Conservation of cofitness between HER17_RS12855 and HER17_RS05040 in Pectobacterium carotovorum WPP14

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12855 PTS fructose transporter subunit IIBC 1.0 HER17_RS05040 nicotinamide-nucleotide amidase 0.70 16
Dickeya dadantii 3937 0.83 DDA3937_RS09240 PTS fructose transporter subunit IIBC 0.72 DDA3937_RS16250 nicotinamide-nucleotide amidase low > 74
Dickeya dianthicola 67-19 0.83 HGI48_RS09270 PTS fructose transporter subunit IIBC 0.71 HGI48_RS16360 nicotinamide-nucleotide amidase low > 71
Dickeya dianthicola ME23 0.83 DZA65_RS09575 PTS fructose transporter subunit IIBC 0.72 DZA65_RS17455 nicotinamide-nucleotide amidase low > 75
Serratia liquefaciens MT49 0.77 IAI46_17230 PTS fructose transporter subunit IIBC 0.64 IAI46_03835 nicotinamide-nucleotide amidase low > 86
Escherichia coli BL21 0.76 ECD_02096 fused fructose-specific PTS enzymes: IIBcomponent/IIC components 0.65 ECD_02550 nicotinamide-nucleotide amidohydrolase; NMN amidohydrolase low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.76 OHPLBJKB_01543 'PTS system fructose-specific EIIB'BC component' transl_table=11 0.65 OHPLBJKB_01034 Nicotinamide-nucleotide amidohydrolase PncC low > 73
Escherichia coli ECRC62 0.75 BNILDI_13940 fruA PTS fructose transporter subunit IIBC 0.65 BNILDI_11100 pncC nicotinamide-nucleotide amidase low > 75
Escherichia coli ECOR27 0.75 NOLOHH_15020 fruA PTS fructose transporter subunit IIBC 0.64 NOLOHH_12540 pncC nicotinamide-nucleotide amidase low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.75 GFF3773 PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) 0.65 GFF4694 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS low > 78
Pantoea sp. MT58 0.75 IAI47_06660 PTS fructose transporter subunit IIBC 0.64 IAI47_04295 nicotinamide-nucleotide amidase low > 76
Escherichia coli ECOR38 0.75 HEPCGN_22710 fruA PTS fructose transporter subunit IIBC 0.64 HEPCGN_19895 pncC nicotinamide-nucleotide amidase low > 87
Escherichia coli Nissle 1917 0.75 ECOLIN_RS12675 PTS fructose transporter subunit IIBC 0.65 ECOLIN_RS15065 nicotinamide-nucleotide amidase
Escherichia coli ECRC98 0.75 JDDGAC_27405 fruA PTS fructose transporter subunit IIBC 0.64 JDDGAC_24365 pncC nicotinamide-nucleotide amidase low > 86
Escherichia fergusonii Becca 0.75 EFB2_01690 PTS system fructose-specific EIIB'BC component 0.64 EFB2_01224 Nicotinamide-nucleotide amidohydrolase PncC low > 86
Escherichia coli ECRC101 0.75 MCAODC_14495 fruA PTS fructose transporter subunit IIBC 0.64 MCAODC_11225 pncC nicotinamide-nucleotide amidase low > 87
Escherichia coli ECRC99 0.75 KEDOAH_04740 fruA PTS fructose transporter subunit IIBC 0.64 KEDOAH_07435 pncC nicotinamide-nucleotide amidase
Enterobacter sp. TBS_079 0.75 MPMX20_03131 PTS system fructose-specific EIIB'BC component 0.62 MPMX20_03581 Nicotinamide-nucleotide amidohydrolase PncC low > 85
Escherichia coli ECRC102 0.75 NIAGMN_21210 fruA PTS fructose transporter subunit IIBC 0.64 NIAGMN_18470 pncC nicotinamide-nucleotide amidase
Enterobacter asburiae PDN3 0.75 EX28DRAFT_0396 PTS system, fructose-specific, IIB component/PTS system, fructose subfamily, IIC component 0.62 EX28DRAFT_2786 amidohydrolase, PncC family low > 76
Escherichia coli ECRC100 0.75 OKFHMN_23445 fruA PTS fructose transporter subunit IIBC 0.64 OKFHMN_20700 pncC nicotinamide-nucleotide amidase low > 80
Escherichia coli BW25113 0.75 b2167 fruA fused fructose-specific PTS enzymes: IIBcomponent/IIC components (NCBI) 0.65 b2700 ygaD competence damage-inducible protein A (NCBI) low > 76
Klebsiella michiganensis M5al 0.74 BWI76_RS19725 PTS fructose transporter subunit EIIBC 0.61 BWI76_RS22185 hypothetical protein 0.21 5
Rahnella sp. WP5 0.74 EX31_RS19065 PTS fructose transporter subunit IIBC 0.61 EX31_RS07805 nicotinamide-nucleotide amidase low > 89
Erwinia tracheiphila SCR3 0.73 LU632_RS17315 fruA PTS fructose transporter subunit IIBC 0.57 LU632_RS15740 pncC nicotinamide-nucleotide amidase low > 74
Vibrio cholerae E7946 ATCC 55056 0.59 CSW01_16820 PTS fructose transporter subunit IIBC 0.44 CSW01_02870 CinA family protein low > 62
Pseudomonas fluorescens GW456-L13 0.55 PfGW456L13_5073 PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) 0.40 PfGW456L13_4669 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS low > 87
Pseudomonas sp. RS175 0.55 PFR28_00107 hypothetical protein 0.40 PFR28_00471 Nicotinamide-nucleotide amidohydrolase PncC low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.55 Psyr_0823 PTS system D-fructose-specific IIB component (F1P-forming), Frc family / PTS system D-fructose-specific IIC component (F1P-forming), Frc family 0.42 Psyr_1377 CinA, C-terminal low > 86
Pseudomonas syringae pv. syringae B728a 0.55 Psyr_0823 PTS system D-fructose-specific IIB component (F1P-forming), Frc family / PTS system D-fructose-specific IIC component (F1P-forming), Frc family 0.42 Psyr_1377 CinA, C-terminal low > 86
Pseudomonas fluorescens FW300-N2E2 0.55 Pf6N2E2_3337 PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) 0.40 Pf6N2E2_2994 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS low > 103
Pseudomonas fluorescens FW300-N1B4 0.54 Pf1N1B4_1144 PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) 0.42 Pf1N1B4_3142 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS low > 87
Pseudomonas fluorescens FW300-N2E3 0.54 AO353_05475 PTS fructose transporter subunit IIBC 0.42 AO353_16800 damage-inducible protein CinA low > 101
Pseudomonas stutzeri RCH2 0.54 Psest_3353 PTS system, fructose-specific, IIB component/PTS system, fructose subfamily, IIC component 0.46 Psest_2873 competence/damage-inducible protein CinA C-terminal domain low > 67
Marinobacter adhaerens HP15 0.53 HP15_3725 PTS system, fructose-specific IIBC component 0.49 HP15_1046 competence damage-inducible protein A low > 73
Pseudomonas fluorescens SBW25 0.53 PFLU_RS04020 PTS fructose-like transporter subunit IIB 0.42 PFLU_RS05880 CinA family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS04020 PTS fructose-like transporter subunit IIB 0.42 PFLU_RS05880 CinA family protein low > 109
Pseudomonas fluorescens FW300-N2C3 0.53 AO356_07325 fructose phosphotransferase system, IIB/IIC components (EC 2.7.1.202) (from data) 0.42 AO356_05675 damage-inducible protein CinA low > 104
Pseudomonas simiae WCS417 0.51 PS417_03975 FruA 0.42 PS417_05810 damage-inducible protein CinA low > 88
Pseudomonas putida KT2440 0.49 PP_0795 fructose PTS permease - IIBC component 0.41 PP_1628 NMN amidohydrolase low > 96
Ralstonia sp. UNC404CL21Col 0.45 ABZR87_RS02050 fructose-specific PTS transporter subunit EIIC 0.44 ABZR87_RS01580 CinA family protein low > 80
Paraburkholderia graminis OAS925 0.45 ABIE53_004213 PTS system fructose-specific IIC component 0.43 ABIE53_003546 nicotinamide-nucleotide amidase 0.16 101
Azospirillum brasilense Sp245 0.44 AZOBR_RS32335 fructose-specific PTS system (fructose 1-phosphate forming), EII-B'BC components (FruA) (from data) 0.41 AZOBR_RS14405 competence damage-inducible protein A low > 97
Ralstonia solanacearum GMI1000 0.44 RS_RS14320 PTS fructose transporter subunit IIBC 0.43 RS_RS13860 CinA family protein
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.2174.1 hypothetical protein 0.47 Xcc-8004.3118.1 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS 0.34 42
Ralstonia solanacearum PSI07 0.42 RPSI07_RS10870 PTS fructose transporter subunit IIBC 0.44 RPSI07_RS11330 CinA family protein
Ralstonia solanacearum UW163 0.42 UW163_RS07255 PTS fructose transporter subunit IIBC 0.44 UW163_RS07710 CinA family protein
Ralstonia solanacearum IBSBF1503 0.42 RALBFv3_RS06370 PTS fructose transporter subunit IIBC 0.44 RALBFv3_RS05915 CinA family protein low > 76
Azospirillum sp. SherDot2 0.42 MPMX19_05329 PTS system fructose-specific EIIB'BC component 0.39 MPMX19_01107 Nicotinamide-nucleotide amidohydrolase PncC low > 112

Not shown: 0 genomes with orthologs for HER17_RS12855 only; 33 genomes with orthologs for HER17_RS05040 only