| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 1.0 | GFF518 | | Transcriptional regulator | 1.0 | GFF781 | | Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) | 0.82 | 8 |
| Variovorax sp. SCN45 | 0.75 | GFF4595 | | Transcriptional regulator | 0.82 | GFF6030 | | Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) | low | > 127 |
| Acidovorax sp. GW101-3H11 | 0.75 | Ac3H11_1953 | | Transcriptional regulator | 0.85 | Ac3H11_1692 | | ABC transporter for glutamine/isoleucine/leucine/phenylalanine/proline/serine/tyrosine, ATPase component 2 (from data) | 0.33 | 10 |
| Variovorax sp. OAS795 | 0.74 | ABID97_RS05925 | | LysR substrate-binding domain-containing protein | 0.82 | ABID97_RS07855 | | ABC transporter ATP-binding protein | 0.26 | 85 |
| Herbaspirillum seropedicae SmR1 | 0.60 | HSERO_RS19265 | | LysR family transcriptional regulator | 0.72 | HSERO_RS05975 | | amino acid ABC transporter ATPase | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.57 | RR42_RS02565 | | LysR family transcriptional regulator | 0.81 | RR42_RS16960 | | ABC transporter ATP-binding protein | low | > 128 |
| Ralstonia solanacearum IBSBF1503 | 0.57 | RALBFv3_RS11545 | | LysR family transcriptional regulator | 0.80 | RALBFv3_RS04675 | | ABC transporter ATP-binding protein | low | > 76 |
| Ralstonia solanacearum UW163 | 0.57 | UW163_RS02040 | | LysR family transcriptional regulator | 0.80 | UW163_RS08995 | | ABC transporter ATP-binding protein | — | — |
| Ralstonia sp. UNC404CL21Col | 0.57 | ABZR87_RS07510 | | LysR family transcriptional regulator | 0.80 | ABZR87_RS00295 | | ABC transporter ATP-binding protein | low | > 80 |
| Paraburkholderia graminis OAS925 | 0.57 | ABIE53_003512 | | DNA-binding transcriptional LysR family regulator | 0.74 | ABIE53_003282 | | branched-chain amino acid transport system ATP-binding protein | 0.35 | 97 |
| Ralstonia solanacearum PSI07 | 0.57 | RPSI07_RS21665 | | LysR family transcriptional regulator | 0.80 | RPSI07_RS12710 | | ABC transporter ATP-binding protein | low | > 81 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.56 | H281DRAFT_04272 | | transcriptional regulator, LysR family | 0.74 | H281DRAFT_04059 | | amino acid/amide ABC transporter ATP-binding protein 2, HAAT family | — | — |
| Ralstonia solanacearum GMI1000 | 0.56 | RS_RS02375 | | LysR family transcriptional regulator | 0.80 | RS_RS12235 | | ABC transporter ATP-binding protein | low | > 80 |
| Burkholderia phytofirmans PsJN | 0.56 | BPHYT_RS16710 | | LysR family transcriptional regulator | 0.74 | BPHYT_RS15590 | | amino acid ABC transporter ATPase | low | > 109 |
| Paraburkholderia sabiae LMG 24235 | 0.55 | QEN71_RS26895 | | LysR substrate-binding domain-containing protein | 0.76 | QEN71_RS03120 | | ABC transporter ATP-binding protein | low | > 153 |
| Pseudomonas fluorescens FW300-N2C3 | 0.40 | AO356_01910 | | LysR family transcriptional regulator | 0.51 | AO356_08480 | | ABC transporter ATP-binding protein | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.39 | Pf6N2E2_2250 | | Transcriptional regulator | 0.51 | Pf6N2E2_3576 | | Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) | low | > 103 |
| Pseudomonas sp. RS175 | 0.36 | PFR28_04497 | | HTH-type transcriptional regulator YjiE | 0.51 | PFR28_05157 | | High-affinity branched-chain amino acid transport ATP-binding protein LivF | low | > 88 |
| Pseudomonas fluorescens SBW25 | 0.35 | PFLU_RS29810 | | LysR family transcriptional regulator | 0.52 | PFLU_RS02745 | | ABC transporter ATP-binding protein | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.35 | PFLU_RS29810 | | LysR family transcriptional regulator | 0.52 | PFLU_RS02745 | | ABC transporter ATP-binding protein | low | > 109 |
| Pseudomonas fluorescens FW300-N2E3 | 0.35 | AO353_09945 | | LysR family transcriptional regulator | 0.50 | AO353_13360 | | ABC transporter ATP-binding protein | low | > 101 |
| Pseudomonas fluorescens GW456-L13 | 0.35 | PfGW456L13_743 | | Transcriptional regulator | 0.51 | PfGW456L13_120 | | Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) | low | > 87 |
| Pseudomonas fluorescens FW300-N1B4 | 0.35 | Pf1N1B4_2026 | | Transcriptional regulator | 0.50 | Pf1N1B4_1378 | | Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) | low | > 87 |
| Pseudomonas simiae WCS417 | 0.35 | PS417_28125 | | LysR family transcriptional regulator | 0.52 | PS417_02675 | | ABC transporter ATP-binding protein | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.35 | Psyr_5050 | | transcriptional regulator, LysR family | 0.52 | Psyr_3849 | | L-isoleucine ABC transporter ATP-binding protein / L-leucine ABC transporter ATP-binding protein / L-valine ABC transporter ATP-binding protein | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.35 | Psyr_5050 | | transcriptional regulator, LysR family | 0.52 | Psyr_3849 | | L-isoleucine ABC transporter ATP-binding protein / L-leucine ABC transporter ATP-binding protein / L-valine ABC transporter ATP-binding protein | low | > 86 |
| Pseudomonas putida KT2440 | 0.35 | PP_5337 | | LysR family transcriptional regulator | 0.51 | PP_4863 | | high-affinity branched-chain amino acid transporter, ATP-binding | low | > 96 |
| Agrobacterium fabrum C58 | 0.34 | Atu2512 | | transcriptional regulator, LysR family | 0.51 | Atu2424 | | ABC transporter, nucleotide binding/ATPase protein | low | > 89 |
| Pseudomonas stutzeri RCH2 | 0.34 | Psest_4073 | | Transcriptional regulator | 0.50 | Psest_1308 | | ABC-type branched-chain amino acid transport systems, ATPase component | — | — |
| Pseudomonas sp. S08-1 | 0.33 | OH686_13320 | | LysR-family transcriptional regulator | 0.49 | OH686_04625 | | Branched-chain amino acid ABC transporter, ATP-binding protein LivF | low | > 80 |
| Sinorhizobium meliloti 1021 | 0.29 | SMa0097 | | LysR family transcriptional regulator | 0.51 | SMc01948 | | high-affinity branched-chain amino acid ABC transporter ATP-binding protein | low | > 103 |
| Rahnella sp. WP5 | 0.28 | EX31_RS05520 | | LysR family transcriptional regulator | 0.51 | EX31_RS15605 | | ABC transporter ATP-binding protein | low | > 89 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.25 | OHPLBJKB_03739 | | HTH-type transcriptional regulator YjiE | 0.47 | OHPLBJKB_00249 | | High-affinity branched-chain amino acid transport ATP-binding protein LivF | low | > 73 |
| Marinobacter adhaerens HP15 | 0.24 | HP15_205 | | protein containing bacterial regulatory protein, LysR domain | 0.50 | HP15_3059 | | high-affinity branched-chain amino acid ABC transporter, ATP-binding protein | 0.38 | 51 |
| Klebsiella michiganensis M5al | 0.20 | BWI76_RS17610 | | LysR family transcriptional regulator | 0.55 | BWI76_RS07265 | | ABC transporter ATP-binding protein | low | > 92 |
| Dickeya dianthicola 67-19 | 0.20 | HGI48_RS07255 | | hypochlorite stress DNA-binding transcriptional regulator HypT | 0.48 | HGI48_RS20710 | | high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF | low | > 71 |
| Dickeya dadantii 3937 | 0.19 | DDA3937_RS07390 | | hypochlorite stress DNA-binding transcriptional regulator HypT | 0.52 | DDA3937_RS18205 | | ABC transporter ATP-binding protein | low | > 74 |
Not shown: 14 genomes with orthologs for GFF518 only; 21 genomes with orthologs for GFF781 only