Conservation of cofitness between PS417_25330 and PS417_04430 in Pseudomonas simiae WCS417

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_25330 hypothetical protein 1.0 PS417_04430 uracil transporter 0.17 20
Pseudomonas fluorescens SBW25-INTG 0.94 PFLU_RS26970 endonuclease/exonuclease/phosphatase family protein 0.99 PFLU_RS04480 uracil-xanthine permease low > 109
Pseudomonas fluorescens SBW25 0.94 PFLU_RS26970 endonuclease/exonuclease/phosphatase family protein 0.99 PFLU_RS04480 uracil-xanthine permease low > 109
Pseudomonas fluorescens GW456-L13 0.78 PfGW456L13_1295 Endonuclease/Exonuclease/phosphatase family protein 0.97 PfGW456L13_1596 Uracil permease low > 87
Pseudomonas fluorescens FW300-N2C3 0.78 AO356_14850 hypothetical protein 0.95 AO356_16560 uracil transporter low > 104
Pseudomonas fluorescens FW300-N2E2 0.78 Pf6N2E2_4902 Endonuclease/Exonuclease/phosphatase family protein 0.95 Pf6N2E2_5234 Uracil permease low > 103
Pseudomonas fluorescens FW300-N1B4 0.77 Pf1N1B4_2631 Endonuclease/Exonuclease/phosphatase family protein 0.95 Pf1N1B4_2933 Uracil permease low > 87
Pseudomonas sp. RS175 0.75 PFR28_03965 hypothetical protein 0.91 PFR28_03642 Uracil permease low > 88
Pseudomonas syringae pv. syringae B728a 0.64 Psyr_3278 Endonuclease/exonuclease/phosphatase 0.93 Psyr_0968 Xanthine/uracil permease family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.64 Psyr_3278 Endonuclease/exonuclease/phosphatase 0.93 Psyr_0968 Xanthine/uracil permease family low > 86
Pseudomonas sp. S08-1 0.64 OH686_01325 Endonuclease/exonuclease/phosphatase family protein 0.78 OH686_17980 Uracil permease or Uracil:proton symporter UraA low > 80
Variovorax sp. OAS795 0.63 ABID97_RS02730 endonuclease/exonuclease/phosphatase family protein 0.27 ABID97_RS03010 solute carrier family 23 protein low > 91
Pseudomonas putida KT2440 0.63 PP_3265 putative phosphohydrolase of unknown function 0.91 PP_0745 putative uracil permease low > 96
Variovorax sp. SCN45 0.62 GFF3295 Endonuclease/exonuclease/phosphatase family protein 0.27 GFF3368 Pyrimidine permease low > 127
Pseudomonas stutzeri RCH2 0.62 Psest_2161 Metal-dependent hydrolase 0.76 Psest_1119 uracil-xanthine permease low > 67
Dickeya dadantii 3937 0.59 DDA3937_RS08620 endonuclease/exonuclease/phosphatase family protein 0.34 DDA3937_RS06035 uracil permease low > 74
Dickeya dianthicola ME23 0.59 DZA65_RS09050 endonuclease/exonuclease/phosphatase family protein 0.33 DZA65_RS06430 uracil permease low > 75
Dickeya dianthicola 67-19 0.59 HGI48_RS08760 endonuclease/exonuclease/phosphatase family protein 0.33 HGI48_RS06080 uracil permease low > 71
Pantoea sp. MT58 0.57 IAI47_13445 endonuclease/exonuclease/phosphatase family protein 0.34 IAI47_05190 uracil permease low > 76
Escherichia coli ECRC99 0.57 KEDOAH_21585 ybhP Uncharacterized protein YbhP 0.34 KEDOAH_06400 uraA uracil permease — —
Escherichia coli ECOR38 0.57 HEPCGN_01715 ybhP Uncharacterized protein YbhP 0.34 HEPCGN_20985 uraA uracil permease low > 85
Escherichia coli ECRC102 0.57 NIAGMN_04370 ybhP Uncharacterized protein YbhP 0.34 NIAGMN_19590 uraA uracil permease — —
Escherichia coli ECRC101 0.57 MCAODC_25540 ybhP Uncharacterized protein YbhP 0.34 MCAODC_12350 uraA uracil permease — —
Escherichia coli BW25113 0.57 b0790 ybhP predicted DNase (NCBI) 0.34 b2497 uraA uracil transporter (NCBI) low > 76
Escherichia coli ECRC101 0.57 OKFHMN_06325 ybhP Uncharacterized protein YbhP 0.34 OKFHMN_21820 uraA uracil permease — —
Escherichia coli Nissle 1917 0.57 ECOLIN_RS04210 endonuclease/exonuclease/phosphatase family protein 0.34 ECOLIN_RS14180 uracil permease — —
Rahnella sp. WP5 0.57 EX31_RS02835 endonuclease/exonuclease/phosphatase family protein 0.35 EX31_RS22705 uracil permease low > 89
Escherichia coli ECRC98 0.57 JDDGAC_09960 ybhP Uncharacterized protein YbhP 0.34 JDDGAC_25765 uraA uracil permease — —
Escherichia coli ECOR27 0.57 NOLOHH_22680 ybhP Uncharacterized protein YbhP 0.34 NOLOHH_13470 uraA uracil permease low > 57
Escherichia coli HS(pFamp)R (ATCC 700891) 0.56 OHPLBJKB_02923 hypothetical protein 0.34 OHPLBJKB_01229 Uracil permease low > 73
Escherichia coli BL21 0.56 ECD_00757 endo/exonuclease/phosphatase family protein 0.34 ECD_02389 uracil permease low > 60
Escherichia coli ECRC62 0.56 BNILDI_20960 ybhP Uncharacterized protein YbhP 0.34 BNILDI_12280 uraA uracil permease — —
Escherichia fergusonii Becca 0.56 EFB2_03315 hypothetical protein 0.34 EFB2_01401 Uracil permease low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.56 GFF689 Endonuclease/Exonuclease/phosphatase family protein 0.34 GFF2172 Uracil permease low > 78
Klebsiella michiganensis M5al 0.55 BWI76_RS08855 endonuclease/exonuclease/phosphatase 0.35 BWI76_RS20940 uracil/xanthine transporter low > 92
Enterobacter asburiae PDN3 0.55 EX28DRAFT_2201 Metal-dependent hydrolase 0.34 EX28DRAFT_0171 uracil-xanthine permease low > 76
Enterobacter sp. TBS_079 0.55 MPMX20_01418 hypothetical protein 0.35 MPMX20_03351 Uracil permease low > 85
Hydrogenophaga sp. GW460-11-11-14-LB1 0.47 GFF5689 Endonuclease/Exonuclease/phosphatase family protein 0.27 GFF2000 Uracil permease low > 90
Dechlorosoma suillum PS 0.46 Dsui_1042 metal-dependent hydrolase 0.55 Dsui_2332 uracil-xanthine permease low > 51
Herbaspirillum seropedicae SmR1 0.36 HSERO_RS01170 metal-dependent hydrolase 0.25 HSERO_RS18085 pyrimidine permease low > 78
Cupriavidus basilensis FW507-4G11 0.35 RR42_RS02475 endonuclease 0.25 RR42_RS04530 pyrimidine permease low > 128
Acidovorax sp. GW101-3H11 0.30 Ac3H11_4811 Endonuclease/exonuclease/phosphatase 0.27 Ac3H11_4891 Uracil permease low > 79
Castellaniella sp019104865 MT123 0.28 ABCV34_RS13210 endonuclease/exonuclease/phosphatase family protein 0.26 ABCV34_RS15535 solute carrier family 23 protein low > 48
Burkholderia phytofirmans PsJN 0.20 BPHYT_RS01840 endonuclease 0.28 BPHYT_RS01995 pyrimidine permease — —
Paraburkholderia sabiae LMG 24235 0.20 QEN71_RS00555 endonuclease/exonuclease/phosphatase family protein 0.27 QEN71_RS00925 solute carrier family 23 protein — —
Paraburkholderia graminis OAS925 0.20 ABIE53_000452 endonuclease/exonuclease/phosphatase family metal-dependent hydrolase 0.28 ABIE53_000545 putative pyrimidine permease RutG low > 113
Paraburkholderia bryophila 376MFSha3.1 0.20 H281DRAFT_02170 Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family 0.28 H281DRAFT_02126 uracil-xanthine permease low > 103
Azospirillum brasilense Sp245 0.17 AZOBR_RS02465 endonuclease 0.30 AZOBR_RS31675 uracil transporter low > 97
Azospirillum sp. SherDot2 0.15 MPMX19_05699 hypothetical protein 0.26 MPMX19_02961 Putative pyrimidine permease RutG low > 112
Serratia liquefaciens MT49 0.14 IAI46_12355 endonuclease/exonuclease/phosphatase family protein 0.36 IAI46_18875 uracil permease low > 86
Bosea sp. OAE506 0.12 ABIE41_RS18570 endonuclease/exonuclease/phosphatase family protein 0.25 ABIE41_RS13010 uracil-xanthine permease family protein low > 77
Agrobacterium fabrum C58 0.11 Atu2485 hypothetical protein 0.28 Atu3076 uracil transport protein low > 89

Not shown: 16 genomes with orthologs for PS417_25330 only; 17 genomes with orthologs for PS417_04430 only