Conservation of cofitness between HER17_RS00965 and HER17_RS08170 in Pectobacterium carotovorum WPP14

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS00965 HTH-type transcriptional repressor FabR 1.0 HER17_RS08170 flagellar basal body rod protein FlgC 0.86 18
Dickeya dianthicola ME23 0.93 DZA65_RS21440 HTH-type transcriptional repressor FabR 0.92 DZA65_RS14005 flagellar basal body rod protein FlgC low > 75
Dickeya dianthicola 67-19 0.93 HGI48_RS20395 HTH-type transcriptional repressor FabR 0.92 HGI48_RS13520 flagellar basal body rod protein FlgC low > 71
Dickeya dadantii 3937 0.93 DDA3937_RS00980 HTH-type transcriptional repressor FabR 0.92 DDA3937_RS13475 flagellar basal body rod protein FlgC 0.44 21
Escherichia coli ECRC98 0.92 JDDGAC_17170 fabR HTH-type transcriptional repressor FabR 0.86 JDDGAC_07330 flgC flagellar basal body rod protein FlgC low > 86
Escherichia coli ECOR38 0.92 HEPCGN_12200 fabR HTH-type transcriptional repressor FabR 0.86 HEPCGN_23820 flgC flagellar basal body rod protein FlgC low > 87
Escherichia coli ECRC102 0.92 NIAGMN_11295 fabR HTH-type transcriptional repressor FabR 0.86 NIAGMN_24160 flgC flagellar basal body rod protein FlgC
Escherichia coli ECRC101 0.92 MCAODC_04045 fabR HTH-type transcriptional repressor FabR 0.86 MCAODC_23030 flgC flagellar basal body rod protein FlgC low > 87
Enterobacter asburiae PDN3 0.92 EX28DRAFT_4426 transcriptional regulator, TetR family 0.84 EX28DRAFT_1858 flagellar basal-body rod protein FlgC low > 76
Escherichia coli BW25113 0.92 b3963 fabR DNA-binding transcriptional repressor (RefSeq) 0.86 b1074 flgC flagellar basal-body rod protein C (NCBI) low > 76
Escherichia coli ECRC62 0.92 BNILDI_05835 fabR HTH-type transcriptional repressor FabR 0.86 BNILDI_19360 flgC flagellar basal body rod protein FlgC low > 75
Escherichia coli Nissle 1917 0.92 ECOLIN_RS22890 HTH-type transcriptional repressor FabR 0.86 ECOLIN_RS06220 flagellar basal body rod protein FlgC low > 55
Escherichia coli ECRC100 0.92 OKFHMN_13545 fabR HTH-type transcriptional repressor FabR 0.86 OKFHMN_03670 flgC flagellar basal body rod protein FlgC low > 80
Escherichia fergusonii Becca 0.92 EFB2_04647 HTH-type transcriptional repressor FabR 0.86 EFB2_02900 Flagellar basal-body rod protein FlgC low > 86
Escherichia coli ECRC99 0.92 KEDOAH_14615 fabR HTH-type transcriptional repressor FabR 0.86 KEDOAH_24085 flgC flagellar basal body rod protein FlgC
Enterobacter sp. TBS_079 0.92 MPMX20_04517 HTH-type transcriptional repressor FabR 0.83 MPMX20_01753 Flagellar basal-body rod protein FlgC low > 85
Escherichia coli BL21 0.92 ECD_03848 transcriptional repressor of fabA and fabB 0.86 ECD_01070 flagellar component of cell-proximal portion of basal-body rod
Escherichia coli ECOR27 0.92 NOLOHH_05690 fabR HTH-type transcriptional repressor FabR 0.86 NOLOHH_21200 flgC flagellar basal body rod protein FlgC low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.92 OHPLBJKB_04087 HTH-type transcriptional repressor FabR 0.86 OHPLBJKB_02591 Flagellar basal-body rod protein FlgC low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF2349 Unsaturated fatty acid biosythesis repressor FabR, TetR family 0.84 GFF3355 Flagellar basal-body rod protein FlgC low > 78
Serratia liquefaciens MT49 0.91 IAI46_24465 HTH-type transcriptional repressor FabR 0.88 IAI46_15955 flagellar basal body rod protein FlgC low > 86
Rahnella sp. WP5 0.90 EX31_RS14160 HTH-type transcriptional repressor FabR 0.86 EX31_RS11310 flagellar basal body rod protein FlgC low > 89
Erwinia tracheiphila SCR3 0.90 LU632_RS19580 fabR HTH-type transcriptional repressor FabR 0.80 LU632_RS10400 flgC flagellar basal body rod protein FlgC low > 74
Pantoea sp. MT58 0.90 IAI47_00940 HTH-type transcriptional repressor FabR 0.83 IAI47_12160 flagellar basal body rod protein FlgC low > 76
Vibrio cholerae E7946 ATCC 55056 0.71 CSW01_00775 HTH-type transcriptional repressor FabR 0.43 CSW01_11220 flagellar basal body rod protein FlgC low > 62
Shewanella amazonensis SB2B 0.65 Sama_0192 DNA-binding transcriptional repressor FabR (RefSeq) 0.50 Sama_2317 flgC flagellar basal body rod protein FlgC (RefSeq) low > 62
Shewanella sp. ANA-3 0.65 Shewana3_0178 DNA-binding transcriptional repressor FabR (RefSeq) 0.45 Shewana3_1322 flgC flagellar basal body rod protein FlgC (RefSeq) low > 73
Shewanella loihica PV-4 0.65 Shew_0137 DNA-binding transcriptional repressor FabR (RefSeq) 0.48 Shew_1346 flgC flagellar basal body rod protein FlgC (RefSeq)
Shewanella oneidensis MR-1 0.65 SO0198 transcriptional regulator, TetR family (NCBI ptt file) 0.45 SO3249 flgC flagellar basal-body rod protein FlgC (NCBI ptt file) low > 76
Marinobacter adhaerens HP15 0.56 HP15_2045 DNA-binding transcriptional repressor FabR 0.46 HP15_1468 flagellar basal-body rod protein FlgC-like protein 0.50 45
Alteromonas macleodii MIT1002 0.55 MIT1002_03371 HTH-type transcriptional repressor FabR 0.44 MIT1002_01040 Putative proximal rod protein low > 70
Xanthomonas campestris pv. campestris strain 8004 0.32 Xcc-8004.4923.1 Unsaturated fatty acid biosythesis repressor FabR, TetR family 0.45 Xcc-8004.2779.1 Flagellar basal-body rod protein FlgC low > 74
Pseudomonas sp. S08-1 0.31 OH686_16690 Transcriptional regulator, AcrR family 0.45 OH686_02970 flagellar basal-body rod protein FlgC low > 80
Pseudomonas syringae pv. syringae B728a 0.29 Psyr_4450 transcriptional regulator, TetR family 0.50 Psyr_3480 Flagellar basal-body rod protein FlgC low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.29 Psyr_4450 transcriptional regulator, TetR family 0.50 Psyr_3480 Flagellar basal-body rod protein FlgC low > 86
Lysobacter sp. OAE881 0.28 ABIE51_RS00935 HTH-type transcriptional repressor FabR 0.53 ABIE51_RS16675 flagellar basal body rod protein FlgC low > 62
Pseudomonas fluorescens GW456-L13 0.28 PfGW456L13_110 Unsaturated fatty acid biosythesis repressor FabR, TetR family 0.48 PfGW456L13_2002 Flagellar basal-body rod protein FlgC low > 87
Pseudomonas fluorescens FW300-N1B4 0.28 Pf1N1B4_1370 Unsaturated fatty acid biosythesis repressor FabR, TetR family 0.49 Pf1N1B4_3473 Flagellar basal-body rod protein FlgC low > 87
Pseudomonas fluorescens FW300-N2E3 0.27 AO353_13415 TetR family transcriptional regulator 0.48 AO353_02855 flagellar basal-body rod protein FlgC low > 101
Pseudomonas putida KT2440 0.27 PP_4859 Transcriptional regulator, TetR family 0.45 PP_4390 flagellar basal-body rod protein FlgC low > 96
Pseudomonas sp. RS175 0.27 PFR28_05164 HTH-type transcriptional repressor FabR 0.48 PFR28_03253 Flagellar basal-body rod protein FlgC low > 88
Pseudomonas fluorescens FW300-N2E2 0.27 Pf6N2E2_3568 Unsaturated fatty acid biosythesis repressor FabR, TetR family 0.48 Pf6N2E2_5695 Flagellar basal-body rod protein FlgC low > 103
Pseudomonas fluorescens FW300-N2C3 0.27 AO356_08445 TetR family transcriptional regulator 0.48 AO356_18920 flagellar basal-body rod protein FlgC low > 104
Pseudomonas simiae WCS417 0.27 PS417_02720 TetR family transcriptional regulator 0.46 PS417_21565 flagellar basal body rod protein FlgC low > 88
Pseudomonas fluorescens SBW25 0.26 PFLU_RS02790 TetR family transcriptional regulator 0.47 PFLU_RS23175 flagellar basal body rod protein FlgC low > 109
Pseudomonas fluorescens SBW25-INTG 0.26 PFLU_RS02790 TetR family transcriptional regulator 0.47 PFLU_RS23175 flagellar basal body rod protein FlgC low > 109
Paraburkholderia graminis OAS925 0.22 ABIE53_002363 AcrR family transcriptional regulator 0.65 ABIE53_000101 flagellar basal-body rod protein FlgC low > 113
Burkholderia phytofirmans PsJN 0.21 BPHYT_RS11410 TetR family transcriptional regulator 0.65 BPHYT_RS18890 flagellar basal body rod protein FlgC low > 109

Not shown: 3 genomes with orthologs for HER17_RS00965 only; 36 genomes with orthologs for HER17_RS08170 only