Conservation of cofitness between Psest_1866 and Psest_0063 in Pseudomonas stutzeri RCH2

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_1866 Uncharacterized protein conserved in bacteria 1.0 Psest_0063 tryptophan synthase, beta subunit 0.24 5
Pseudomonas sp. S08-1 0.74 OH686_20660 Inner membrane protein YbaN 0.87 OH686_12425 tryptophan synthase, beta subunit low > 80
Pseudomonas fluorescens SBW25 0.67 PFLU_RS21930 DUF454 domain-containing protein 0.85 PFLU_RS00180 tryptophan synthase subunit beta low > 109
Pseudomonas fluorescens SBW25-INTG 0.67 PFLU_RS21930 DUF454 domain-containing protein 0.85 PFLU_RS00180 tryptophan synthase subunit beta low > 109
Pseudomonas simiae WCS417 0.66 PS417_19960 membrane protein 0.85 PS417_00185 tryptophan synthase subunit beta low > 88
Pseudomonas fluorescens FW300-N2E3 0.65 AO353_18420 hypothetical protein 0.85 AO353_10710 tryptophan synthase subunit beta low > 101
Pseudomonas syringae pv. syringae B728a 0.65 Psyr_3740 Protein of unknown function DUF454 0.82 Psyr_0034 tryptophan synthase, beta chain low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.65 Psyr_3740 Protein of unknown function DUF454 0.82 Psyr_0034 tryptophan synthase, beta chain low > 86
Pseudomonas fluorescens GW456-L13 0.64 PfGW456L13_4425 FIG039061: hypothetical protein related to heme utilization 0.85 PfGW456L13_566 Tryptophan synthase beta chain (EC 4.2.1.20) low > 87
Pseudomonas fluorescens FW300-N2C3 0.64 AO356_04060 hypothetical protein 0.85 AO356_10915 tryptophan synthase subunit beta low > 104
Pseudomonas fluorescens FW300-N1B4 0.63 Pf1N1B4_3531 FIG039061: hypothetical protein related to heme utilization 0.85 Pf1N1B4_1831 Tryptophan synthase beta chain (EC 4.2.1.20) low > 87
Pseudomonas sp. RS175 0.63 PFR28_00786 Inner membrane protein YbaN 0.85 PFR28_04715 Tryptophan synthase beta chain — —
Pseudomonas putida KT2440 0.63 PP_4518 conserved protein of unknown function 0.83 PP_0083 tryptophan synthase beta chain low > 96
Pseudomonas fluorescens FW300-N2E2 0.62 Pf6N2E2_2647 FIG039061: hypothetical protein related to heme utilization 0.85 Pf6N2E2_4048 Tryptophan synthase beta chain (EC 4.2.1.20) low > 103
Enterobacter asburiae PDN3 0.33 EX28DRAFT_2490 Uncharacterized protein conserved in bacteria 0.53 EX28DRAFT_0933 tryptophan synthase, beta subunit low > 76
Enterobacter sp. TBS_079 0.33 MPMX20_01070 Inner membrane protein YbaN 0.53 MPMX20_02513 Tryptophan synthase beta chain low > 85
Escherichia coli Nissle 1917 0.32 ECOLIN_RS02785 DUF454 family protein 0.51 ECOLIN_RS07600 tryptophan synthase subunit beta — —
Escherichia fergusonii Becca 0.32 EFB2_03590 Inner membrane protein YbaN 0.51 EFB2_02665 Tryptophan synthase beta chain low > 86
Klebsiella michiganensis M5al 0.32 BWI76_RS06810 hypothetical protein 0.52 BWI76_RS11845 tryptophan synthase subunit beta low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.32 GFF4386 FIG039061: hypothetical protein related to heme utilization 0.53 GFF2725 Tryptophan synthase beta chain (EC 4.2.1.20) low > 78
Vibrio cholerae E7946 ATCC 55056 0.32 CSW01_05355 DUF454 domain-containing protein 0.52 CSW01_05930 tryptophan synthase subunit beta low > 62
Escherichia coli ECRC100 0.32 OKFHMN_08175 ybaN DUF454 domain-containing protein 0.51 OKFHMN_02670 trpB tryptophan synthase subunit beta low > 80
Escherichia coli BW25113 0.32 b0468 ybaN conserved inner membrane protein (NCBI) 0.51 b1261 trpB tryptophan synthase subunit beta (NCBI) low > 76
Escherichia coli ECRC98 0.32 JDDGAC_11825 ybaN DUF454 domain-containing protein 0.51 JDDGAC_05215 trpB tryptophan synthase subunit beta low > 86
Escherichia coli ECOR38 0.32 HEPCGN_06790 ybaN DUF454 domain-containing protein 0.51 HEPCGN_25520 trpB tryptophan synthase subunit beta low > 87
Escherichia coli ECOR27 0.32 NOLOHH_01105 ybaN DUF454 domain-containing protein 0.51 NOLOHH_20330 trpB tryptophan synthase subunit beta low > 75
Escherichia coli ECRC99 0.32 KEDOAH_19790 ybaN DUF454 domain-containing protein 0.51 KEDOAH_26080 trpB tryptophan synthase subunit beta — —
Escherichia coli ECRC62 0.32 BNILDI_22525 ybaN DUF454 domain-containing protein 0.51 BNILDI_18475 trpB tryptophan synthase subunit beta low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.32 OHPLBJKB_03206 Inner membrane protein YbaN 0.51 OHPLBJKB_02422 Tryptophan synthase beta chain low > 73
Escherichia coli BL21 0.32 ECD_00419 DUF454 family inner membrane protein 0.51 ECD_01235 tryptophan synthase, beta subunit low > 61
Escherichia coli ECRC102 0.32 NIAGMN_06230 ybaN DUF454 domain-containing protein 0.51 NIAGMN_26840 trpB tryptophan synthase subunit beta — —
Castellaniella sp019104865 MT123 0.31 ABCV34_RS06460 YbaN family protein 0.65 ABCV34_RS08435 tryptophan synthase subunit beta — —
Escherichia coli ECRC101 0.31 MCAODC_27400 ybaN DUF454 domain-containing protein 0.51 MCAODC_15595 trpB tryptophan synthase subunit beta low > 87
Pantoea sp. MT58 0.29 IAI47_14485 DUF454 family protein 0.52 IAI47_09170 tryptophan synthase subunit beta low > 76
Bacteroides ovatus ATCC 8483 0.27 BACOVA_05259 hypothetical protein 0.52 BACOVA_03779 tryptophan synthase, beta subunit low > 94
Shewanella oneidensis MR-1 0.25 SO2011 conserved hypothetical protein (NCBI ptt file) 0.52 SO3023 trpB tryptophan synthase, beta subunit (NCBI ptt file) low > 76
Bacteroides thetaiotaomicron VPI-5482 0.25 BT4452 conserved hypothetical protein (NCBI ptt file) 0.52 BT0533 tryptophan synthase beta chain (NCBI ptt file) low > 81
Rhodanobacter denitrificans FW104-10B01 0.25 LRK54_RS06255 YbaN family protein 0.65 LRK54_RS01685 tryptophan synthase subunit beta low > 59
Rhodanobacter denitrificans MT42 0.25 LRK55_RS06000 YbaN family protein 0.65 LRK55_RS01465 tryptophan synthase subunit beta — —
Rahnella sp. WP5 0.24 EX31_RS22500 DUF454 family protein 0.51 EX31_RS09975 tryptophan synthase subunit beta low > 89
Serratia liquefaciens MT49 0.23 IAI46_05220 DUF454 family protein 0.52 IAI46_14040 tryptophan synthase subunit beta low > 86
Shewanella loihica PV-4 0.22 Shew_2237 hypothetical protein (RefSeq) 0.53 Shew_2255 tryptophan synthase subunit beta (RefSeq) low > 60
Pectobacterium carotovorum WPP14 0.21 HER17_RS15715 DUF454 family protein 0.53 HER17_RS10935 tryptophan synthase subunit beta low > 75
Dickeya dianthicola 67-19 0.21 HGI48_RS05820 DUF454 family protein 0.52 HGI48_RS10465 tryptophan synthase subunit beta — —
Dickeya dadantii 3937 0.20 DDA3937_RS05770 DUF454 family protein 0.52 DDA3937_RS10465 tryptophan synthase subunit beta low > 74
Shewanella sp. ANA-3 0.19 Shewana3_2448 hypothetical protein (RefSeq) 0.52 Shewana3_1516 tryptophan synthase subunit beta (RefSeq) low > 73
Dickeya dianthicola ME23 0.19 DZA65_RS06145 DUF454 family protein 0.52 DZA65_RS10945 tryptophan synthase subunit beta low > 75

Not shown: 1 genomes with orthologs for Psest_1866 only; 55 genomes with orthologs for Psest_0063 only