OHPLBJKB_02099 | | Electron transport complex subunit RsxA | low | > 73 |
| Escherichia coli ECRC62 | 0.85 | BNILDI_10675 | queE | 7-carboxy-7-deazaguanine synthase QueE | 0.82 | BNILDI_16865 | rsxA | electron transport complex subunit RsxA | — | — |
| Escherichia coli ECRC101 | 0.85 | MCAODC_10825 | queE | 7-carboxy-7-deazaguanine synthase QueE | 0.82 | MCAODC_17855 | rsxA | electron transport complex subunit RsxA | low | > 87 |
| Escherichia coli ECRC100 | 0.85 | OKFHMN_20300 | queE | 7-carboxy-7-deazaguanine synthase QueE | 0.82 | OKFHMN_27555 | rsxA | electron transport complex subunit RsxA | low | > 80 |
| Klebsiella michiganensis M5al | 0.85 | BWI76_RS22780 | | 7-carboxy-7-deazaguanine synthase QueE | 0.81 | BWI76_RS16355 | | electron transport complex subunit A | low | > 92 |
| Escherichia coli ECRC102 | 0.85 | NIAGMN_18070 | queE | 7-carboxy-7-deazaguanine synthase QueE | 0.82 | NIAGMN_00510 | rsxA | electron transport complex subunit RsxA | — | — |
| Escherichia coli ECRC98 | 0.85 | JDDGAC_23965 | queE | 7-carboxy-7-deazaguanine synthase QueE | 0.82 | JDDGAC_02145 | rsxA | electron transport complex subunit RsxA | low | > 86 |
| Escherichia coli ECOR27 | 0.85 | NOLOHH_12170 | queE | 7-carboxy-7-deazaguanine synthase QueE | 0.82 | NOLOHH_18075 | rsxA | electron transport complex subunit RsxA | — | — |
| Escherichia coli Nissle 1917 | 0.85 | ECOLIN_RS15475 | | 7-carboxy-7-deazaguanine synthase QueE | 0.82 | ECOLIN_RS09080 | | electron transport complex subunit RsxA | — | — |
| Escherichia fergusonii Becca | 0.85 | EFB2_01141 | | 7-carboxy-7-deazaguanine synthase | 0.82 | EFB2_02365 | | Ion-translocating oxidoreductase complex subunit A | low | > 86 |
| Escherichia coli ECOR38 | 0.85 | HEPCGN_19205 | queE | 7-carboxy-7-deazaguanine synthase QueE | 0.82 | HEPCGN_05940 | rsxA | electron transport complex subunit RsxA | low | > 87 |
| Enterobacter sp. TBS_079 | 0.84 | MPMX20_03645 | | 7-carboxy-7-deazaguanine synthase | 0.82 | MPMX20_02011 | | Ion-translocating oxidoreductase complex subunit A | low | > 85 |
| Enterobacter asburiae PDN3 | 0.84 | EX28DRAFT_2855 | | putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE | 0.81 | EX28DRAFT_1623 | | electron transport complex, RnfABCDGE type, A subunit | low | > 76 |
| Erwinia tracheiphila SCR3 | 0.84 | LU632_RS06390 | queE | 7-carboxy-7-deazaguanine synthase QueE | 0.81 | LU632_RS11335 | rsxA | electron transport complex subunit RsxA | — | — |
| Rahnella sp. WP5 | 0.83 | EX31_RS07920 | | 7-carboxy-7-deazaguanine synthase QueE | 0.81 | EX31_RS06620 | | electron transport complex subunit RsxA | low | > 89 |
| Pantoea sp. MT58 | 0.80 | IAI47_04140 | | 7-carboxy-7-deazaguanine synthase QueE | 0.80 | IAI47_10445 | | electron transport complex subunit RsxA | — | — |
| Dickeya dianthicola ME23 | 0.79 | DZA65_RS18110 | | 7-carboxy-7-deazaguanine synthase QueE | 0.80 | DZA65_RS11055 | | electron transport complex subunit RsxA | low | > 75 |
| Dickeya dianthicola 67-19 | 0.79 | HGI48_RS17035 | | 7-carboxy-7-deazaguanine synthase QueE | 0.80 | HGI48_RS10575 | | electron transport complex subunit RsxA | low | > 71 |
| Vibrio cholerae E7946 ATCC 55056 | 0.64 | CSW01_06870 | | 7-carboxy-7-deazaguanine synthase QueE | 0.79 | CSW01_05175 | | electron transport complex subunit A | — | — |
| Shewanella sp. ANA-3 | 0.61 | Shewana3_2163 | | radical activating enzyme (RefSeq) | 0.77 | Shewana3_2168 | | Na(+)-translocating NADH-quinone reductase subunit E (RefSeq) | — | — |
| Shewanella loihica PV-4 | 0.61 | Shew_2061 | | radical SAM domain-containing protein (RefSeq) | 0.73 | Shew_2066 | | Na(+)-translocating NADH-quinone reductase subunit E (RefSeq) | — | — |
| Shewanella oneidensis MR-1 | 0.60 | SO2501 | | radical activating enzyme (NCBI ptt file) | 0.77 | SO2508 | | RnfAE/NqrDE family protein (NCBI ptt file) | — | — |
| Shewanella amazonensis SB2B | 0.58 | Sama_1825 | | radical activating enzyme (RefSeq) | 0.76 | Sama_1830 | | Na(+)-translocating NADH-quinone reductase subunit E (RefSeq) | — | — |
| Alteromonas macleodii MIT1002 | 0.58 | MIT1002_01264 | | 7-carboxy-7-deazaguanine synthase | 0.75 | MIT1002_01257 | | Electron transport complex protein RnfA | — | — |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.26 | Echvi_4642 | | Organic radical activating enzymes | 0.41 | Echvi_2016 | | NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit | — | — |
| Bacteroides thetaiotaomicron VPI-5482 | 0.22 | BT4454 | | conserved hypothetical protein (NCBI ptt file) | 0.53 | BT0622 | | Na+-transporting NADH:ubiquinone oxidoreductase, Electron transport complex protein rnfA (NCBI ptt file) | — | — |
| Bacteroides ovatus ATCC 8483 | 0.22 | BACOVA_05261 | | radical SAM domain protein | 0.53 | BACOVA_02241 | | electron transport complex, RnfABCDGE type, A subunit | low | > 94 |
| Bacteroides stercoris CC31F | 0.21 | HMPREF1181_RS13885 | | radical SAM protein | 0.54 | HMPREF1181_RS15100 | | electron transport complex subunit RsxA | — | — |
| Magnetospirillum magneticum AMB-1 | 0.20 | AMB_RS01255 | | 7-carboxy-7-deazaguanine synthase | 0.56 | AMB_RS13150 | | electron transport complex subunit RsxA | low | > 64 |
| Phocaeicola vulgatus CL09T03C04 | 0.19 | HMPREF1058_RS14880 | | radical SAM protein | 0.55 | HMPREF1058_RS06320 | | electron transport complex subunit RsxA | low | > 67 |
| Phocaeicola dorei CL03T12C01 | 0.18 | ABI39_RS10600 | | radical SAM protein | 0.55 | ABI39_RS20080 | | electron transport complex subunit RsxA | low | > 72 |
| Parabacteroides merdae CL09T00C40 | 0.18 | HMPREF1078_RS00750 | | radical SAM protein | 0.54 | HMPREF1078_RS15425 | | electron transport complex subunit RsxA | — | — |
| Pseudomonas sp. RS175 | 0.17 | PFR28_03404 | | 7-carboxy-7-deazaguanine synthase | 0.26 | PFR28_03344 | | Ion-translocating oxidoreductase complex subunit A | low | > 88 |
| Pseudomonas fluorescens FW300-N2C3 | 0.17 | AO356_18065 | | 7-carboxy-7-deazaguanine synthase | 0.25 | AO356_18370 | | NADH:quinone oxidoreductase | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.17 | Pf6N2E2_5545 | | Queuosine Biosynthesis QueE Radical SAM | 0.27 | Pf6N2E2_5599 | | Electron transport complex protein RnfA | low | > 103 |
| Pseudomonas fluorescens FW300-N1B4 | 0.17 | Pf1N1B4_629 | | Queuosine Biosynthesis QueE Radical SAM | 0.26 | Pf1N1B4_734 | | Electron transport complex protein RnfA | low | > 87 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.17 | DVU2658 | | conserved hypothetical protein (TIGR) | 0.49 | DVU2796 | b1627 | NADH:quinone oxidoreductase subunit RnfA (Shelley Haveman) | low | > 55 |
| Pseudomonas fluorescens FW300-N2E3 | 0.17 | AO353_03540 | | 7-carboxy-7-deazaguanine synthase | 0.25 | AO353_04060 | | NADH:quinone oxidoreductase | low | > 101 |
| Pseudomonas sp. S08-1 | 0.17 | OH686_19175 | | 7-carboxy-7-deazaguanine synthase | 0.17 | OH686_03885 | | hypothetical protein | low | > 80 |
| Pseudomonas fluorescens GW456-L13 | 0.16 | PfGW456L13_1861 | | Queuosine Biosynthesis QueE Radical SAM | 0.29 | PfGW456L13_1758 | | Electron transport complex protein RnfA | low | > 87 |
| Pseudomonas stutzeri RCH2 | 0.15 | Psest_1505 | | Organic radical activating enzymes | 0.69 | Psest_3112 | | electron transport complex, RnfABCDGE type, A subunit | low | > 67 |
| Marinobacter adhaerens HP15 | 0.15 | HP15_3815 | | organic radical activating enzyme | 0.72 | HP15_1291 | | electron transport complex, RnfA | low | > 73 |
Not shown: 35 genomes with orthologs for HER17_RS04200 only; 3 genomes with orthologs for HER17_RS10830 only