Conservation of cofitness between Psest_1866 and Psest_0062 in Pseudomonas stutzeri RCH2

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_1866 Uncharacterized protein conserved in bacteria 1.0 Psest_0062 tryptophan synthase, alpha subunit 0.21 13
Pseudomonas sp. S08-1 0.74 OH686_20660 Inner membrane protein YbaN 0.84 OH686_12430 tryptophan synthase, alpha subunit low > 80
Pseudomonas fluorescens SBW25 0.67 PFLU_RS21930 DUF454 domain-containing protein 0.85 PFLU_RS00175 tryptophan synthase subunit alpha low > 109
Pseudomonas fluorescens SBW25-INTG 0.67 PFLU_RS21930 DUF454 domain-containing protein 0.85 PFLU_RS00175 tryptophan synthase subunit alpha low > 109
Pseudomonas simiae WCS417 0.66 PS417_19960 membrane protein 0.85 PS417_00180 tryptophan synthase subunit alpha low > 88
Pseudomonas fluorescens FW300-N2E3 0.65 AO353_18420 hypothetical protein 0.86 AO353_10705 tryptophan synthase subunit alpha low > 101
Pseudomonas syringae pv. syringae B728a 0.65 Psyr_3740 Protein of unknown function DUF454 0.76 Psyr_0033 tryptophan synthase, alpha chain low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.65 Psyr_3740 Protein of unknown function DUF454 0.76 Psyr_0033 tryptophan synthase, alpha chain low > 86
Pseudomonas fluorescens GW456-L13 0.64 PfGW456L13_4425 FIG039061: hypothetical protein related to heme utilization 0.85 PfGW456L13_565 Tryptophan synthase alpha chain (EC 4.2.1.20) low > 87
Pseudomonas fluorescens FW300-N2C3 0.64 AO356_04060 hypothetical protein 0.83 AO356_10910 tryptophan synthase subunit alpha low > 104
Pseudomonas sp. RS175 0.63 PFR28_00786 Inner membrane protein YbaN 0.83 PFR28_04716 Tryptophan synthase alpha chain — —
Pseudomonas fluorescens FW300-N1B4 0.63 Pf1N1B4_3531 FIG039061: hypothetical protein related to heme utilization 0.85 Pf1N1B4_1830 Tryptophan synthase alpha chain (EC 4.2.1.20) low > 87
Pseudomonas putida KT2440 0.63 PP_4518 conserved protein of unknown function 0.76 PP_0082 tryptophan synthase alpha chain low > 96
Pseudomonas fluorescens FW300-N2E2 0.62 Pf6N2E2_2647 FIG039061: hypothetical protein related to heme utilization 0.84 Pf6N2E2_4047 Tryptophan synthase alpha chain (EC 4.2.1.20) low > 103
Enterobacter sp. TBS_079 0.33 MPMX20_01070 Inner membrane protein YbaN 0.27 MPMX20_02514 Tryptophan synthase alpha chain low > 85
Enterobacter asburiae PDN3 0.33 EX28DRAFT_2490 Uncharacterized protein conserved in bacteria 0.27 EX28DRAFT_0932 tryptophan synthase, alpha chain (EC 4.2.1.20) low > 76
Escherichia fergusonii Becca 0.32 EFB2_03590 Inner membrane protein YbaN 0.28 EFB2_02666 Tryptophan synthase alpha chain low > 86
Escherichia coli Nissle 1917 0.32 ECOLIN_RS02785 DUF454 family protein 0.29 ECOLIN_RS07595 tryptophan synthase subunit alpha — —
Klebsiella michiganensis M5al 0.32 BWI76_RS06810 hypothetical protein 0.28 BWI76_RS11840 tryptophan synthase subunit alpha low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.32 GFF4386 FIG039061: hypothetical protein related to heme utilization 0.29 GFF2726 Tryptophan synthase alpha chain (EC 4.2.1.20) low > 78
Vibrio cholerae E7946 ATCC 55056 0.32 CSW01_05355 DUF454 domain-containing protein 0.31 CSW01_05925 tryptophan synthase subunit alpha low > 62
Escherichia coli ECRC98 0.32 JDDGAC_11825 ybaN DUF454 domain-containing protein 0.29 JDDGAC_05220 trpA tryptophan synthase subunit alpha low > 86
Escherichia coli ECOR38 0.32 HEPCGN_06790 ybaN DUF454 domain-containing protein 0.28 HEPCGN_25515 trpA tryptophan synthase subunit alpha low > 87
Escherichia coli ECRC102 0.32 NIAGMN_06230 ybaN DUF454 domain-containing protein 0.29 NIAGMN_26845 trpA tryptophan synthase subunit alpha — —
Escherichia coli ECRC100 0.32 OKFHMN_08175 ybaN DUF454 domain-containing protein 0.29 OKFHMN_02675 trpA tryptophan synthase subunit alpha low > 80
Escherichia coli ECOR27 0.32 NOLOHH_01105 ybaN DUF454 domain-containing protein 0.29 NOLOHH_20335 trpA tryptophan synthase subunit alpha low > 75
Escherichia coli ECRC62 0.32 BNILDI_22525 ybaN DUF454 domain-containing protein 0.29 BNILDI_18480 trpA tryptophan synthase subunit alpha low > 75
Escherichia coli ECRC99 0.32 KEDOAH_19790 ybaN DUF454 domain-containing protein 0.29 KEDOAH_26075 trpA tryptophan synthase subunit alpha — —
Escherichia coli BL21 0.32 ECD_00419 DUF454 family inner membrane protein 0.29 ECD_01234 tryptophan synthase, alpha subunit low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.32 OHPLBJKB_03206 Inner membrane protein YbaN 0.29 OHPLBJKB_02423 Tryptophan synthase alpha chain low > 73
Escherichia coli BW25113 0.32 b0468 ybaN conserved inner membrane protein (NCBI) 0.29 b1260 trpA tryptophan synthase subunit alpha (NCBI) low > 76
Castellaniella sp019104865 MT123 0.31 ABCV34_RS06460 YbaN family protein 0.38 ABCV34_RS08430 tryptophan synthase subunit alpha — —
Escherichia coli ECRC101 0.31 MCAODC_27400 ybaN DUF454 domain-containing protein 0.29 MCAODC_15590 trpA tryptophan synthase subunit alpha low > 87
Pantoea sp. MT58 0.29 IAI47_14485 DUF454 family protein 0.27 IAI47_09165 tryptophan synthase subunit alpha low > 76
Bacteroides ovatus ATCC 8483 0.27 BACOVA_05259 hypothetical protein 0.25 BACOVA_03785 tryptophan synthase, alpha subunit low > 94
Shewanella oneidensis MR-1 0.25 SO2011 conserved hypothetical protein (NCBI ptt file) 0.30 SO3024 trpA tryptophan synthase, alpha subunit (NCBI ptt file) low > 76
Bacteroides thetaiotaomicron VPI-5482 0.25 BT4452 conserved hypothetical protein (NCBI ptt file) 0.26 BT0527 tryptophan synthase alpha chain (NCBI ptt file) low > 81
Rhodanobacter denitrificans MT42 0.25 LRK55_RS06000 YbaN family protein 0.40 LRK55_RS01460 tryptophan synthase subunit alpha — —
Rhodanobacter denitrificans FW104-10B01 0.25 LRK54_RS06255 YbaN family protein 0.40 LRK54_RS01680 tryptophan synthase, alpha subunit (EC 4.2.1.20) (from data) low > 59
Rahnella sp. WP5 0.24 EX31_RS22500 DUF454 family protein 0.27 EX31_RS09980 tryptophan synthase subunit alpha low > 89
Serratia liquefaciens MT49 0.23 IAI46_05220 DUF454 family protein 0.28 IAI46_14045 tryptophan synthase subunit alpha low > 86
Shewanella loihica PV-4 0.22 Shew_2237 hypothetical protein (RefSeq) 0.29 Shew_2256 trpA tryptophan synthase subunit alpha (RefSeq) low > 60
Pectobacterium carotovorum WPP14 0.21 HER17_RS15715 DUF454 family protein 0.28 HER17_RS10940 tryptophan synthase subunit alpha low > 75
Dickeya dianthicola 67-19 0.21 HGI48_RS05820 DUF454 family protein 0.28 HGI48_RS10460 tryptophan synthase subunit alpha — —
Dickeya dadantii 3937 0.20 DDA3937_RS05770 DUF454 family protein 0.27 DDA3937_RS10460 tryptophan synthase subunit alpha low > 74
Shewanella sp. ANA-3 0.19 Shewana3_2448 hypothetical protein (RefSeq) 0.29 Shewana3_1515 trpA tryptophan synthase subunit alpha (RefSeq) low > 73
Dickeya dianthicola ME23 0.19 DZA65_RS06145 DUF454 family protein 0.28 DZA65_RS10940 tryptophan synthase subunit alpha low > 75

Not shown: 1 genomes with orthologs for Psest_1866 only; 56 genomes with orthologs for Psest_0062 only