Conservation of cofitness between HEPCGN_05285 and HEPCGN_16350 in Escherichia coli ECOR38

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR38 1.0 HEPCGN_05285 astB N-succinylarginine dihydrolase 1.0 HEPCGN_16350 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB 0.71 9
Escherichia coli BW25113 0.98 b1745 astB succinylarginine dihydrolase (NCBI) 0.99 b3289 rsmB 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent (NCBI) low > 76
Escherichia coli ECRC100 0.98 OKFHMN_26920 astB N-succinylarginine dihydrolase 0.99 OKFHMN_17520 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 80
Escherichia coli ECRC99 0.98 KEDOAH_01190 astB N-succinylarginine dihydrolase 0.99 KEDOAH_10620 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB — —
Escherichia coli ECRC101 0.98 MCAODC_18490 astB N-succinylarginine dihydrolase 0.99 MCAODC_08050 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 87
Escherichia coli BL21 0.98 ECD_01714 succinylarginine dihydrolase 0.99 ECD_03139 16S rRNA m(5)C967 methyltransferase, SAM-dependent — —
Escherichia coli ECRC98 0.98 JDDGAC_01495 astB N-succinylarginine dihydrolase 0.99 JDDGAC_21150 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 86
Escherichia coli ECRC102 0.98 NIAGMN_01145 astB N-succinylarginine dihydrolase 0.99 NIAGMN_15290 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.97 OHPLBJKB_01987 N-succinylarginine dihydrolase 0.99 OHPLBJKB_00415 Ribosomal RNA small subunit methyltransferase B 0.40 34
Escherichia coli ECOR27 0.97 NOLOHH_17435 astB N-succinylarginine dihydrolase 0.99 NOLOHH_09320 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 75
Escherichia coli ECRC62 0.97 BNILDI_16220 astB N-succinylarginine dihydrolase 0.99 BNILDI_02200 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 75
Escherichia coli Nissle 1917 0.95 ECOLIN_RS09730 N-succinylarginine dihydrolase 1.00 ECOLIN_RS18875 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 55
Escherichia fergusonii Becca 0.95 EFB2_02248 N-succinylarginine dihydrolase 1.00 EFB2_00535 Ribosomal RNA small subunit methyltransferase B low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.85 GFF3495 Succinylarginine dihydrolase (EC 3.5.3.23) 0.90 GFF2390 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) ## SSU rRNA m5C967 low > 78
Enterobacter asburiae PDN3 0.78 EX28DRAFT_1749 succinylarginine dihydrolase (EC 3.5.3.23) 0.87 EX28DRAFT_0039 16S rRNA (cytosine(967)-C(5))-methyltransferase low > 76
Enterobacter sp. TBS_079 0.78 MPMX20_01868 N-succinylarginine dihydrolase 0.86 MPMX20_04196 Ribosomal RNA small subunit methyltransferase B low > 85
Klebsiella michiganensis M5al 0.74 BWI76_RS11685 Succinylarginine dihydrolase (EC 3.5.3.23) (from data) 0.90 BWI76_RS25680 16S rRNA m5C967 methyltransferase low > 92
Pantoea sp. MT58 0.71 IAI47_11080 N-succinylarginine dihydrolase 0.72 IAI47_02280 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 76
Serratia liquefaciens MT49 0.68 IAI46_15320 N-succinylarginine dihydrolase 0.74 IAI46_23275 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 86
Rahnella sp. WP5 0.60 EX31_RS17395 N-succinylarginine dihydrolase 0.71 EX31_RS15985 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 89
Acinetobacter radioresistens SK82 0.59 MPMX26_02248 N-succinylarginine dihydrolase 0.33 MPMX26_03021 Ribosomal RNA small subunit methyltransferase B low > 36
Pseudomonas putida KT2440 0.58 PP_4477 N-succinylarginine dihydrolase 0.41 PP_0066 Ribosomal RNA small subunit methyltransferase B low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.57 Psyr_3561 succinylarginine dihydrolase 0.41 Psyr_0017 16S rRNA m(5)C-967 methyltransferase low > 86
Pseudomonas syringae pv. syringae B728a 0.57 Psyr_3561 succinylarginine dihydrolase 0.41 Psyr_0017 16S rRNA m(5)C-967 methyltransferase low > 86
Pseudomonas sp. S08-1 0.56 OH686_21310 succinylarginine dihydrolase 0.42 OH686_12525 16S rRNA (cytosine(967)-C(5))-methyltransferase low > 80
Pseudomonas fluorescens FW300-N2E3 0.56 AO353_03005 succinylarginine dihydrolase 0.41 AO353_10630 16S rRNA methyltransferase low > 101
Pseudomonas simiae WCS417 0.56 PS417_21690 N-succinylarginine dihydrolase 0.41 PS417_00085 16S rRNA methyltransferase low > 88
Paraburkholderia graminis OAS925 0.55 ABIE53_001773 succinylarginine dihydrolase 0.31 ABIE53_000392 16S rRNA (cytosine967-C5)-methyltransferase — —
Pseudomonas sp. RS175 0.55 PFR28_03279 N-succinylarginine dihydrolase 0.41 PFR28_04663 Ribosomal RNA small subunit methyltransferase B low > 88
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_18745 succinylarginine dihydrolase 0.41 AO356_11275 16S rRNA methyltransferase 0.23 58
Paraburkholderia bryophila 376MFSha3.1 0.55 H281DRAFT_06482 succinylarginine dihydrolase 0.31 H281DRAFT_02237 16S rRNA (cytosine967-C5)-methyltransferase — —
Shewanella amazonensis SB2B 0.55 Sama_1321 Succinylarginine dihydrolase (EC 3.5.3.23) (from data) 0.47 Sama_0041 sun protein (RefSeq) 0.22 46
Pseudomonas fluorescens GW456-L13 0.55 PfGW456L13_1975 Succinylarginine dihydrolase (EC 3.5.3.23) 0.40 PfGW456L13_652 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) low > 87
Pseudomonas fluorescens FW300-N2E2 0.55 Pf6N2E2_5669 Succinylarginine dihydrolase (EC 3.5.3.23) 0.41 Pf6N2E2_4121 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) low > 103
Pseudomonas fluorescens FW300-N1B4 0.55 Pf1N1B4_3445 Succinylarginine dihydrolase (EC 3.5.3.23) 0.40 Pf1N1B4_1914 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) low > 87
Paraburkholderia sabiae LMG 24235 0.55 QEN71_RS23355 N-succinylarginine dihydrolase 0.32 QEN71_RS00175 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB — —
Pseudomonas fluorescens SBW25 0.54 PFLU_RS23295 N-succinylarginine dihydrolase 0.41 PFLU_RS00080 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 109
Pseudomonas fluorescens SBW25-INTG 0.54 PFLU_RS23295 N-succinylarginine dihydrolase 0.41 PFLU_RS00080 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 109
Burkholderia phytofirmans PsJN 0.54 BPHYT_RS07715 N-succinylarginine dihydrolase 0.31 BPHYT_RS01475 16S rRNA methyltransferase — —
Shewanella loihica PV-4 0.53 Shew_2225 succinylarginine dihydrolase (RefSeq) 0.48 Shew_3738 sun protein (RefSeq) low > 60
Shewanella sp. ANA-3 0.53 Shewana3_1728 Succinylarginine dihydrolase (EC 3.5.3.23) (from data) 0.48 Shewana3_0033 sun protein (RefSeq) low > 73
Marinobacter adhaerens HP15 0.53 HP15_3038 N-succinylarginine dihydrolase 0.40 HP15_3742 Fmu, rRNA SAM-dependent methyltransferase low > 73
Alteromonas macleodii MIT1002 0.52 MIT1002_01704 N-succinylarginine dihydrolase 0.43 MIT1002_00018 Ribosomal RNA small subunit methyltransferase B low > 70
Shewanella oneidensis MR-1 0.52 SO2706 astB Succinylarginine dihydrolase (EC 3.5.3.23) (from data) 0.48 SO0030 sun sun protein (NCBI ptt file) low > 76
Kangiella aquimarina DSM 16071 0.52 B158DRAFT_2218 succinylarginine dihydrolase (EC 3.5.3.23) 0.35 B158DRAFT_0396 ribosomal RNA small subunit methyltransferase RsmB low > 40
Brevundimonas sp. GW460-12-10-14-LB2 0.43 A4249_RS02840 N-succinylarginine dihydrolase 0.15 A4249_RS13165 RsmB/NOP family class I SAM-dependent RNA methyltransferase low > 48
Caulobacter crescentus NA1000 Δfur 0.43 CCNA_01680 succinylarginine dihydrolase 0.22 CCNA_00101 16S rRNA m5C methyltransferase RsmB low > 67
Caulobacter crescentus NA1000 0.43 CCNA_01680 succinylarginine dihydrolase 0.22 CCNA_00101 16S rRNA m5C methyltransferase RsmB low > 66

Not shown: 1 genomes with orthologs for HEPCGN_05285 only; 38 genomes with orthologs for HEPCGN_16350 only