Conservation of cofitness between HER17_RS12855 and HER17_RS05560 in Pectobacterium carotovorum WPP14

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12855 PTS fructose transporter subunit IIBC 1.0 HER17_RS05560 3-methyl-2-oxobutanoate hydroxymethyltransferase 0.71 12
Dickeya dianthicola 67-19 0.83 HGI48_RS09270 PTS fructose transporter subunit IIBC 0.81 HGI48_RS16070 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 71
Dickeya dadantii 3937 0.83 DDA3937_RS09240 PTS fructose transporter subunit IIBC 0.81 DDA3937_RS15955 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 74
Dickeya dianthicola ME23 0.83 DZA65_RS09575 PTS fructose transporter subunit IIBC 0.81 DZA65_RS17155 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 75
Serratia liquefaciens MT49 0.77 IAI46_17230 PTS fructose transporter subunit IIBC 0.79 IAI46_21240 3-methyl-2-oxobutanoate hydroxymethyltransferase 0.41 67
Escherichia coli HS(pFamp)R (ATCC 700891) 0.76 OHPLBJKB_01543 'PTS system fructose-specific EIIB'BC component' transl_table=11 0.78 OHPLBJKB_03527 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 73
Escherichia coli BL21 0.76 ECD_02096 fused fructose-specific PTS enzymes: IIBcomponent/IIC components 0.78 ECD_00133 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 61
Escherichia coli ECRC62 0.75 BNILDI_13940 fruA PTS fructose transporter subunit IIBC 0.78 BNILDI_08925 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 75
Escherichia coli ECOR27 0.75 NOLOHH_15020 fruA PTS fructose transporter subunit IIBC 0.78 NOLOHH_02745 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.75 GFF3773 PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) 0.77 GFF91 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) low > 78
Escherichia coli ECOR38 0.75 HEPCGN_22710 fruA PTS fructose transporter subunit IIBC 0.78 HEPCGN_08375 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 87
Pantoea sp. MT58 0.75 IAI47_06660 PTS fructose transporter subunit IIBC 0.72 IAI47_15655 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 76
Escherichia coli Nissle 1917 0.75 ECOLIN_RS12675 PTS fructose transporter subunit IIBC 0.77 ECOLIN_RS00745 3-methyl-2-oxobutanoate hydroxymethyltransferase
Enterobacter sp. TBS_079 0.75 MPMX20_03131 PTS system fructose-specific EIIB'BC component 0.78 MPMX20_00827 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 85
Escherichia coli ECRC99 0.75 KEDOAH_04740 fruA PTS fructose transporter subunit IIBC 0.77 KEDOAH_17755 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase
Enterobacter asburiae PDN3 0.75 EX28DRAFT_0396 PTS system, fructose-specific, IIB component/PTS system, fructose subfamily, IIC component 0.77 EX28DRAFT_3730 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 76
Escherichia coli ECRC102 0.75 NIAGMN_21210 fruA PTS fructose transporter subunit IIBC 0.78 NIAGMN_08250 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase
Escherichia fergusonii Becca 0.75 EFB2_01690 PTS system fructose-specific EIIB'BC component 0.77 EFB2_03910 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 86
Escherichia coli ECRC101 0.75 MCAODC_14495 fruA PTS fructose transporter subunit IIBC 0.78 MCAODC_00915 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 87
Escherichia coli ECRC98 0.75 JDDGAC_27405 fruA PTS fructose transporter subunit IIBC 0.78 JDDGAC_13995 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 86
Escherichia coli ECRC100 0.75 OKFHMN_23445 fruA PTS fructose transporter subunit IIBC 0.78 OKFHMN_10400 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 80
Escherichia coli BW25113 0.75 b2167 fruA fused fructose-specific PTS enzymes: IIBcomponent/IIC components (NCBI) 0.78 b0134 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase (NCBI) low > 76
Klebsiella michiganensis M5al 0.74 BWI76_RS19725 PTS fructose transporter subunit EIIBC 0.77 BWI76_RS04995 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 92
Rahnella sp. WP5 0.74 EX31_RS19065 PTS fructose transporter subunit IIBC 0.80 EX31_RS03280 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 89
Erwinia tracheiphila SCR3 0.73 LU632_RS17315 fruA PTS fructose transporter subunit IIBC 0.76 LU632_RS20100 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 74
Vibrio cholerae E7946 ATCC 55056 0.59 CSW01_16820 PTS fructose transporter subunit IIBC 0.67 CSW01_03135 3-methyl-2-oxobutanoate hydroxymethyltransferase
Pseudomonas fluorescens GW456-L13 0.55 PfGW456L13_5073 PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) 0.55 PfGW456L13_1521 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) low > 87
Pseudomonas sp. RS175 0.55 PFR28_00107 hypothetical protein 0.57 PFR28_03721 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 88
Pseudomonas fluorescens FW300-N2E2 0.55 Pf6N2E2_3337 PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) 0.56 Pf6N2E2_5153 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) low > 103
Pseudomonas syringae pv. syringae B728a 0.55 Psyr_0823 PTS system D-fructose-specific IIB component (F1P-forming), Frc family / PTS system D-fructose-specific IIC component (F1P-forming), Frc family 0.55 Psyr_0828 ketopantoate hydroxymethyltransferase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.55 Psyr_0823 PTS system D-fructose-specific IIB component (F1P-forming), Frc family / PTS system D-fructose-specific IIC component (F1P-forming), Frc family 0.55 Psyr_0828 ketopantoate hydroxymethyltransferase low > 86
Pseudomonas fluorescens FW300-N1B4 0.54 Pf1N1B4_1144 PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) 0.55 Pf1N1B4_2854 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) low > 87
Pseudomonas fluorescens FW300-N2E3 0.54 AO353_05475 PTS fructose transporter subunit IIBC 0.56 AO353_14385 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 101
Pseudomonas stutzeri RCH2 0.54 Psest_3353 PTS system, fructose-specific, IIB component/PTS system, fructose subfamily, IIC component 0.52 Psest_0996 3-methyl-2-oxobutanoate hydroxymethyltransferase
Marinobacter adhaerens HP15 0.53 HP15_3725 PTS system, fructose-specific IIBC component 0.56 HP15_324 3-methyl-2-oxobutanoate hydroxymethyltransferase
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS04020 PTS fructose-like transporter subunit IIB 0.54 PFLU_RS25750 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 109
Pseudomonas fluorescens SBW25 0.53 PFLU_RS04020 PTS fructose-like transporter subunit IIB 0.54 PFLU_RS25750 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 109
Pseudomonas fluorescens FW300-N2C3 0.53 AO356_07325 fructose phosphotransferase system, IIB/IIC components (EC 2.7.1.202) (from data) 0.56 AO356_16060 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 104
Pseudomonas simiae WCS417 0.51 PS417_03975 FruA 0.55 PS417_23910 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 88
Pseudomonas putida KT2440 0.49 PP_0795 fructose PTS permease - IIBC component 0.56 PP_4699 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 96
Ralstonia sp. UNC404CL21Col 0.45 ABZR87_RS02050 fructose-specific PTS transporter subunit EIIC 0.51 ABZR87_RS00950 3-methyl-2-oxobutanoate hydroxymethyltransferase
Paraburkholderia graminis OAS925 0.45 ABIE53_004213 PTS system fructose-specific IIC component 0.51 ABIE53_000867 3-methyl-2-oxobutanoate hydroxymethyltransferase
Azospirillum brasilense Sp245 0.44 AZOBR_RS32335 fructose-specific PTS system (fructose 1-phosphate forming), EII-B'BC components (FruA) (from data) 0.36 AZOBR_RS06445 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 97
Ralstonia solanacearum GMI1000 0.44 RS_RS14320 PTS fructose transporter subunit IIBC 0.53 RS_RS13180 3-methyl-2-oxobutanoate hydroxymethyltransferase
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.2174.1 hypothetical protein 0.49 Xcc-8004.3052.1 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11)
Ralstonia solanacearum PSI07 0.42 RPSI07_RS10870 PTS fructose transporter subunit IIBC 0.52 RPSI07_RS11985 3-methyl-2-oxobutanoate hydroxymethyltransferase
Ralstonia solanacearum UW163 0.42 UW163_RS07255 PTS fructose transporter subunit IIBC 0.52 UW163_RS08310 3-methyl-2-oxobutanoate hydroxymethyltransferase
Ralstonia solanacearum IBSBF1503 0.42 RALBFv3_RS06370 PTS fructose transporter subunit IIBC 0.52 RALBFv3_RS05315 3-methyl-2-oxobutanoate hydroxymethyltransferase
Azospirillum sp. SherDot2 0.42 MPMX19_05329 PTS system fructose-specific EIIB'BC component 0.36 MPMX19_01580 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 112

Not shown: 0 genomes with orthologs for HER17_RS12855 only; 50 genomes with orthologs for HER17_RS05560 only