Conservation of cofitness between HER17_RS12935 and HER17_RS00620 in Pectobacterium carotovorum WPP14

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12935 microcin C ABC transporter ATP-binding protein YejF 1.0 HER17_RS00620 sn-glycerol-3-phosphate ABC transporter permease UgpE 0.55 12
Dickeya dadantii 3937 0.76 DDA3937_RS09175 microcin C ABC transporter ATP-binding protein YejF 0.86 DDA3937_RS00730 sn-glycerol-3-phosphate ABC transporter permease UgpE low > 74
Dickeya dianthicola 67-19 0.75 HGI48_RS09215 microcin C ABC transporter ATP-binding protein YejF 0.82 HGI48_RS20640 sn-glycerol-3-phosphate ABC transporter permease UgpE low > 71
Dickeya dianthicola ME23 0.75 DZA65_RS09520 microcin C ABC transporter ATP-binding protein YejF 0.82 DZA65_RS21655 sn-glycerol-3-phosphate ABC transporter permease UgpE low > 75
Klebsiella michiganensis M5al 0.72 BWI76_RS19795 microcin C ABC transporter ATP-binding protein YejF 0.82 BWI76_RS26295 glycerol-3-phosphate transporter membrane protein low > 92
Enterobacter sp. TBS_079 0.72 MPMX20_03146 putative ABC transporter ATP-binding protein YejF 0.82 MPMX20_04327 Lactose transport system permease protein LacG low > 85
Rahnella sp. WP5 0.72 EX31_RS19145 microcin C ABC transporter ATP-binding protein YejF 0.83 EX31_RS14750 sn-glycerol-3-phosphate ABC transporter permease UgpE low > 89
Enterobacter asburiae PDN3 0.72 EX28DRAFT_0381 ABC-type uncharacterized transport system, duplicated ATPase component 0.83 EX28DRAFT_4283 ABC-type sugar transport system, permease component low > 76
Escherichia coli BW25113 0.70 b2180 yejF fused predicted oligopeptide transporter subunits of ABC superfamilly: ATP-binding components (NCBI) 0.80 b3451 ugpE glycerol-3-phosphate transporter subunit (NCBI) low > 76
Escherichia coli ECRC98 0.70 JDDGAC_27335 yejF microcin C ABC transporter ATP-binding protein YejF 0.81 JDDGAC_20410 ugpE sn-glycerol-3-phosphate ABC transporter permease UgpE low > 86
Escherichia coli ECRC100 0.70 OKFHMN_23375 yejF microcin C ABC transporter ATP-binding protein YejF 0.81 OKFHMN_16780 ugpE sn-glycerol-3-phosphate ABC transporter permease UgpE low > 80
Escherichia coli ECRC102 0.70 NIAGMN_21140 yejF microcin C ABC transporter ATP-binding protein YejF 0.81 NIAGMN_14550 ugpE sn-glycerol-3-phosphate ABC transporter permease UgpE — —
Escherichia coli ECRC101 0.70 MCAODC_14425 yejF microcin C ABC transporter ATP-binding protein YejF 0.81 MCAODC_07310 ugpE sn-glycerol-3-phosphate ABC transporter permease UgpE low > 87
Escherichia coli ECRC99 0.70 KEDOAH_04810 yejF microcin C ABC transporter ATP-binding protein YejF 0.81 KEDOAH_11360 ugpE sn-glycerol-3-phosphate ABC transporter permease UgpE — —
Escherichia coli ECOR27 0.70 NOLOHH_14950 yejF microcin C ABC transporter ATP-binding protein YejF 0.81 NOLOHH_08570 ugpE sn-glycerol-3-phosphate ABC transporter permease UgpE low > 75
Escherichia coli ECRC62 0.70 BNILDI_13870 yejF microcin C ABC transporter ATP-binding protein YejF 0.81 BNILDI_02935 ugpE sn-glycerol-3-phosphate ABC transporter permease UgpE low > 75
Escherichia coli Nissle 1917 0.70 ECOLIN_RS12745 microcin C ABC transporter ATP-binding protein YejF 0.81 ECOLIN_RS19735 sn-glycerol-3-phosphate ABC transporter permease UgpE low > 55
Escherichia fergusonii Becca 0.70 EFB2_01676 putative ABC transporter ATP-binding protein YejF 0.81 EFB2_00371 Lactose transport system permease protein LacG low > 86
Escherichia coli ECOR38 0.70 HEPCGN_22640 yejF microcin C ABC transporter ATP-binding protein YejF 0.81 HEPCGN_15600 ugpE sn-glycerol-3-phosphate ABC transporter permease UgpE low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.70 OHPLBJKB_01529 putative ABC transporter ATP-binding protein YejF 0.81 OHPLBJKB_00252 Lactose transport system permease protein LacG low > 73
Escherichia coli BL21 0.70 ECD_02110 microcin C ABC transporter ATPase 0.81 ECD_03300 sn-glycerol-3-phosphate ABC transporter permease low > 61
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.69 GFF3756 Putative ABC transporter ATP-binding protein 0.83 GFF557 Glycerol-3-phosphate ABC transporter, permease protein UgpE (TC 3.A.1.1.3) low > 78
Serratia liquefaciens MT49 0.68 IAI46_17330 microcin C ABC transporter ATP-binding protein YejF 0.85 IAI46_01000 sn-glycerol-3-phosphate ABC transporter permease UgpE low > 86
Pantoea sp. MT58 0.67 IAI47_06600 microcin C ABC transporter ATP-binding protein YejF 0.81 IAI47_01600 sn-glycerol-3-phosphate ABC transporter permease UgpE low > 76
Vibrio cholerae E7946 ATCC 55056 0.60 CSW01_17170 ABC transporter ATP-binding protein 0.47 CSW01_07795 sn-glycerol-3-phosphate ABC transporter permease UgpE low > 62
Pseudomonas syringae pv. syringae B728a 0.57 Psyr_1755 ABC transporter 0.40 Psyr_4504 carbohydrate ABC transporter membrane protein 2, CUT1 family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.57 Psyr_1755 ABC transporter 0.40 Psyr_4504 carbohydrate ABC transporter membrane protein 2, CUT1 family low > 86
Rhizobium sp. OAE497 0.56 ABIE40_RS00630 ABC transporter ATP-binding protein 0.59 ABIE40_RS20845 sn-glycerol-3-phosphate ABC transporter permease UgpE low > 107
Sinorhizobium meliloti 1021 0.56 SMc02829 ABC transporter ATP-binding protein 0.59 SM_b20418 glycerol-3-phosphate ABC transporter permease — —
Bosea sp. OAE506 0.56 ABIE41_RS23985 ABC transporter ATP-binding protein 0.58 ABIE41_RS03460 sn-glycerol-3-phosphate ABC transporter permease UgpE low > 77
Azospirillum brasilense Sp245 0.55 AZOBR_RS03800 microcin ABC transporter ATP-binding protein 0.60 AZOBR_RS00065 glycerol-3-phosphate transporter membrane protein low > 97
Agrobacterium fabrum C58 0.55 Atu0190 ABC transporter, nucleotide binding/ATPase protein (peptide) 0.58 Atu3187 glycerol-3-phosphate ABC transporter permease low > 89
Dinoroseobacter shibae DFL-12 0.55 Dshi_0658 ABC transporter related (RefSeq) 0.60 Dshi_2016 binding-protein-dependent transport systems inner membrane component (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.54 PGA1_c30150 oligopeptide/dipeptide ABC transporter, ATP-binding protein 0.43 PGA1_c02730 sn-glycerol-3-phosphate transport system permease protein UgpE low > 62
Rhodopseudomonas palustris CGA009 0.54 TX73_019110 ABC transporter ATP-binding protein 0.59 TX73_000290 sn-glycerol-3-phosphate ABC transporter permease UgpE low > 86
Azospirillum sp. SherDot2 0.53 MPMX19_02171 putative ABC transporter ATP-binding protein YejF 0.58 MPMX19_00485 L-arabinose transport system permease protein AraQ low > 112
Cupriavidus basilensis FW507-4G11 0.48 RR42_RS13370 microcin ABC transporter ATP-binding protein 0.64 RR42_RS12960 glycerol-3-phosphate transporter membrane protein low > 128
Ralstonia sp. UNC404CL21Col 0.45 ABZR87_RS10695 ABC transporter ATP-binding protein 0.64 ABZR87_RS11095 sn-glycerol-3-phosphate ABC transporter permease UgpE low > 80
Ralstonia solanacearum GMI1000 0.45 RS_RS05865 ABC transporter ATP-binding protein 0.62 RS_RS06345 sn-glycerol-3-phosphate ABC transporter permease UgpE low > 80
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_00563 microcin C transport system ATP-binding protein 0.76 H281DRAFT_05702 glycerol 3-phosphate ABC transporter membrane protein low > 103
Ralstonia solanacearum PSI07 0.45 RPSI07_RS18325 ABC transporter ATP-binding protein 0.67 RPSI07_RS17790 sn-glycerol-3-phosphate ABC transporter permease UgpE low > 81
Ralstonia solanacearum UW163 0.44 UW163_RS12520 ABC transporter ATP-binding protein 0.66 UW163_RS13025 sn-glycerol-3-phosphate ABC transporter permease UgpE — —
Ralstonia solanacearum IBSBF1503 0.44 RALBFv3_RS15050 ABC transporter ATP-binding protein 0.66 RALBFv3_RS15565 sn-glycerol-3-phosphate ABC transporter permease UgpE low > 76
Burkholderia phytofirmans PsJN 0.44 BPHYT_RS12370 ABC transporter 0.71 BPHYT_RS17465 glycerol-3-phosphate transporter membrane protein low > 109
Paraburkholderia graminis OAS925 0.44 ABIE53_002547 microcin C transport system ATP-binding protein 0.72 ABIE53_003653 sn-glycerol 3-phosphate transport system permease protein low > 113
Herbaspirillum seropedicae SmR1 0.44 HSERO_RS17130 ABC transporter 0.58 HSERO_RS18945 glycerol-3-phosphate transporter membrane protein low > 78
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS06185 dipeptide ABC transporter ATP-binding protein 0.71 QEN71_RS27615 sn-glycerol-3-phosphate ABC transporter permease UgpE low > 153
Variovorax sp. OAS795 0.42 ABID97_RS16505 dipeptide ABC transporter ATP-binding protein 0.61 ABID97_RS07220 sn-glycerol-3-phosphate ABC transporter permease UgpE low > 91

Not shown: 19 genomes with orthologs for HER17_RS12935 only; 5 genomes with orthologs for HER17_RS00620 only